MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 151604 bp
Accession: NZ_CP025881 Location: 2244874..2396477 Organism: Escherichia coli strain 503440 Replicon: chromosome
Accession: NZ_CP025881 Location: 2244874..2396477 Organism: Escherichia coli strain 503440 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXX05_RS11285 () | 2239939..2240955 | - | 1017 | WP_000582977.1 | phosphate acetyltransferase | - |
| CXX05_RS11290 () | 2240952..2241755 | - | 804 | WP_000651298.1 | ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT | - |
| CXX05_RS11295 () | 2241752..2242453 | - | 702 | WP_000733906.1 | ethanolamine utilization acetate kinase EutQ | - |
| CXX05_RS11300 () | 2242428..2242907 | - | 480 | WP_000820764.1 | ethanolamine utilization acetate kinase EutP | - |
| CXX05_RS11305 () | 2242920..2243255 | - | 336 | WP_000356956.1 | ethanolamine utilization microcompartment protein EutS | - |
| CXX05_RS11310 () | 2243470..2244167 | - | 698 | Protein_2159 | IS1 family transposase | - |
| CXX05_RS11315 () | 2244325..2246604 | - | 2280 | WP_000342642.1 | NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase | - |
| CXX05_RS11320 () | 2246893..2247843 | + | 951 | WP_001716810.1 | transaldolase | - |
| CXX05_RS11325 () | 2247863..2249866 | + | 2004 | WP_001297319.1 | transketolase | - |
| CXX05_RS11330 () | 2249962..2251005 | - | 1044 | WP_001270524.1 | DUF1176 domain-containing protein | - |
| CXX05_RS11335 () | 2251131..2251706 | - | 576 | WP_000193711.1 | GDP-mannose pyrophosphatase NudK | - |
| CXX05_RS11340 () | 2251774..2253753 | - | 1980 | WP_024171812.1 | formate-dependent uric acid utilization protein AegA | - |
| CXX05_RS11345 () | 2253959..2255659 | + | 1701 | WP_000636129.1 | nitrate/nitrite two-component system sensor histidine kinase NarQ | - |
| CXX05_RS11350 () | 2255823..2258936 | + | 3114 | WP_001273141.1 | Multidrug efflux pump subunit AcrB | VF |
| CXX05_RS11355 () | 2259035..2259094 | - | 60 | WP_001386977.1 | protein YpfM | - |
| CXX05_RS11360 () | 2259475..2259831 | + | 357 | WP_000258247.1 | ArsC family reductase | - |
| CXX05_RS11365 () | 2259835..2260962 | + | 1128 | WP_001277809.1 | succinyl-diaminopimelate desuccinylase | - |
| CXX05_RS11370 () | 2260990..2261190 | + | 201 | WP_000383836.1 | YpfN family protein | - |
| CXX05_RS11375 () | 2261300..2261998 | - | 699 | WP_000679812.1 | esterase | - |
| CXX05_RS11380 () | 2262072..2264087 | - | 2016 | WP_000829332.1 | tRNA cytosine(34) acetyltransferase TmcA | - |
| CXX05_RS11385 () | 2264102..2264965 | - | 864 | WP_001267507.1 | neutral zinc metallopeptidase | - |
| CXX05_RS11390 () | 2265112..2265510 | - | 399 | WP_000911329.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| CXX05_RS11395 () | 2265510..2265737 | - | 228 | WP_000450524.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| CXX05_RS11400 () | 2265893..2266606 | - | 714 | WP_001295467.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| CXX05_RS11405 () | 2266819..2267853 | - | 1035 | WP_001297320.1 | outer membrane protein assembly factor BamC | - |
| CXX05_RS11410 () | 2267870..2268748 | - | 879 | WP_001295469.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| CXX05_RS11415 () | 2268894..2269466 | + | 573 | WP_000176187.1 | glycine cleavage system transcriptional repressor | - |
