MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 98748 bp
Accession: NZ_CP025288 Location: 542845..641592 Organism: Ethanoligenens harbinense strain X-29 Replicon: chromosome
Accession: NZ_CP025288 Location: 542845..641592 Organism: Ethanoligenens harbinense strain X-29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CN246_RS02635 () | 537972..538310 | - | 339 | WP_013484056.1 | hypothetical protein | - |
| CN246_RS02640 () | 538481..538804 | - | 324 | WP_013484055.1 | Mor transcription activator domain-containing protein | - |
| CN246_RS02645 () | 538801..539301 | - | 501 | WP_013484054.1 | regulatory protein GemA | - |
| CN246_RS02650 () | 539332..539997 | - | 666 | WP_013484053.1 | hypothetical protein | - |
| CN246_RS02655 () | 539984..540256 | - | 273 | WP_013484052.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| CN246_RS02660 () | 540258..540698 | - | 441 | WP_013484051.1 | hypothetical protein | - |
| CN246_RS02665 () | 540800..541108 | - | 309 | WP_013484469.1 | hypothetical protein | - |
| CN246_RS02670 () | 541101..541574 | - | 474 | WP_013484470.1 | hypothetical protein | - |
| CN246_RS02675 () | 541581..541868 | - | 288 | WP_013484471.1 | DUF3789 domain-containing protein | - |
| CN246_RS02680 () | 541879..542829 | - | 951 | WP_013484472.1 | AAA family ATPase | - |
| CN246_RS02685 () | 542845..544797 | - | 1953 | WP_106919180.1 | hypothetical protein ; Integrase | Integrase |
| CN246_RS02695 () | 544892..545725 | - | 834 | WP_013484474.1 | ATP-binding protein | - |
| CN246_RS02700 () | 545727..546068 | - | 342 | WP_013484475.1 | conserved phage C-terminal domain-containing protein | - |
| CN246_RS02705 () | 546085..546264 | - | 180 | WP_013484043.1 | hypothetical protein | - |
| CN246_RS02710 () | 546422..546832 | + | 411 | WP_013484476.1 | helix-turn-helix domain-containing protein | - |
| CN246_RS02715 () | 546819..547235 | + | 417 | WP_041686602.1 | ImmA/IrrE family metallo-endopeptidase | - |
| CN246_RS02720 () | 547529..547948 | + | 420 | WP_083803590.1 | restriction endonuclease | - |
| CN246_RS02725 () | 548507..549304 | - | 798 | WP_013484478.1 | IS21 family transposase ISMac9 | Transposase |
| CN246_RS15345 () | 549301..550522 | - | 1222 | Protein_520 | IS21 family transposase ISMac9 | Transposase |
| CN246_RS02740 () | 550987..551538 | + | 552 | WP_013484479.1 | sigma-70 family RNA polymerase sigma factor | - |
| CN246_RS02745 () | 551525..552319 | + | 795 | WP_013484480.1 | hypothetical protein | - |
| CN246_RS02750 () | 552310..553200 | + | 891 | WP_013484481.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| CN246_RS02755 () | 553181..554332 | + | 1152 | WP_013484482.1 | ABC transporter permease | - |
| CN246_RS15350 () | 554445..554810 | - | 366 | WP_175405609.1 | hypothetical protein | - |
| CN246_RS02770 () | 555168..555599 | + | 432 | WP_013484484.1 | sigma-70 family RNA polymerase sigma factor | - |
| CN246_RS02775 () | 555654..555848 | + | 195 | WP_083803591.1 | DUF3847 domain-containing protein | - |
| CN246_RS02780 () | 556043..557479 | + | 1437 | Protein_528 | MobA/MobL family protein | - |
| CN246_RS02785 () | 557527..557754 | - | 228 | WP_083803592.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| CN246_RS02790 () | 557805..558080 | - | 276 | WP_013484486.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| CN246_RS02795 () | 558545..558745 | + | 201 | WP_013484488.1 | transposon-encoded TnpW family protein | - |
| CN246_RS02800 () | 559008..559118 | + | 111 | Protein_532 | transposase | - |
| CN246_RS02805 () | 559352..560683 | + | 1332 | WP_013484489.1 | ferredoxin reductase family protein | - |
| CN246_RS02810 () | 560718..561101 | + | 384 | WP_013484490.1 | cytochrome b5 | - |
| CN246_RS02815 () | 561184..561435 | + | 252 | WP_041687065.1 | SHOCT domain-containing protein | - |
| CN246_RS02820 () | 561492..562178 | + | 687 | WP_041686605.1 | Transcriptional regulatory protein WalR | VF |
