MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 122896 bp
Accession: NZ_CP025236 Location: 1..122896 Organism: Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 Replicon: plasmid pSNE2-1926
Accession: NZ_CP025236 Location: 1..122896 Organism: Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1926 Replicon: plasmid pSNE2-1926
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AW82_RS24310 () | 28..567 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| AW82_RS24315 () | 572..859 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| AW82_RS24320 () | 844..1944 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| AW82_RS24335 () | 2981..3415 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| AW82_RS24340 () | 3433..4548 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| AW82_RS24345 () | 4817..5425 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| AW82_RS24350 () | 5430..5951 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| AW82_RS24355 () | 5954..6475 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| AW82_RS24360 () | 6572..7045 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| AW82_RS24365 () | 7056..7349 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| AW82_RS24370 () | 7354..8208 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| AW82_RS24375 () | 8208..9167 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| AW82_RS24380 () | 9183..10043 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| AW82_RS24385 () | 10077..10505 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| AW82_RS24390 () | 10562..10921 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| AW82_RS24395 () | 10921..11367 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| AW82_RS24400 () | 11364..11882 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| AW82_RS24405 () | 11882..12112 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| AW82_RS24410 () | 12099..12956 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| AW82_RS24420 () | 13187..13714 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| AW82_RS24425 () | 13772..14044 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| AW82_RS24430 () | 14132..14425 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| AW82_RS24435 () | 14452..14754 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| AW82_RS24440 () | 14759..15109 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AW82_RS24445 () | 15272..15820 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| AW82_RS24455 () | 16161..16355 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| AW82_RS24460 () | 16366..16737 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| AW82_RS24465 () | 16730..17200 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| AW82_RS24470 () | 17215..17550 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| AW82_RS24475 () | 17647..18135 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| AW82_RS24480 () | 18138..18635 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| AW82_RS24490 () | 18850..19554 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AW82_RS24495 () | 19619..19798 | - | 180 | Protein_32 | helix-turn-helix transcriptional regulator | - |
| AW82_RS24500 () | 20105..20809 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AW82_RS25155 () | 20815..20955 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| AW82_RS24510 () | 21441..22178 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| AW82_RS24515 () | 22175..22399 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| AW82_RS24520 () | 22610..24103 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| AW82_RS25240 () | 24572..25018 | + | 447 | Protein_38 | DUF3363 domain-containing protein | - |
| AW82_RS24530 () | 25235..26449 | + | 1215 | WP_000214123.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| AW82_RS24535 () | 26477..26782 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| AW82_RS24540 () | 26894..27082 | + | 189 | Protein_41 | IS91 family transposase | - |
| AW82_RS24545 () | 27049..28248 | - | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| AW82_RS24550 () | 28354..29004 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| AW82_RS24555 () | 29036..29278 | - | 243 | WP_000844627.1 | transposase | - |
| AW82_RS24565 () | 29584..30420 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| AW82_RS24570 () | 30420..31223 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| AW82_RS24575 () | 31284..32099 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| AW82_RS24585 () | 32406..32717 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| AW82_RS24590 () | 32891..33676 | + | 786 | WP_001151304.1 | ParA family protein | - |
| AW82_RS24595 () | 33680..34861 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| AW82_RS24600 () | 34910..35182 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| AW82_RS24605 () | 35235..35870 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| AW82_RS25165 () | 35962..36105 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| AW82_RS24610 () | 36432..36809 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| AW82_RS25245 () | 36802..37083 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| AW82_RS24620 () | 37058..37732 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| AW82_RS24625 () | 37800..38231 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| AW82_RS24630 () | 38237..38548 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| AW82_RS24635 () | 38557..39057 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| AW82_RS24640 () | 39061..40488 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| AW82_RS24645 () | 40488..41144 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| AW82_RS24650 () | 41200..41817 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| AW82_RS24660 () | 42029..42328 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| AW82_RS24665 () | 42419..42907 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| AW82_RS24670 () | 42922..45114 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| AW82_RS24675 () | 45114..45347 