MGE detailed information
MGE type: Genomic_island MGE length: 75020 bp
Accession: NZ_CP025903 Location: 476376..551395 Organism: Escherichia coli strain 300709 Replicon: chromosome
Accession: NZ_CP025903 Location: 476376..551395 Organism: Escherichia coli strain 300709 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXV43_RS02295 () | 471897..472364 | + | 468 | WP_000725257.1 | flagellar basal body-associated FliL family protein | - |
| CXV43_RS02300 () | 472384..473100 | + | 717 | WP_000938723.1 | FliA/WhiG family RNA polymerase sigma factor | - |
| CXV43_RS02305 () | 473113..473976 | + | 864 | WP_001169518.1 | flagellar motor stator protein MotA | - |
| CXV43_RS02310 () | 473979..474902 | + | 924 | WP_001232546.1 | putative lateral flagellar export/assembly protein LafU | - |
| CXV43_RS02315 () | 474973..476028 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| CXV43_RS02320 () | 476080..476373 | + | 294 | WP_001412607.1 | type I toxin-antitoxin system antitoxin YafN | - |
| CXV43_RS02325 () | 476376..476774 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | - |
| CXV43_RS02330 () | 476784..477236 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| CXV43_RS02335 () | 477554..477760 | + | 207 | Protein_453 | RtcB family protein | - |
| CXV43_RS02340 () | 477756..478277 | + | 522 | Protein_454 | peptide chain release factor H | - |
| CXV43_RS02345 () | 478334..479791 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| CXV43_RS02350 () | 480052..480510 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| CXV43_RS02355 () | 480602..481846 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 481106..481186 | + | 81 | NuclAT_12 | - | - |
| - () | 481106..481186 | + | 81 | NuclAT_12 | - | - |
| - () | 481106..481186 | + | 81 | NuclAT_12 | - | - |
| - () | 481106..481186 | + | 81 | NuclAT_12 | - | - |
| CXV43_RS02360 () | 481904..482305 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| CXV43_RS02365 () | 482344..483399 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| CXV43_RS02370 () | 483687..484790 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CXV43_RS02375 () | 484802..486055 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CXV43_RS02385 () | 486409..487617 | + | 1209 | WP_000772656.1 | Prophage integrase IntS ; Integrase | Integrase |
| CXV43_RS02390 () | 487859..489067 | + | 1209 | WP_001375306.1 | type I restriction-modification system subunit M | - |
| CXV43_RS02395 () | 489060..490766 | + | 1707 | WP_000132879.1 | zinc ribbon domain-containing protein | - |
| CXV43_RS02400 () | 490744..491814 | + | 1071 | WP_001736892.1 | hypothetical protein | - |
| CXV43_RS02405 () | 492015..492704 | - | 690 | Protein_466 | IS1 family transposase | - |
| CXV43_RS02410 () | 492847..494346 | - | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| CXV43_RS02415 () | 494421..496790 | - | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| CXV43_RS02420 () | 496895..498364 | - | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| CXV43_RS02425 () | 498617..499310 | + | 694 | Protein_470 | IS1 family transposase IS1N | Transposase |
| CXV43_RS02435 () | 499613..499915 | - | 303 | WP_097330448.1 | transposase | - |
| CXV43_RS02445 () | 500249..500683 | - | 435 | WP_001221614.1 | zinc-ribbon domain-containing protein | - |
| CXV43_RS02450 () | 500671..501072 | - | 402 | WP_001736894.1 | hypothetical protein | - |
| CXV43_RS25140 () | 501159..501299 | - | 141 | WP_001736895.1 | hypothetical protein | - |
| CXV43_RS02460 () | 501454..502053 | - | 600 | WP_001099652.1 | inovirus-type Gp2 protein | - |
| CXV43_RS02465 () | 502285..502497 | - | 213 | WP_000453335.1 | hemolysin expression modulator Hha | - |
| CXV43_RS02470 () | 503451..504242 | + | 792 | WP_001405552.1 | hypothetical protein | - |
| CXV43_RS02480 () | 504626..504832 | + | 207 | WP_000211310.1 | AlpA family transcriptional regulator | - |
| CXV43_RS02485 () | 504920..505528 | + | 609 | WP_000782650.1 | hypothetical protein | - |
| CXV43_RS02515 () | 507238..507450 | + | 213 | WP_000343903.1 | hypothetical protein | - |
| CXV43_RS02520 () | 507971..508597 | + | 627 | WP_001405554.1 | hypothetical protein | - |
| CXV43_RS02525 () | 508737..509411 | - | 675 | WP_001203107.1 | DUF2971 domain-containing protein | - |
