MGE detailed information
MGE type: IScluster/Tn MGE length: 23240 bp
Accession: NZ_CP026099 Location: 5523..28762 Organism: Shigella flexneri strain FDAARGOS_74 Replicon: plasmid unnamed
Accession: NZ_CP026099 Location: 5523..28762 Organism: Shigella flexneri strain FDAARGOS_74 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MC63_RS23510 (MC63_024620) | 1780..2682 | + | 903 | WP_128567749.1 | DUF1281 domain-containing protein | - |
| MC63_RS23515 (MC63_024625) | 2679..2990 | + | 312 | WP_040236035.1 | hypothetical protein | - |
| MC63_RS23520 (MC63_024630) | 3054..3737 | + | 684 | WP_000086135.1 | DNA methylase | - |
| MC63_RS23525 (MC63_024635) | 3738..3959 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| MC63_RS23530 (MC63_024640) | 3919..4405 | + | 487 | Protein_6 | DUF1380 domain-containing protein | - |
| MC63_RS23535 (MC63_024645) | 4450..5220 | + | 771 | WP_047563977.1 | hypothetical protein | - |
| MC63_RS23545 (MC63_024655) | 5523..6278 | - | 756 | Protein_8 | IS110 family transposase ISSfl8 | Transposase |
| MC63_RS23550 (MC63_024660) | 6287..7887 | - | 1601 | Protein_9 | IS66 family transposase ISSfl3 | Transposase |
| MC63_RS23555 (MC63_024665) | 7907..8254 | - | 348 | WP_000631711.1 | IS66 family transposase ISSfl3 | Transposase |
| MC63_RS23560 (MC63_024670) | 8251..8538 | - | 288 | Protein_11 | IS66 family transposase ISSfl3 | Transposase |
| MC63_RS23565 (MC63_024675) | 8580..9789 | - | 1210 | Protein_12 | IS3 family transposase | - |
| MC63_RS23570 (MC63_024680) | 9842..10234 | - | 393 | Protein_13 | IS66 family transposase ISSfl3 | Transposase |
| MC63_RS23580 (MC63_024690) | 10433..10903 | + | 471 | Protein_14 | IS1 family transposase IS1N | Transposase |
| MC63_RS25390 | 11062..11700 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| MC63_RS23590 | 11815..12084 | + | 270 | Protein_16 | IS3 family transposase ISEc48 | Transposase |
| MC63_RS23595 (MC63_024710) | 12172..13214 | + | 1043 | Protein_17 | IS3 family transposase IS2 | Transposase |
| MC63_RS23600 (MC63_024715) | 13294..13967 | + | 674 | Protein_18 | IS66 family transposase ISSfl3 | Transposase |
| MC63_RS23605 (MC63_024720) | 13964..14311 | + | 348 | WP_000631711.1 | IS66 family transposase ISSfl3 | Transposase |
| MC63_RS23610 (MC63_024725) | 14331..15931 | + | 1601 | Protein_20 | IS66 family transposase ISSfl3 | Transposase |
| MC63_RS23615 (MC63_024730) | 16116..16301 | + | 186 | Protein_21 | IS21 family transposase IS100 | Transposase |
| MC63_RS23620 (MC63_024735) | 16427..17124 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| MC63_RS23625 (MC63_024740) | 17178..17387 | - | 210 | Protein_23 | peptidoglycan-binding protein | - |
| MC63_RS23630 (MC63_024745) | 17437..17688 | - | 252 | WP_001381727.1 | transporter | - |
| MC63_RS23645 (MC63_024760) | 18912..19865 | + | 954 | Protein_26 | IS66 family transposase ISEc49 | Transposase |
| MC63_RS23650 (MC63_024765) | 20401..20619 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| MC63_RS23655 (MC63_024770) | 20621..20926 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| MC63_RS23660 | 20950..21057 | + | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| MC63_RS23665 (MC63_024780) | 21319..22956 | + | 1638 | WP_039060807.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| MC63_RS23670 (MC63_024785) | 23164..23433 | + | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| MC63_RS25920 | 23433..23602 | + | 170 | Protein_32 | type II toxin-antitoxin system toxin YacB | - |
| MC63_RS23680 (MC63_024795) | 23685..24275 | + | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| MC63_RS23685 (MC63_024800) | 24394..25550 | + | 1157 | WP_094099548.1 | IS3 family transposase ISSd1 | Transposase |
| MC63_RS23690 (MC63_024810) | 25899..26165 | + | 267 | Protein_35 | IS66 family transposase ISCro1 | Transposase |
| MC63_RS23695 (MC63_024815) | 26228..27496 | + | 1269 | Protein_36 | IS4 family transposase IS4 | Transposase |
| MC63_RS23700 (MC63_024820) | 27553..28762 | + | 1210 | Protein_37 | IS3 family transposase | - |
| MC63_RS25925 | 28803..28883 | + | 81 | Protein_38 | hypothetical protein | - |
| MC63_RS25930 (MC63_024825) | 28897..29089 | - | 193 | Protein_39 | IS66 family insertion sequence element accessory protein TnpB | - |
| MC63_RS23710 (MC63_024830) | 29087..29411 | + | 325 | Protein_40 | IS3 family transposase | - |
| MC63_RS23715 (MC63_024835) | 29441..32353 | - | 2913 | WP_164838197.1 | ankyrin repeat domain-containing protein | - |
| MC63_RS23725 (MC63_024850) | 32836..33678 | + | 843 | WP_050900308.1 | polysaccharide deacetylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|