MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 146581 bp
Accession: NZ_CP025240 Location: 1..146581 Organism: Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1928 Replicon: plasmid pSNE3-1928
Accession: NZ_CP025240 Location: 1..146581 Organism: Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1928 Replicon: plasmid pSNE3-1928
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AW84_RS24930 () | 323..862 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| AW84_RS24935 () | 867..1154 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| AW84_RS24940 () | 1139..2239 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| AW84_RS24955 () | 3276..3710 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| AW84_RS24960 () | 3728..4843 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| AW84_RS24965 () | 5112..5720 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| AW84_RS24970 () | 5725..6246 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| AW84_RS24975 () | 6249..6770 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| AW84_RS24980 () | 6867..7340 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| AW84_RS24985 () | 7351..7644 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| AW84_RS24990 () | 7649..8503 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| AW84_RS24995 () | 8503..9462 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| AW84_RS25000 () | 9478..10338 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| AW84_RS25005 () | 10372..10800 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| AW84_RS25010 () | 10857..11216 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| AW84_RS25015 () | 11216..11662 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| AW84_RS25020 () | 11659..12177 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| AW84_RS25025 () | 12177..12407 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| AW84_RS25030 () | 12394..13251 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| AW84_RS25040 () | 13482..14009 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| AW84_RS25045 () | 14067..14339 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| AW84_RS25050 () | 14427..14720 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| AW84_RS25055 () | 14747..15049 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| AW84_RS25060 () | 15054..15404 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AW84_RS25065 () | 15567..16115 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| AW84_RS25075 () | 16456..16650 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| AW84_RS25080 () | 16661..17032 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| AW84_RS25085 () | 17025..17495 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| AW84_RS25090 () | 17510..17845 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| AW84_RS25095 () | 17942..18430 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| AW84_RS25100 () | 18433..18930 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| AW84_RS25110 () | 19145..19849 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AW84_RS25115 () | 19914..20093 | - | 180 | Protein_32 | helix-turn-helix transcriptional regulator | - |
| AW84_RS25120 () | 20400..21104 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AW84_RS25970 () | 21110..21250 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| AW84_RS25130 () | 21736..22473 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| AW84_RS25135 () | 22470..22694 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| AW84_RS25140 () | 22905..24398 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| AW84_RS26070 () | 24867..25313 | + | 447 | Protein_38 | DUF3363 domain-containing protein | - |
| AW84_RS25150 () | 25530..26744 | + | 1215 | WP_012728216.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| AW84_RS25155 () | 26772..27077 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| AW84_RS25160 () | 27189..27377 | + | 189 | Protein_41 | IS91 family transposase | - |
| AW84_RS25165 () | 27344..28543 | - | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| AW84_RS25170 () | 28649..29299 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| AW84_RS25175 () | 29331..29573 | - | 243 | WP_000844627.1 | transposase | - |
| AW84_RS25185 () | 29879..30715 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| AW84_RS25190 () | 30715..31518 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| AW84_RS25195 () | 31579..32394 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| AW84_RS25205 () | 32701..33012 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| AW84_RS25210 () | 33186..33971 | + | 786 | WP_001151304.1 | ParA family protein | - |
| AW84_RS25215 () | 33975..35156 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| AW84_RS25220 () | 35205..35477 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| AW84_RS25225 () | 35530..36165 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| AW84_RS25980 () | 36257..36400 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| AW84_RS25230 () | 36727..37104 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| AW84_RS26075 () | 37097..37378 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| AW84_RS25240 () | 37353..38027 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| AW84_RS25245 () | 38095..38526 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| AW84_RS25250 () | 38532..38843 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| AW84_RS25255 () | 38852..39352 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| AW84_RS25260 () | 39356..40783 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| AW84_RS25265 () | 40783..41439 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| AW84_RS25270 () | 41495..42112 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| AW84_RS25280 () | 42324..42623 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| AW84_RS25285 () | 42714..43202 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| AW84_RS25290 () | 43217..45409 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| AW84_RS25295 () | 45409..45642 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| AW84_RS25300 () | 45624..46241 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| AW84_RS25305 () | 46409..49381 | + | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| AW84_RS25310 () | 49378..51243 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| AW84_RS25315 () | 51254..51838 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| AW84_RS25320 () | 51795..52424 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| AW84_RS25325 () | 52434..52880 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| AW84_RS25330 () | 52890..53267 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| AW84_RS25335 () | 53267..53929 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| AW84_RS25340 () | 54253..54630 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| AW84_RS25345 () | 54775..55056 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| AW84_RS25350 () | 55053..55631 | + | 579 | WP_076097733.1 | pilus assembly protein | - |