| CXX05_RS11420 () | 2269466..2269936 | + | 471 | WP_001068682.1 | thioredoxin-dependent thiol peroxidase | - |
| CXX05_RS11425 () | 2270189..2270806 | + | 618 | WP_001295470.1 | hydrogenase 4 subunit HyfA | - |
| CXX05_RS11430 () | 2270806..2272823 | + | 2018 | Protein_2183 | hydrogenase 4 subunit B | - |
| CXX05_RS11435 () | 2272834..2273778 | + | 945 | WP_001297317.1 | hydrogenase 4 subunit HyfC | - |
| CXX05_RS11440 () | 2273795..2273905 | + | 111 | WP_000429115.1 | hypothetical protein | - |
| CXX05_RS11445 () | 2273917..2275024 | + | 1108 | Protein_2186 | hydrogenase 4 subunit D | - |
| CXX05_RS11450 () | 2275036..2275686 | + | 651 | WP_000147987.1 | hydrogenase 4 membrane subunit | - |
| CXX05_RS11455 () | 2275691..2277270 | + | 1580 | Protein_2188 | hydrogenase 4 subunit F | - |
| CXX05_RS11460 () | 2277260..2278975 | + | 1716 | WP_001297839.1 | hydrogenase 4 catalytic subunit HyfG | - |
| CXX05_RS11465 () | 2278985..2279524 | + | 540 | WP_000916082.1 | hydrogenase 4 subunit H | - |
| CXX05_RS11470 () | 2279521..2280279 | + | 759 | WP_001297696.1 | hydrogenase 4 catalytic subunit HyfI | - |
| CXX05_RS11475 () | 2280272..2280685 | + | 414 | WP_000796789.1 | hydrogenase 4 assembly chaperone HyfJ | - |
| CXX05_RS11480 () | 2280715..2282727 | + | 2013 | WP_001251558.1 | DNA-binding transcriptional activator HyfR | VF |
| CXX05_RS11485 () | 2282749..2283480 | + | 732 | WP_001244769.1 | formate transporter | - |
| CXX05_RS11490 () | 2283372..2283596 | + | 225 | WP_001330935.1 | formate/nitrite transporter family protein | - |
| CXX05_RS11495 () | 2283634..2284695 | - | 1062 | WP_000892044.1 | AI-2E family transporter | - |
| CXX05_RS11500 () | 2284908..2286371 | + | 1464 | WP_000489667.1 | beta-barrel assembly-enhancing protease | - |
| CXX05_RS11505 () | 2286392..2286751 | + | 360 | WP_000166449.1 | arsenate reductase (glutaredoxin) | - |
| CXX05_RS11510 () | 2286889..2287635 | - | 747 | WP_000247065.1 | DnaA inactivator Hda | - |
| CXX05_RS11515 () | 2287685..2288974 | - | 1290 | WP_000198328.1 | uracil permease | - |
| CXX05_RS11520 () | 2289060..2289686 | - | 627 | WP_001295473.1 | uracil phosphoribosyltransferase | - |
| CXX05_RS11525 () | 2290011..2291048 | + | 1038 | WP_001295474.1 | Phosphoribosylformylglycinamidine cyclo-ligase | VF |
| CXX05_RS11530 () | 2291048..2291686 | + | 639 | WP_001028614.1 | phosphoribosylglycinamide formyltransferase | - |
| CXX05_RS11535 () | 2291857..2293923 | + | 2067 | WP_000529576.1 | polyphosphate kinase 1 | - |
| CXX05_RS11540 () | 2293928..2295469 | + | 1542 | WP_001121363.1 | exopolyphosphatase | - |
| CXX05_RS11545 () | 2295508..2297751 | - | 2244 | WP_000772775.1 | Cyclic di-GMP phosphodiesterase PdeF | VF |
| CXX05_RS26740 () | 2297933..2298085 | - | 153 | WP_000017552.1 | hypothetical protein | - |
| CXX05_RS11550 () | 2298103..2298294 | + | 192 | WP_000076001.1 | DUF2633 family protein | - |
| CXX05_RS11555 () | 2298605..2299123 | + | 519 | WP_001295476.1 | glycine zipper 2TM domain-containing protein | - |
| CXX05_RS11560 () | 2299139..2299513 | + | 375 | WP_001716815.1 | DUF5384 family protein | - |
| CXX05_RS11570 () | 2299564..2300346 | - | 783 | WP_014640011.1 | IS21 family transposase IS100kyp | Transposase |
| CXX05_RS11575 () | 2300343..2301365 | - | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| CXX05_RS11585 () | 2301452..2301637 | + | 186 | Protein_2213 | DUF5384 family protein | - |