| CN246_RS02825 () | 562175..563614 | + | 1440 | WP_013484493.1 | HAMP domain-containing histidine kinase | - |
| CN246_RS02830 () | 563887..564663 | - | 777 | WP_013484494.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| CN246_RS02835 () | 564660..565378 | - | 719 | Protein_539 | SDR family oxidoreductase | - |
| CN246_RS02840 () | 565625..566497 | + | 873 | WP_013484496.1 | LysR family transcriptional regulator | - |
| CN246_RS02845 () | 567058..572595 | - | 5538 | WP_013484497.1 | phosphodiester glycosidase family protein | - |
| CN246_RS02850 () | 573249..573758 | - | 510 | WP_137143828.1 | hypothetical protein | - |
| CN246_RS14960 () | 574066..574272 | - | 207 | WP_137143829.1 | hypothetical protein | - |
| CN246_RS02865 () | 574542..574937 | + | 396 | WP_041686606.1 | hypothetical protein | - |
| CN246_RS02870 () | 575140..578409 | - | 3270 | WP_013484500.1 | leucine-rich repeat protein | - |
| CN246_RS02875 () | 579240..585101 | + | 5862 | WP_013484501.1 | Beta-L-arabinobiosidase | VF |
| CN246_RS02880 () | 585313..585483 | + | 171 | WP_083803766.1 | DUF1540 domain-containing protein | - |
| CN246_RS02885 () | 585572..585784 | + | 213 | WP_041686607.1 | hypothetical protein | - |
| CN246_RS02890 () | 585931..586824 | + | 894 | WP_041686608.1 | hypothetical protein | - |
| CN246_RS02895 () | 586821..587732 | + | 912 | WP_013484505.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| CN246_RS02900 () | 587741..588583 | + | 843 | WP_106919263.1 | ABC transporter permease subunit | - |
| CN246_RS02905 () | 590208..590981 | + | 774 | WP_013484507.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| CN246_RS02910 () | 591155..592282 | + | 1128 | WP_041687071.1 | ABC transporter substrate-binding protein | - |
| CN246_RS02915 () | 592358..593170 | + | 813 | WP_013484509.1 | alkaline phosphatase family protein | - |
| CN246_RS02920 () | 593176..594030 | + | 855 | WP_013484510.1 | ABC transporter permease subunit | - |
| CN246_RS02925 () | 594020..594799 | + | 780 | WP_013484511.1 | ABC transporter permease subunit | - |
| CN246_RS02930 () | 594828..595838 | + | 1011 | WP_013484512.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| CN246_RS02935 () | 595868..596593 | + | 726 | WP_013484513.1 | HAD family hydrolase | - |
| CN246_RS02945 () | 597356..598330 | - | 975 | WP_013484515.1 | class I mannose-6-phosphate isomerase | - |
| CN246_RS02950 () | 598380..598637 | - | 258 | WP_013484516.1 | HPr family phosphocarrier protein | - |
| CN246_RS02955 () | 598640..600055 | - | 1416 | WP_013484517.1 | PTS fructose transporter subunit IIBC | - |
| CN246_RS02960 () | 600154..600594 | - | 441 | WP_120405674.1 | PTS sugar transporter subunit IIA | - |
| CN246_RS02965 () | 600657..602582 | - | 1926 | WP_159033344.1 | PTS sugar transporter subunit IIA | - |
| CN246_RS14965 () | 603011..603376 | + | 366 | WP_137143831.1 | hypothetical protein | - |
| CN246_RS02970 () | 603761..604123 | + | 363 | WP_013484520.1 | NifB/NifX family molybdenum-iron cluster-binding protein | - |
| CN246_RS02975 () | 604249..605088 | + | 840 | WP_013484521.1 | ATP-binding protein | - |
| CN246_RS02980 () | 605085..605960 | + | 876 | WP_013484522.1 | ATP-binding protein | - |
| CN246_RS02985 () | 605971..606390 | + | 420 | WP_013484523.1 | acyl-CoA thioesterase | - |
| CN246_RS02990 () | 606397..606765 | + | 369 | WP_013484524.1 | dinitrogenase iron-molybdenum cofactor biosynthesis protein | - |
| CN246_RS02995 () | 606861..607706 | + | 846 | WP_013484525.1 | MBL fold metallo-hydrolase | - |
| CN246_RS03000 () | 607884..609368 | - | 1485 | WP_013484527.1 | aldehyde dehydrogenase family protein | - |
| CN246_RS03005 () | 609947..611305 | - | 1359 | WP_041687075.1 | aspartate aminotransferase family protein | - |
| CN246_RS03010 () | 611382..612512 | - | 1131 | WP_013484529.1 | iron-containing alcohol dehydrogenase | - |
| CN246_RS03015 () | 612768..613319 | - | 552 | WP_013484530.1 | XRE family transcriptional regulator | - |
