MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103109 bp
Accession: NZ_CP025251 Location: 4622847..4725955 Organism: Escherichia coli strain BH100 substr. MG2017 Replicon: chromosome
Accession: NZ_CP025251 Location: 4622847..4725955 Organism: Escherichia coli strain BH100 substr. MG2017 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BH100B_RS23370 () | 4617951..4618746 | - | 796 | Protein_4268 | LysR family transcriptional regulator | - |
| BH100B_RS23375 () | 4618850..4619260 | + | 411 | WP_001143718.1 | CidA/LrgA family protein | - |
| BH100B_RS23380 () | 4619253..4619942 | + | 690 | WP_001273403.1 | LrgB family protein | - |
| BH100B_RS23385 () | 4619981..4621630 | - | 1650 | WP_000832548.1 | cation/acetate symporter ActP | - |
| BH100B_RS23390 () | 4621627..4621941 | - | 315 | WP_001298276.1 | DUF485 domain-containing protein | - |
| BH100B_RS23395 () | 4622101..4623449 | + | 1349 | WP_099156434.1 | IS3-like element IS1397 family transposase | - |
| BH100B_RS23400 () | 4623680..4625638 | - | 1959 | WP_000078223.1 | acetate--CoA ligase | - |
| BH100B_RS23415 () | 4626030..4627466 | + | 1437 | WP_099989823.1 | ammonia-forming nitrite reductase cytochrome c552 subunit | - |
| BH100B_RS23420 () | 4627511..4628077 | + | 567 | WP_001295391.1 | cytochrome c nitrite reductase pentaheme subunit | - |
| BH100B_RS23425 () | 4628074..4628745 | + | 672 | WP_000220273.1 | cytochrome c nitrite reductase Fe-S protein | - |
| BH100B_RS23430 () | 4628742..4629698 | + | 957 | WP_000195192.1 | cytochrome c nitrite reductase subunit NrfD | - |
| BH100B_RS23435 () | 4629718..4631436 | + | 1719 | WP_071527075.1 | Cytochrome c-type biogenesis protein CcmF | VF |
| BH100B_RS23440 () | 4631429..4631812 | + | 384 | WP_001032537.1 | heme lyase NrfEFG subunit NrfF | - |
| BH100B_RS23445 () | 4631809..4632405 | + | 597 | WP_000812968.1 | heme lyase NrfEFG subunit NrfG | - |
| BH100B_RS23455 () | 4632748..4634061 | + | 1314 | WP_000789589.1 | glutamate/aspartate:proton symporter GltP | - |
| BH100B_RS27265 () | 4634403..4634621 | - | 219 | WP_158638470.1 | hypothetical protein | - |
| BH100B_RS23460 () | 4634661..4635350 | - | 690 | WP_001296650.1 | sel1 repeat family protein | - |
| BH100B_RS23465 () | 4635461..4636165 | - | 705 | WP_000156927.1 | Oligopeptide transport ATP-binding protein OppF | VF |
| BH100B_RS23470 () | 4636152..4636988 | - | 837 | WP_000132446.1 | Dipeptide transport ATP-binding protein DppD | VF |
| BH100B_RS23475 () | 4636981..4637814 | - | 834 | WP_001131976.1 | ABC transporter permease | - |
| BH100B_RS23480 () | 4637814..4638863 | - | 1050 | WP_001296651.1 | ABC transporter permease | - |
| BH100B_RS23485 () | 4638963..4640531 | - | 1569 | WP_000592285.1 | ABC transporter substrate-binding protein | - |
| BH100B_RS23490 () | 4640906..4643053 | - | 2148 | WP_077249496.1 | formate dehydrogenase subunit alpha | - |
| BH100B_RS23495 () | 4643251..4644717 | - | 1467 | WP_000610559.1 | multidrug efflux transporter outer membrane subunit MdtP | - |
| BH100B_RS23500 () | 4644714..4646765 | - | 2052 | WP_001275228.1 | multidrug efflux transporter permease subunit MdtO | - |
| BH100B_RS23505 () | 4646765..4647796 | - | 1032 | WP_000446372.1 | Multidrug resistance protein MdtN | VF |
| BH100B_RS23510 () | 4647815..4648090 | - | 276 | WP_001298286.1 | hypothetical protein | - |
| BH100B_RS23515 () | 4648299..4650284 | - | 1986 | WP_001298282.1 | alkyl sulfatase YjcS | - |
| BH100B_RS23520 () | 4650557..4651486 | - | 930 | WP_001171673.1 | allose kinase | - |
| BH100B_RS23525 () | 4651470..4652165 | - | 696 | WP_001298295.1 | D-allulose-6-phosphate 3-epimerase | VF |
| BH100B_RS23530 () | 4652176..4653156 | - | 981 | WP_000507104.1 | D-allose ABC transporter permease | - |
| BH100B_RS23535 () | 4653135..4654667 | - | 1533 | WP_000235243.1 | Ribose import ATP-binding protein RbsA | VF |
| BH100B_RS23540 () | 4654795..4655730 | - | 936 | WP_001361478.1 | D-allose transporter substrate-binding protein | - |
