MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_CP026028 Location: 3265877..3286808 Organism: Escherichia coli strain CIT Replicon: chromosome
Accession: NZ_CP026028 Location: 3265877..3286808 Organism: Escherichia coli strain CIT Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H83_RS16950 () | 3261709..3263040 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| C2H83_RS16955 () | 3263062..3264051 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| C2H83_RS16965 () | 3264150..3265088 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| C2H83_RS24410 () | 3265403..3265621 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| C2H83_RS16975 () | 3265877..3266416 | + | 540 | WP_000675733.1 | hypothetical protein | - |
| C2H83_RS16980 () | 3266438..3267625 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| C2H83_RS16990 () | 3268648..3269793 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| C2H83_RS16995 () | 3269890..3270780 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| C2H83_RS17000 () | 3270810..3271580 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| C2H83_RS17005 () | 3271596..3272930 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| C2H83_RS17010 () | 3273305..3274876 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| C2H83_RS17015 () | 3275025..3275360 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| C2H83_RS17020 () | 3275360..3275824 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| C2H83_RS17025 () | 3275879..3276688 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| C2H83_RS17035 () | 3276937..3278217 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| C2H83_RS17040 () | 3278240..3278713 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| C2H83_RS17045 () | 3278724..3279095 | + | 372 | Protein_3116 | PTS sugar transporter subunit IIC | - |
| C2H83_RS17050 () | 3279091..3279648 | + | 558 | Protein_3117 | amidohydrolase family protein | - |
| C2H83_RS17055 () | 3279999..3281153 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| C2H83_RS17060 () | 3281166..3282026 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| C2H83_RS17065 () | 3282193..3282669 | + | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| C2H83_RS17070 () | 3282708..3283511 | + | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| C2H83_RS17075 () | 3283501..3284292 | + | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| C2H83_RS17080 () | 3284293..3285048 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| C2H83_RS17085 () | 3285449..3286033 | + | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| C2H83_RS17090 () | 3286113..3286808 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| C2H83_RS17095 () | 3286837..3289353 | + | 2517 | WP_001355538.1 | fimbrial biogenesis outer membrane usher protein | - |
| C2H83_RS17100 () | 3289364..3290455 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| C2H83_RS17105 () | 3290498..3291358 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|