MGE detailed information
MGE type: Prophage MGE length: 33428 bp
Accession: NZ_CP026343 Location: 1400246..1433673 Organism: Escherichia coli strain 9A Replicon: chromosome
Accession: NZ_CP026343 Location: 1400246..1433673 Organism: Escherichia coli strain 9A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2R20_RS07345 () | 1396111..1397091 | + | 981 | WP_000019403.1 | IS5-like element IS5 family transposase | - |
| C2R20_RS07350 () | 1397364..1397621 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| C2R20_RS07355 () | 1397671..1398621 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| C2R20_RS07360 () | 1398773..1399525 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| C2R20_RS07365 () | 1399720..1400235 | - | 516 | WP_000945011.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| C2R20_RS07370 () | 1400246..1401772 | - | 1527 | WP_000062973.1 | p-aminobenzoyl-glutamate transporter | - |
| C2R20_RS07380 () | 1401809..1403254 | - | 1446 | WP_001156451.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| C2R20_RS07385 () | 1403254..1404564 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| C2R20_RS07390 () | 1404740..1405648 | + | 909 | WP_000885458.1 | LysR family transcriptional regulator | - |
| C2R20_RS07400 () | 1405978..1406541 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| C2R20_RS07405 () | 1406562..1407794 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| C2R20_RS24425 () | 1407988..1408035 | + | 48 | WP_211180494.1 | protein YnaN | - |
| C2R20_RS07410 () | 1408049..1409032 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| C2R20_RS07420 () | 1409510..1410883 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| C2R20_RS07425 () | 1411012..1411947 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| C2R20_RS07430 () | 1411999..1413234 | - | 1236 | WP_000040852.1 | hypothetical protein ; Integrase | Integrase |
| C2R20_RS07435 () | 1413236..1413451 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| C2R20_RS07440 () | 1413530..1413739 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1413555..1413733 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1413555..1413733 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1413555..1413733 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1413555..1413733 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| C2R20_RS07445 () | 1413732..1413926 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C2R20_RS07450 () | 1413983..1414792 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| C2R20_RS07455 () | 1414785..1417385 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| C2R20_RS07460 () | 1417487..1417762 | - | 276 | WP_000632297.1 | protein RacC | - |
| C2R20_RS07465 () | 1417837..1418007 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| C2R20_RS07470 () | 1418007..1418228 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| C2R20_RS07480 () | 1418670..1419158 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| C2R20_RS07485 () | 1419155..1419310 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| C2R20_RS07495 () | 1419764..1420240 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| C2R20_RS07500 () | 1420364..1420660 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| C2R20_RS07505 () | 1420683..1421105 | + | 423 | WP_000693797.1 | phage protein | - |
| C2R20_RS07510 () | 1421118..1421975 | + | 858 | WP_000899748.1 | DUF1376 domain-containing protein | - |
| C2R20_RS07515 () | 1421982..1422728 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| C2R20_RS07520 () | 1422751..1423203 | + | 453 | Protein_1366 | DUF1627 domain-containing protein | - |
| C2R20_RS07525 () | 1423399..1423584 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| C2R20_RS07530 () | 1423781..1425238 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| C2R20_RS07540 () | 1425376..1425639 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| C2R20_RS07545 () | 1425620..1425979 | + | 360 | WP_000091628.1 | hypothetical protein | - |
| C2R20_RS07555 () | 1426453..1427385 | + | 933 | Protein_1371 | phage tail length tape measure family protein | - |
| C2R20_RS07560 () | 1427388..1427603 | + | 216 | Protein_1372 | Ail/Lom family outer membrane beta-barrel protein | - |
| C2R20_RS07570 () | 1427745..1428725 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| C2R20_RS07575 () | 1428795..1428983 | + | 189 | Protein_1374 | Ail/Lom family outer membrane beta-barrel protein | - |
| C2R20_RS07580 () | 1429048..1432410 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C2R20_RS07585 () | 1432410..1432985 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| C2R20_RS07590 () | 1433083..1433673 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| C2R20_RS07595 () | 1433990..1434223 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| C2R20_RS24135 () | 1434292..1434405 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| C2R20_RS07600 () | 1435184..1435618 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| C2R20_RS07605 () | 1435759..1436892 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0.003 |