| BH100B_RS23545 () | 4655789..4656679 | - | 891 | WP_000083216.1 | als operon DNA-binding transcriptional repressor AlsR | - |
| BH100B_RS23555 () | 4657038..4657487 | + | 450 | WP_000716790.1 | bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB | - |
| BH100B_RS23560 () | 4657556..4657885 | + | 330 | WP_000819746.1 | protein YjdP | - |
| BH100B_RS23565 () | 4657913..4658671 | - | 759 | WP_024179047.1 | phosphonate metabolism protein PhnP | - |
| BH100B_RS23570 () | 4658673..4659107 | - | 435 | WP_001110516.1 | aminoalkylphosphonate N-acetyltransferase | - |
| BH100B_RS23575 () | 4659094..4659651 | - | 558 | WP_000145981.1 | ribose 1,5-bisphosphokinase | - |
| BH100B_RS23580 () | 4659651..4660787 | - | 1137 | WP_000586314.1 | Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase | VF |
| BH100B_RS23585 () | 4660784..4661464 | - | 681 | WP_000611436.1 | phosphonate C-P lyase system protein PhnL | - |
| BH100B_RS23595 () | 4663010..4663768 | - | 759 | WP_001075536.1 | Putative phosphonates utilization ATP-binding protein PhnK | VF |
| BH100B_RS23600 () | 4663765..4664610 | - | 846 | WP_000002294.1 | alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ | - |
| BH100B_RS23605 () | 4664603..4665667 | - | 1065 | WP_000289069.1 | alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI | - |
| BH100B_RS23610 () | 4665667..4666251 | - | 585 | WP_000171616.1 | phosphonate C-P lyase system protein PhnH | - |
| BH100B_RS23615 () | 4666248..4666700 | - | 453 | WP_000542788.1 | phosphonate C-P lyase system protein PhnG | - |
| BH100B_RS23620 () | 4666701..4667426 | - | 726 | WP_000550741.1 | phosphonate metabolism transcriptional regulator PhnF | - |
| BH100B_RS23625 () | 4667447..4668226 | - | 780 | WP_001193496.1 | phosphonate ABC transporter, permease protein PhnE | - |
| BH100B_RS23630 () | 4668332..4669348 | - | 1017 | WP_000992004.1 | phosphonate ABC transporter substrate-binding protein | - |
| BH100B_RS23635 () | 4669373..4670161 | - | 789 | WP_001193398.1 | Phosphate-import ATP-binding protein PhnC | VF |
| BH100B_RS23640 () | 4670294..4670737 | - | 444 | WP_001131317.1 | VOC family metalloprotein YjdN | - |
| BH100B_RS23645 () | 4670897..4671232 | - | 336 | WP_001300891.1 | phnA family protein | - |
| BH100B_RS23655 () | 4671635..4673863 | + | 2229 | WP_000288609.1 | clamp-binding protein CrfC | - |
| BH100B_RS23660 () | 4673860..4674738 | + | 879 | WP_000169136.1 | YjcZ-like family protein | - |
| BH100B_RS23665 () | 4675002..4676504 | + | 1503 | WP_001298520.1 | glycine betaine/L-proline transporter ProP | - |
| BH100B_RS23670 () | 4676616..4676705 | + | 90 | WP_000797658.1 | LpxT activity modulator PmrR | - |
| BH100B_RS23675 () | 4676681..4677781 | - | 1101 | WP_001052139.1 | two-component system sensor histidine kinase PmrB | - |
| BH100B_RS23680 () | 4677782..4678450 | - | 669 | WP_000697915.1 | Transcriptional regulatory protein BasR | VF |
| BH100B_RS23685 () | 4678447..4680090 | - | 1644 | WP_001298524.1 | Phosphoethanolamine transferase EptA | VF |
| BH100B_RS23690 () | 4680194..4681531 | - | 1338 | WP_000093154.1 | arginine/agmatine antiporter | - |
| BH100B_RS23695 () | 4681668..4682429 | - | 762 | WP_001217059.1 | HTH-type transcriptional regulator GadX | VF |
| BH100B_RS23700 () | 4682765..4685032 | - | 2268 | WP_001447136.1 | arginine decarboxylase | - |
| BH100B_RS23705 () | 4685231..4686139 | - | 909 | WP_001090771.1 | transcriptional regulator MelR | - |
| BH100B_RS23715 () | 4686422..4687777 | + | 1356 | WP_000986620.1 | alpha-galactosidase | - |
| BH100B_RS23720 () | 4687774..4688424 | - | 651 | WP_000198735.1 | DUF2238 domain-containing protein | - |
| BH100B_RS23725 () | 4688547..4690193 | - | 1647 | WP_000066699.1 | class I fumarate hydratase | - |
| BH100B_RS23730 () | 4690271..4691611 | - | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
| BH100B_RS23740 () | 4692182..4692901 | - | 720 | WP_000611288.1 | Transcriptional regulatory protein DcuR | VF |