| CXV43_RS02530 () | 509706..510578 | + | 873 | WP_001069764.1 | GTPase family protein | - |
| CXV43_RS02535 () | 510866..512062 | + | 1197 | WP_039023277.1 | IS110 family transposase ISEc20 | Transposase |
| CXV43_RS02540 () | 512401..515247 | + | 2847 | WP_126125379.1 | Ag43/Cah family autotransporter adhesin | - |
| CXV43_RS02545 () | 515318..515551 | + | 234 | WP_001117560.1 | DUF905 family protein | - |
| CXV43_RS02550 () | 515642..516460 | + | 819 | WP_001234749.1 | DUF945 domain-containing protein | - |
| CXV43_RS02555 () | 516552..517037 | + | 486 | WP_001737493.1 | antirestriction protein | - |
| CXV43_RS02560 () | 517053..517529 | + | 477 | WP_126125380.1 | RadC family protein | - |
| CXV43_RS02565 () | 517592..517813 | + | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| CXV43_RS02570 () | 517832..518476 | + | 645 | WP_000086755.1 | hypothetical protein | - |
| CXV43_RS02575 () | 518580..518885 | + | 306 | WP_077249034.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CXV43_RS02580 () | 518906..519274 | + | 369 | WP_001094399.1 | TA system toxin CbtA family protein | Toxin Detail |
| CXV43_RS02585 () | 519595..519933 | - | 339 | Protein_494 | LysR family transcriptional regulator | - |
| CXV43_RS02590 () | 519984..520940 | - | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| CXV43_RS02595 () | 520950..523148 | - | 2199 | WP_001736897.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| CXV43_RS02600 () | 523145..524101 | - | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| CXV43_RS02605 () | 524098..524787 | - | 690 | WP_000070700.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| CXV43_RS02610 () | 525205..525819 | + | 615 | WP_001019920.1 | YagU family protein | - |
| CXV43_RS02615 () | 526067..526396 | - | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| CXV43_RS02620 () | 526709..527419 | - | 711 | WP_001360105.1 | putative fimbrial chaperone EcpE | VF |
| CXV43_RS02625 () | 527388..529031 | - | 1644 | WP_001310578.1 | Fimbria adhesin EcpD | VF |
| CXV43_RS02630 () | 529021..531546 | - | 2526 | WP_001131096.1 | putative outer membrane usher protein EcpC | VF |
| CXV43_RS02635 () | 531572..532240 | - | 669 | WP_000716398.1 | putative fimbrial chaperone EcpB | VF |
| CXV43_RS02640 () | 532449..533561 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| CXV43_RS02645 () | 533647..534234 | - | 588 | WP_000730972.1 | Common pilus major fimbrillin subunit EcpA | VF |
| CXV43_RS02650 () | 534309..534851 | - | 543 | WP_001301257.1 | HTH-type transcriptional regulator EcpR | VF |
| CXV43_RS02655 () | 535675..535902 | + | 228 | WP_001147279.1 | hypothetical protein | - |
| CXV43_RS02660 () | 535937..536077 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| CXV43_RS02665 () | 536077..536340 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| CXV43_RS02670 () | 536704..536805 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| CXV43_RS02680 () | 537920..542176 | + | 4257 | WP_000020219.1 | Invasin | VF |
| CXV43_RS02685 () | 542316..543167 | - | 852 | WP_000621009.1 | Right origin-binding protein | VF |
| CXV43_RS02690 () | 543470..543598 | + | 129 | Protein_514 | aldo/keto reductase | - |
| CXV43_RS02695 () | 543757..544350 | - | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| CXV43_RS02700 () | 544362..544598 | - | 237 | WP_000474084.1 | DUF1471 domain-containing protein | - |
| CXV43_RS02705 () | 544707..546032 | - | 1326 | WP_001046307.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| CXV43_RS02710 () | 546258..547112 | + | 855 | WP_000339594.1 | DNA-binding transcriptional regulator RclR | - |
| CXV43_RS02715 () | 547639..548358 | + | 720 | WP_001412641.1 | (Fe-S)-binding protein | - |
| CXV43_RS02720 () | 548369..549796 | + | 1428 | WP_001736901.1 | iron-sulfur cluster-binding protein | - |
| CXV43_RS02725 () | 549789..550484 | + | 696 | WP_000370307.1 | lactate utilization protein C | - |
| CXV43_RS02730 () | 550727..551395 | - | 669 | WP_001209100.1 | hypothetical protein | - |
| CXV43_RS02735 () | 551608..553278 | - | 1671 | WP_001159094.1 | choline dehydrogenase | - |
| CXV43_RS02740 () | 553292..554764 | - | 1473 | WP_000089110.1 | betaine-aldehyde dehydrogenase | - |
| CXV43_RS02745 () | 554778..555365 | - | 588 | WP_001335745.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|