| CXX05_RS11590 () | 2301831..2302028 | - | 198 | WP_001297329.1 | hypothetical protein | - |
| CXX05_RS11595 () | 2302090..2303880 | - | 1791 | WP_001297331.1 | ATP-binding protein | - |
| CXX05_RS11600 () | 2303888..2304964 | - | 1077 | WP_001297336.1 | SIR2 family protein | - |
| CXX05_RS11610 () | 2305701..2305910 | + | 210 | WP_000101768.1 | hypothetical protein | - |
| CXX05_RS11615 () | 2305913..2306137 | + | 225 | WP_001716819.1 | hypothetical protein | - |
| CXX05_RS11620 () | 2306408..2307199 | + | 792 | WP_001297334.1 | P-type conjugative transfer protein TrbJ | - |
| CXX05_RS11625 () | 2307202..2307384 | + | 183 | WP_024171813.1 | hypothetical protein | - |
| CXX05_RS11630 () | 2307426..2308925 | + | 1500 | WP_021542195.1 | P-type conjugative transfer protein TrbL | - |
| CXX05_RS11635 () | 2309092..2309400 | + | 309 | WP_001297325.1 | hypothetical protein | - |
| CXX05_RS26745 () | 2310141..2310377 | - | 237 | WP_187440167.1 | hypothetical protein | - |
| CXX05_RS11645 () | 2310707..2311765 | - | 1059 | WP_001297333.1 | replication initiator protein A | - |
| CXX05_RS11650 () | 2311846..2312076 | - | 231 | WP_021542196.1 | AlpA family phage regulatory protein | - |
| CXX05_RS11655 () | 2312359..2313567 | - | 1209 | WP_001297323.1 | Prophage integrase IntA ; Integrase | Integrase |
| CXX05_RS11660 () | 2313876..2315453 | - | 1578 | WP_000138282.1 | glutamine-hydrolyzing GMP synthase | - |
| CXX05_RS11665 () | 2315522..2316988 | - | 1467 | WP_001299507.1 | IMP dehydrogenase | - |
| CXX05_RS11670 () | 2317150..2318520 | + | 1371 | WP_000937933.1 | exodeoxyribonuclease VII large subunit | - |
| CXX05_RS11675 () | 2318517..2318732 | - | 216 | WP_001297332.1 | zinc ribbon domain-containing protein | - |
| CXX05_RS11680 () | 2318801..2320273 | - | 1473 | WP_000249410.1 | ribosome biogenesis GTPase Der | - |
| CXX05_RS11685 () | 2320391..2321569 | - | 1179 | WP_001177043.1 | outer membrane protein assembly factor BamB | - |
| CXX05_RS11690 () | 2321580..2322200 | - | 621 | WP_000409205.1 | ancillary SecYEG translocon subunit YfgM | - |
| CXX05_RS11695 () | 2322218..2323492 | - | 1275 | WP_001107167.1 | histidine--tRNA ligase | - |
| CXX05_RS11700 () | 2323603..2324721 | - | 1119 | WP_000551807.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
| CXX05_RS11705 () | 2324748..2325761 | - | 1014 | WP_001090850.1 | cytoskeleton protein RodZ | - |
| CXX05_RS11710 () | 2326046..2327200 | - | 1155 | WP_000003317.1 | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | - |
| CXX05_RS11715 () | 2327350..2327781 | - | 432 | WP_000963837.1 | nucleoside-diphosphate kinase | - |
| CXX05_RS11720 () | 2327930..2330242 | - | 2313 | WP_001137658.1 | peptidoglycan glycosyltransferase PbpC | - |
| CXX05_RS11725 () | 2330243..2335204 | - | 4962 | WP_001297326.1 | alpha2-macroglobulin | - |
| CXX05_RS11730 () | 2335411..2336256 | + | 846 | WP_001297330.1 | 3-mercaptopyruvate sulfurtransferase | - |
| CXX05_RS11735 () | 2336749..2337525 | - | 777 | WP_001297328.1 | enhanced serine sensitivity protein SseB | - |
| CXX05_RS11740 () | 2337667..2338950 | - | 1284 | WP_000133579.1 | aminopeptidase PepB | - |
| CXX05_RS11745 () | 2339128..2339328 | - | 201 | WP_000523616.1 | Fe-S cluster assembly protein IscX | - |