| BH100B_RS23745 () | 4692898..4694529 | - | 1632 | WP_001216466.1 | sensor histidine kinase | - |
| BH100B_RS23750 () | 4694710..4694940 | + | 231 | WP_000373291.1 | (4Fe-4S)-binding protein | - |
| BH100B_RS23755 () | 4694952..4695224 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| BH100B_RS23760 () | 4695453..4695749 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| BH100B_RS23765 () | 4695777..4695950 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| BH100B_RS23770 () | 4696069..4697586 | - | 1518 | WP_000003805.1 | lysine--tRNA ligase | - |
| BH100B_RS23775 () | 4697823..4699280 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| BH100B_RS23780 () | 4699339..4701486 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| BH100B_RS23785 () | 4701566..4702900 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| BH100B_RS23795 () | 4703266..4704804 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| BH100B_RS23805 () | 4705724..4706584 | + | 861 | WP_000158645.1 | hypothetical protein | - |
| BH100B_RS23810 () | 4706800..4707048 | + | 249 | WP_000616796.1 | AlpA family transcriptional regulator | - |
| BH100B_RS23815 () | 4707045..4707356 | + | 312 | WP_000837631.1 | hypothetical protein | - |
| BH100B_RS23820 () | 4707371..4707757 | + | 387 | WP_001545719.1 | hypothetical protein | - |
| BH100B_RS23825 () | 4707774..4708061 | + | 288 | WP_001291073.1 | hypothetical protein | - |
| BH100B_RS23830 () | 4708156..4708446 | + | 291 | WP_000041813.1 | hypothetical protein | - |
| BH100B_RS23835 () | 4708496..4708876 | + | 381 | WP_000711006.1 | hypothetical protein | - |
| BH100B_RS23845 () | 4709792..4710196 | - | 405 | WP_001287394.1 | H-NS histone family protein | - |
| BH100B_RS23850 () | 4710350..4710817 | - | 468 | WP_001233363.1 | DUF4756 family protein | - |
| BH100B_RS23855 () | 4710919..4711620 | - | 702 | WP_000020958.1 | hypothetical protein | - |
| BH100B_RS27270 () | 4712502..4712693 | + | 192 | WP_001059601.1 | hypothetical protein | - |
| BH100B_RS23865 () | 4713340..4713906 | + | 567 | WP_001386505.1 | hypothetical protein | - |
| BH100B_RS23870 () | 4713922..4714473 | + | 552 | WP_001224785.1 | lipoprotein | - |
| BH100B_RS23875 () | 4714484..4714759 | + | 276 | WP_000430100.1 | membrane protein | - |
| BH100B_RS23880 () | 4714804..4715223 | - | 420 | WP_000208713.1 | TIR domain-containing protein | - |
| BH100B_RS23885 () | 4715225..4716490 | - | 1266 | WP_000749528.1 | tetratricopeptide repeat protein | - |
| BH100B_RS23890 () | 4716852..4717292 | + | 441 | WP_000866053.1 | hypothetical protein | - |
| BH100B_RS23895 () | 4717267..4717482 | - | 216 | WP_000132147.1 | hypothetical protein | - |
| BH100B_RS23900 () | 4717576..4719111 | - | 1536 | WP_000964086.1 | MobA/MobL family protein | - |
| BH100B_RS23905 () | 4719866..4720255 | + | 390 | WP_000149058.1 | hypothetical protein | - |
| BH100B_RS23910 () | 4720248..4720577 | + | 330 | WP_000043166.1 | conjugal transfer protein TraD | - |
| BH100B_RS27275 () | 4720755..4720937 | + | 183 | WP_023151880.1 | hypothetical protein | - |
| BH100B_RS23915 () | 4720934..4722562 | + | 1629 | WP_000668949.1 | type I restriction-modification system subunit M | - |
| BH100B_RS23920 () | 4722615..4722962 | - | 348 | WP_000465345.1 | hypothetical protein | - |
| BH100B_RS23925 () | 4723227..4723607 | - | 381 | Protein_4371 | PLD-like domain protein | - |
| BH100B_RS23930 () | 4723819..4724163 | - | 345 | WP_001390901.1 | hypothetical protein | - |
| BH100B_RS23935 () | 4724711..4725955 | - | 1245 | WP_001219072.1 | Prophage integrase IntA ; Integrase | Integrase |
| BH100B_RS23945 () | 4726317..4726892 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| BH100B_RS23950 () | 4726929..4728626 | - | 1698 | WP_000068942.1 | protein-disulfide reductase DsbD | - |
| BH100B_RS23955 () | 4728602..4728940 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| BH100B_RS23960 () | 4729056..4730358 | - | 1303 | Protein_4377 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|