MGE detailed information
MGE type: Genomic_island MGE length: 10672 bp
Accession: NZ_CP025707 Location: 1866789..1877460 Organism: Escherichia coli strain YDC107 Replicon: chromosome
Accession: NZ_CP025707 Location: 1866789..1877460 Organism: Escherichia coli strain YDC107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YDC107_RS09210 () | 1862335..1863543 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| YDC107_RS09215 () | 1863569..1864900 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| YDC107_RS09220 () | 1864922..1865911 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| YDC107_RS09225 () | 1866010..1866947 | - | 938 | Protein_1805 | transcriptional regulator TdcA | - |
| YDC107_RS09230 () | 1867136..1867480 | + | 345 | WP_001521376.1 | transcriptional activator TdcR | - |
| YDC107_RS09235 () | 1867736..1868275 | + | 540 | WP_000675749.1 | hypothetical protein | - |
| YDC107_RS09240 () | 1868297..1869484 | + | 1188 | WP_001521377.1 | YhaC family protein | - |
| YDC107_RS09250 () | 1870284..1871429 | - | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| YDC107_RS09255 () | 1871526..1872416 | - | 891 | WP_021523278.1 | 2-hydroxy-3-oxopropionate reductase | - |
| YDC107_RS09260 () | 1872446..1873216 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| YDC107_RS09265 () | 1873232..1874566 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| YDC107_RS09270 () | 1874941..1876512 | + | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| YDC107_RS09275 () | 1876661..1876996 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| YDC107_RS09280 () | 1876996..1877460 | + | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| YDC107_RS09285 () | 1877515..1878324 | - | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| YDC107_RS09290 () | 1878573..1879853 | + | 1281 | WP_001521382.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| YDC107_RS09295 () | 1879876..1880349 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| YDC107_RS09300 () | 1880360..1881139 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| YDC107_RS09305 () | 1881129..1882007 | + | 879 | WP_001298314.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| YDC107_RS09310 () | 1882025..1882459 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|