| CXX05_RS11750 () | 2339340..2339675 | - | 336 | WP_001124469.1 | ISC system 2Fe-2S type ferredoxin | - |
| CXX05_RS11755 () | 2339677..2341527 | - | 1851 | WP_001196613.1 | Fe-S protein assembly chaperone HscA | - |
| CXX05_RS11760 () | 2341544..2342059 | - | 516 | WP_000384411.1 | co-chaperone HscB | - |
| CXX05_RS11765 () | 2342155..2342478 | - | 324 | WP_000028953.1 | iron-sulfur cluster assembly protein IscA | - |
| CXX05_RS11770 () | 2342495..2342881 | - | 387 | WP_000331707.1 | Fe-S cluster assembly scaffold IscU | - |
| CXX05_RS11775 () | 2342909..2344123 | - | 1215 | WP_001295373.1 | cysteine desulfurase | - |
| CXX05_RS11780 () | 2344235..2344723 | - | 489 | WP_001241356.1 | Fe-S cluster assembly transcriptional regulator IscR | - |
| CXX05_RS11785 () | 2345024..2345761 | - | 738 | WP_000940018.1 | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | - |
| CXX05_RS11790 () | 2345880..2346683 | + | 804 | WP_000553451.1 | inositol-1-monophosphatase | - |
| CXX05_RS11795 () | 2346828..2347682 | + | 855 | WP_001297705.1 | alpha/beta hydrolase | - |
| CXX05_RS11800 () | 2347873..2349153 | + | 1281 | WP_000983009.1 | stationary phase inducible protein CsiE | - |
| CXX05_RS11805 () | 2349145..2350284 | - | 1140 | WP_000244191.1 | 3-phenylpropionate MFS transporter | - |
| CXX05_RS11810 () | 2350444..2351334 | - | 891 | WP_000423257.1 | DNA-binding transcriptional regulator HcaR | - |
| CXX05_RS11815 () | 2351470..2352831 | + | 1362 | WP_000211172.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| CXX05_RS11820 () | 2352828..2353346 | + | 519 | WP_001276072.1 | 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | - |
| CXX05_RS11825 () | 2353346..2353666 | + | 321 | WP_001080102.1 | bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | - |
| CXX05_RS11830 () | 2353663..2354475 | + | 813 | WP_001281377.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | - |
| CXX05_RS11835 () | 2354485..2355681 | + | 1197 | WP_000660795.1 | phenylpropionate dioxygenase ferredoxin reductase subunit | - |
| CXX05_RS11840 () | 2355778..2356200 | + | 423 | WP_001094726.1 | DoxX family protein | - |
| CXX05_RS11845 () | 2356248..2357120 | - | 873 | WP_000158547.1 | aldose 1-epimerase | - |
| CXX05_RS11850 () | 2357132..2358226 | - | 1095 | WP_000700800.1 | zinc-binding dehydrogenase | - |
| CXX05_RS11855 () | 2358259..2359257 | - | 999 | WP_001297609.1 | ABC transporter permease | - |
| CXX05_RS11860 () | 2359282..2360793 | - | 1512 | WP_000493471.1 | sugar ABC transporter ATP-binding protein | - |
| CXX05_RS11865 () | 2360816..2361799 | - | 984 | WP_001124909.1 | substrate-binding domain-containing protein | - |
| CXX05_RS11870 () | 2361896..2365177 | - | 3282 | WP_001297611.1 | DUF5107 domain-containing protein | - |
| CXX05_RS11875 () | 2365295..2366488 | + | 1194 | WP_001297610.1 | ROK family protein | - |
| CXX05_RS11880 () | 2366552..2367805 | - | 1254 | WP_000919159.1 | serine hydroxymethyltransferase | - |
| CXX05_RS11885 () | 2368133..2369323 | + | 1191 | WP_000883124.1 | NO-inducible flavohemoprotein | - |
| CXX05_RS11890 () | 2369368..2369706 | - | 339 | WP_000717694.1 | nitrogen regulatory protein P-II | - |
| CXX05_RS11895 () | 2369767..2371101 | - | 1335 | WP_001298983.1 | Transcriptional regulatory protein GlrR | VF |
| CXX05_RS11900 () | 2371091..2371804 | - | 714 | WP_001215888.1 | two-component system QseEF-associated lipoprotein QseG | - |