| CN246_RS03020 () | 613825..614559 | + | 735 | WP_013484531.1 | HTH-type transcriptional regulator MalT | VF |
| CN246_RS03025 () | 614777..615127 | + | 351 | WP_013484532.1 | P-II family nitrogen regulator | - |
| CN246_RS03030 () | 615166..616260 | + | 1095 | WP_041687076.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| CN246_RS03035 () | 616273..617139 | + | 867 | WP_013484534.1 | ABC transporter permease | - |
| CN246_RS03040 () | 617144..619078 | + | 1935 | WP_013484535.1 | Spermidine/putrescine-binding periplasmic protein | VF |
| CN246_RS03045 () | 619410..620762 | + | 1353 | WP_013484536.1 | Putrescine aminotransferase | VF |
| CN246_RS03050 () | 621479..622162 | + | 684 | WP_041686611.1 | Transcriptional regulatory protein WalR | VF |
| CN246_RS03055 () | 622159..623478 | + | 1320 | WP_013484539.1 | HAMP domain-containing histidine kinase | - |
| CN246_RS03060 () | 623576..624283 | + | 708 | WP_013484540.1 | ABC transporter ATP-binding protein | - |
| CN246_RS03065 () | 624289..627531 | + | 3243 | WP_156793967.1 | FtsX-like permease family protein | - |
| CN246_RS15355 () | 627935..628060 | + | 126 | Protein_585 | SDR family NAD(P)-dependent oxidoreductase | - |
| CN246_RS03080 () | 628161..628502 | + | 342 | WP_083803767.1 | hypothetical protein | - |
| CN246_RS03085 () | 628516..629560 | + | 1045 | Protein_587 | PTS glucitol/sorbitol transporter subunit IIB | - |
| CN246_RS03090 () | 629720..630082 | + | 363 | WP_041687081.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| CN246_RS03095 () | 630120..630421 | + | 302 | Protein_589 | HPr family phosphocarrier protein | - |
| CN246_RS03100 () | 630502..630894 | + | 393 | WP_013484544.1 | GntR family transcriptional regulator | - |
| CN246_RS03105 () | 630884..631621 | + | 738 | WP_049776532.1 | ABC transporter ATP-binding protein | - |
| CN246_RS03110 () | 631612..632403 | + | 792 | WP_013484546.1 | hypothetical protein | - |
| CN246_RS03115 () | 632480..633007 | + | 528 | WP_013484547.1 | hypothetical protein | - |
| CN246_RS03120 () | 633035..633961 | + | 927 | WP_013484548.1 | Fluoroquinolones export ATP-binding protein | VF |
| CN246_RS03125 () | 633954..635000 | + | 1047 | WP_013484549.1 | ABC transporter permease subunit | - |
| CN246_RS03130 () | 635463..636665 | + | 1203 | WP_013484550.1 | PLP-dependent aminotransferase family protein | - |
| CN246_RS03135 () | 636751..637122 | + | 372 | WP_013484551.1 | hypothetical protein | - |
| CN246_RS03140 () | 637221..637508 | + | 288 | WP_041686617.1 | hypothetical protein | - |
| CN246_RS03145 () | 637524..638369 | + | 846 | WP_013484552.1 | sulfite exporter TauE/SafE family protein | - |
| CN246_RS03150 () | 638369..638728 | + | 360 | WP_013484553.1 | DUF1634 domain-containing protein | - |
| CN246_RS03155 () | 638754..639638 | - | 885 | WP_013484554.1 | LysR family transcriptional regulator | - |
| CN246_RS03160 () | 639748..640740 | + | 993 | WP_013484555.1 | YeiH family protein | - |
| CN246_RS03165 () | 640899..641249 | - | 351 | WP_013484556.1 | rhodanese-like domain-containing protein | - |
| CN246_RS03170 () | 641269..641592 | - | 324 | WP_013484557.1 | Thioredoxin | VF |
| CN246_RS03175 () | 641841..642218 | - | 378 | WP_013484558.1 | C-GCAxxG-C-C family protein | - |
| CN246_RS03180 () | 642449..643021 | - | 573 | WP_013484559.1 | hypothetical protein | - |
| CN246_RS03185 () | 643133..643267 | - | 135 | Protein_607 | recombinase | - |
| CN246_RS03190 () | 643264..643560 | - | 297 | WP_013484561.1 | hypothetical protein | - |
| CN246_RS03195 () | 644144..644503 | + | 360 | WP_013484562.1 | IS66 family insertion sequence hypothetical protein | - |
| CN246_RS03200 () | 644503..644853 | + | 351 | WP_013484563.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CN246_RS03205 () | 644919..646451 | + | 1533 | WP_013484564.1 | IS66 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|