MGE detailed information
MGE type: Genomic_island MGE length: 18448 bp
Accession: NZ_CP025716 Location: 276982..295429 Organism: Escherichia coli strain BH100L substr. MG2017 Replicon: chromosome
Accession: NZ_CP025716 Location: 276982..295429 Organism: Escherichia coli strain BH100L substr. MG2017 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BH100L_RS01295 () | 273097..273522 | - | 426 | WP_001189667.1 | type VI secretion system baseplate subunit TssE | - |
| BH100L_RS01300 () | 273527..275011 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| BH100L_RS01305 () | 275034..275537 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| BH100L_RS01310 () | 276243..276761 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| BH100L_RS01315 () | 276982..278964 | + | 1983 | WP_021573161.1 | hypothetical protein | VF |
| BH100L_RS01320 () | 279071..280117 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| BH100L_RS01325 () | 280110..281549 | + | 1440 | WP_000528851.1 | DUF4150 domain-containing protein | - |
| BH100L_RS01330 () | 281524..281814 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| BH100L_RS01335 () | 282072..282836 | + | 765 | Protein_249 | ISAs1 family transposase | - |
| BH100L_RS01340 () | 283065..283568 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| BH100L_RS01345 () | 283662..284150 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| BH100L_RS01350 () | 284176..284370 | + | 195 | Protein_252 | ISAs1 family transposase | - |
| BH100L_RS01355 () | 284421..285191 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| BH100L_RS01360 () | 285372..285818 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| BH100L_RS01365 () | 285861..288305 | - | 2445 | WP_000973131.1 | hypothetical protein | VF |
| BH100L_RS01370 () | 288545..289123 | + | 579 | WP_000284050.1 | hypothetical protein | VF |
| BH100L_RS01380 () | 290626..292338 | - | 1713 | Protein_258 | hypothetical protein | VF |
| BH100L_RS01385 () | 292310..293095 | + | 786 | WP_000207578.1 | hypothetical protein | VF |
| BH100L_RS01390 () | 293166..294221 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| BH100L_RS01395 () | 294273..294566 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| BH100L_RS01400 () | 294569..294967 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| BH100L_RS01405 () | 294977..295429 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| BH100L_RS01410 () | 295619..296758 | + | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| BH100L_RS01415 () | 296755..297369 | + | 615 | WP_000602124.1 | peptide chain release factor H | - |
| BH100L_RS01420 () | 297426..298883 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| BH100L_RS01425 () | 299144..299602 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| - () | 300198..300278 | + | 81 | NuclAT_4 | - | - |
| - () | 300198..300278 | + | 81 | NuclAT_4 | - | - |
| - () | 300198..300278 | + | 81 | NuclAT_4 | - | - |
| - () | 300198..300278 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|