| CXX05_RS11905 () | 2371969..2373396 | - | 1428 | WP_001297612.1 | two component system sensor histidine kinase QseE/GlrK | - |
| CXX05_RS11910 () | 2373972..2377859 | - | 3888 | WP_000970115.1 | phosphoribosylformylglycinamidine synthase | - |
| CXX05_RS11915 () | 2378117..2379673 | + | 1557 | WP_000734193.1 | membrane-bound lytic murein transglycosylase MltF | - |
| CXX05_RS11920 () | 2379670..2380206 | - | 537 | WP_001295367.1 | tRNA adenosine(34) deaminase TadA | - |
| CXX05_RS11925 () | 2380231..2380866 | - | 636 | WP_000190655.1 | phosphatidylglycerophosphatase C | - |
| CXX05_RS11930 () | 2381075..2381923 | + | 849 | WP_001013780.1 | MurR/RpiR family transcriptional regulator | - |
| CXX05_RS11935 () | 2381979..2382239 | + | 261 | WP_001196283.1 | 4Fe-4S dicluster ferredoxin YfhL | - |
| CXX05_RS11940 () | 2382433..2382513 | - | 81 | WP_000128776.1 | type I toxin-antitoxin system toxin ShoB | - |
| - () | 2382836..2382912 | + | 77 | NuclAT_11 | - | - |
| - () | 2382836..2382912 | + | 77 | NuclAT_11 | - | - |
| - () | 2382836..2382912 | + | 77 | NuclAT_11 | - | - |
| - () | 2382836..2382912 | + | 77 | NuclAT_11 | - | - |
| CXX05_RS11945 () | 2382933..2383313 | - | 381 | WP_000986029.1 | holo-ACP synthase | - |
| CXX05_RS11950 () | 2383313..2384044 | - | 732 | WP_001297412.1 | Pyridoxine 5'-phosphate synthase | VF |
| CXX05_RS11955 () | 2384056..2384784 | - | 729 | WP_000399393.1 | DNA repair protein RecO | - |
| CXX05_RS11960 () | 2384796..2385701 | - | 906 | WP_000020737.1 | GTPase Era | - |
| CXX05_RS11965 () | 2385698..2386378 | - | 681 | WP_001068343.1 | ribonuclease III | - |
| CXX05_RS11970 () | 2386650..2387624 | - | 975 | WP_000002542.1 | signal peptidase I | - |
| CXX05_RS11975 () | 2387640..2389439 | - | 1800 | WP_000790168.1 | translation elongation factor 4 | - |
| CXX05_RS11980 () | 2389637..2390116 | - | 480 | WP_000589070.1 | Protein RseC | VF |
| CXX05_RS11985 () | 2390113..2391069 | - | 957 | WP_000812053.1 | Sigma-E factor regulatory protein RseB | VF |
| CXX05_RS11990 () | 2391069..2391719 | - | 651 | WP_001168459.1 | Anti-sigma-E factor RseA | VF |
| CXX05_RS11995 () | 2391752..2392327 | - | 576 | WP_001295364.1 | ECF RNA polymerase sigma-E factor | VF |
| CXX05_RS12000 () | 2392324..2392479 | - | 156 | WP_001303621.1 | rpoE leader peptide RseD | - |
| CXX05_RS12005 () | 2392735..2394357 | + | 1623 | WP_001094498.1 | L-aspartate oxidase | - |
| CXX05_RS12010 () | 2394342..2395079 | - | 738 | WP_001297411.1 | tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN | - |
| CXX05_RS12015 () | 2395211..2396545 | + | 1335 | WP_000219196.1 | ATP-dependent RNA helicase SrmB | - |
| CXX05_RS12020 () | 2396578..2397459 | - | 882 | WP_001297408.1 | LysR family transcriptional regulator | - |
| CXX05_RS12025 () | 2397486..2398183 | - | 698 | Protein_2300 | IS1 family transposase | - |
| CXX05_RS12030 () | 2398339..2398926 | + | 588 | WP_000189206.1 | cysteine/O-acetylserine transporter | - |
| CXX05_RS12035 () | 2398981..2399364 | - | 384 | WP_000627807.1 | autonomous glycyl radical cofactor GrcA | - |
| CXX05_RS12040 () | 2399669..2400358 | + | 690 | WP_001262723.1 | uracil-DNA glycosylase | - |
| CXX05_RS12045 () | 2400406..2401443 | - | 1038 | WP_000997411.1 | tRNA/rRNA methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|