| AW84_RS25355 () | 55663..56580 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| AW84_RS25360 () | 56580..57893 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| AW84_RS25365 () | 57890..58468 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AW84_RS25370 () | 58472..58864 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| AW84_RS25375 () | 59149..60411 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| AW84_RS25380 () | 60735..61880 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| AW84_RS25385 () | 61974..62507 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| AW84_RS25390 () | 62504..62821 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| AW84_RS25400 () | 63549..69035 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| AW84_RS25405 () | 69184..69891 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| AW84_RS25410 () | 69888..72335 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| AW84_RS25415 () | 72350..72667 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| AW84_RS25420 () | 72664..73194 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| AW84_RS25425 () | 73157..74422 | + | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| AW84_RS25430 () | 74419..75090 | + | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| AW84_RS25435 () | 75087..76094 | + | 1008 | WP_000983282.1 | TraU family protein | - |
| AW84_RS25440 () | 76198..79005 | + | 2808 | WP_001447718.1 | conjugal transfer mating pair stabilization protein TraN | - |
| AW84_RS25445 () | 79044..79904 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| AW84_RS25450 () | 80027..80668 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| AW84_RS25455 () | 80963..81283 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| AW84_RS25460 () | 81587..81772 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| AW84_RS25465 () | 81992..82960 | + | 969 | WP_000085160.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| AW84_RS25470 () | 82971..83879 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| AW84_RS25475 () | 83940..84470 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| AW84_RS25480 () | 84565..85554 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| AW84_RS25485 () | 85617..86627 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| AW84_RS25495 () | 86827..88104 | + | 1278 | WP_000170087.1 | DUF3150 domain-containing protein | - |
| AW84_RS25500 () | 88189..89985 | + | 1797 | WP_000039319.1 | VWA domain-containing protein | - |
| AW84_RS25505 () | 90047..90382 | + | 336 | WP_001447572.1 | hypothetical protein | - |
| AW84_RS25510 () | 90647..91186 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| AW84_RS25515 () | 91277..91777 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| AW84_RS25520 () | 91851..92735 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| AW84_RS25525 () | 92801..93025 | + | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| AW84_RS25530 () | 93087..93476 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| AW84_RS25535 () | 93466..93918 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| AW84_RS25545 () | 94256..94447 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| AW84_RS25550 () | 94492..94869 | + | 378 | WP_001337696.1 | hypothetical protein | - |
| AW84_RS25555 () | 95061..95405 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| AW84_RS25560 () | 95483..95785 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| AW84_RS25565 () | 95863..97488 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| AW84_RS25570 () | 97549..97980 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| AW84_RS25575 () | 98054..98608 | + | 555 | WP_001093867.1 | hypothetical protein | - |
| AW84_RS25580 () | 98841..99227 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| AW84_RS25585 () | 99315..101768 | + | 2454 | WP_001187969.1 | phosphoadenosine phosphosulfate reductase | - |
| AW84_RS25590 () | 101970..102173 | + | 204 | WP_000050847.1 | hypothetical protein | - |
| AW84_RS25595 () | 102245..102850 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| AW84_RS25600 () | 102843..103112 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| AW84_RS25605 () | 103126..103344 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| AW84_RS25610 () | 103418..103975 | + | 558 | WP_000064432.1 | hypothetical protein | - |
| AW84_RS25615 () | 104050..104901 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| AW84_RS25620 () | 105360..105746 | + | 387 | WP_001077336.1 | hypothetical protein | - |
| AW84_RS25625 () | 105924..107651 | + | 1728 | WP_000122922.1 | toprim domain-containing protein | - |
| AW84_RS25630 () | 107638..107916 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| AW84_RS25635 () | 107989..108210 | + | 222 | WP_000714163.1 | hypothetical protein | - |
| AW84_RS25640 () | 108392..109396 | - | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| AW84_RS25645 () | 109475..111379 | - | 1905 | Protein_133 | Tn3 family transposase | - |
| AW84_RS25650 () | 111435..112139 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AW84_RS25655 () | 112202..112906 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| AW84_RS25660 () | 113116..114105 | - | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| AW84_RS25665 () | 114102..114338 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| AW84_RS25670 () | 114335..114700 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| AW84_RS25675 () | 114812..115450 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| AW84_RS25680 () | 115465..117150 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| AW84_RS25685 () | 117222..117497 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| AW84_RS25690 () | 117513..117863 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| AW84_RS25695 () | 117935..118369 | + | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| AW84_RS25700 () | 118469..119473 | + | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| AW84_RS25705 () | 119750..119869 | + | 120 | Protein_145 | permease | - |
| AW84_RS26000 () | 119879..119995 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| AW84_RS25710 () | 120116..120490 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| AW84_RS25715 () | 120604..121329 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| AW84_RS25725 () | 121462..125715 | + | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| AW84_RS25730 () | 125687..126127 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| AW84_RS25735 () | 126298..126750 | + | 453 | Protein_151 | hypothetical protein | - |
| AW84_RS25740 () | 126766..127368 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| AW84_RS25745 () | 127638..127919 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| AW84_RS25755 () | 128218..128754 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| AW84_RS25760 () | 128757..129767 | + | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| AW84_RS25765 () | 129772..130641 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| AW84_RS25770 () | 130638..131129 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| AW84_RS25775 () | 131456..132331 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| AW84_RS25780 () | 132493..133533 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| AW84_RS25790 () | 133820..135331 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| AW84_RS25795 () | 135442..136482 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| AW84_RS25800 () | 136484..137917 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| AW84_RS25805 () | 137930..141544 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| AW84_RS25810 () | 141582..141944 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| AW84_RS25815 () | 142660..142932 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| AW84_RS25820 () | 142932..143465 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| AW84_RS25825 () | 143476..144084 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| AW84_RS25830 () | 144081..144631 | + | 551 | Protein_168 | regulator | - |
| AW84_RS25835 () | 144691..145110 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| AW84_RS25840 () | 145112..145405 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| AW84_RS25845 () | 145422..146405 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|