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| AW82_RS24680 () | 45329..45946 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| AW82_RS24685 () | 46114..49086 | + | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| AW82_RS24690 () | 49083..50948 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| AW82_RS24695 () | 50959..51543 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| AW82_RS24700 () | 51500..52129 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| AW82_RS24705 () | 52139..52585 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| AW82_RS24710 () | 52595..52972 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| AW82_RS24715 () | 52972..53634 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| AW82_RS24720 () | 53958..54335 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| AW82_RS24725 () | 54480..54761 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| AW82_RS24730 () | 54758..55384 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| AW82_RS24735 () | 55368..56285 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| AW82_RS24740 () | 56285..57598 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| AW82_RS24745 () | 57595..58173 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AW82_RS24750 () | 58177..58569 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| AW82_RS24755 () | 58854..59813 | + | 960 | Protein_82 | IS1380-like element ISEc9 family transposase | - |
| AW82_RS24760 () | 59813..60514 | - | 702 | Protein_83 | conjugal transfer protein TraC | - |
| AW82_RS24765 () | 60511..61218 | - | 708 | WP_001259346.1 | DsbC family protein | - |
| AW82_RS24770 () | 61367..66853 | - | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| AW82_RS24780 () | 67581..67898 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| AW82_RS24785 () | 67895..68428 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| AW82_RS24790 () | 68522..69667 | - | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| AW82_RS24795 () | 69991..70299 | - | 309 | Protein_89 | IS1380 family transposase | - |
| AW82_RS24800 () | 70486..71748 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| AW82_RS24805 () | 72072..73217 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| AW82_RS24810 () | 73311..73844 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| AW82_RS24815 () | 73841..74158 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| AW82_RS24825 () | 74886..80372 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| AW82_RS24830 () | 80521..81228 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| AW82_RS24835 () | 81225..83672 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| AW82_RS24840 () | 83687..84004 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| AW82_RS24845 () | 84001..84531 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| AW82_RS24850 () | 84494..85759 | + | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| AW82_RS24855 () | 85756..86427 | + | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| AW82_RS24860 () | 86424..87404 | + | 981 | Protein_101 | TraU family protein | - |
| AW82_RS24865 () | 87455..88159 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AW82_RS24870 () | 88222..88926 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| AW82_RS24875 () | 89136..90125 | - | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| AW82_RS24880 () | 90122..90358 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| AW82_RS24885 () | 90355..90720 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| AW82_RS24890 () | 90832..91470 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| AW82_RS24895 () | 91485..93170 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| AW82_RS24900 () | 93242..93517 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| AW82_RS24905 () | 93533..93883 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| AW82_RS24910 () | 93955..94389 | + | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| AW82_RS24915 () | 94489..95493 | + | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| AW82_RS24920 () | 95770..95889 | + | 120 | Protein_113 | permease | - |
| AW82_RS25180 () | 95899..96015 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| AW82_RS24925 () | 96136..96510 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| AW82_RS24930 () | 96624..97349 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| AW82_RS24940 () | 97482..101735 | + | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| AW82_RS24945 () | 101707..102147 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| AW82_RS24950 () | 102318..102770 | + | 453 | Protein_119 | hypothetical protein | - |
| AW82_RS24955 () | 102786..103388 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| AW82_RS24960 () | 103658..103939 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| AW82_RS24970 () | 104238..104774 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| AW82_RS24975 () | 104777..105787 | + | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| AW82_RS24980 () | 105792..106661 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| AW82_RS24985 () | 106658..107149 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| AW82_RS24990 () | 107476..108351 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| AW82_RS24995 () | 108513..109553 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| AW82_RS25005 () | 109840..111351 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| AW82_RS25010 () | 111462..112502 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| AW82_RS25015 () | 112504..113937 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| AW82_RS25020 () | 113950..117564 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| AW82_RS25025 () | 117602..117964 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| AW82_RS25030 () | 118680..118952 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| AW82_RS25035 () | 118952..119485 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| AW82_RS25040 () | 119496..120104 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| AW82_RS25045 () | 120101..120651 | + | 551 | Protein_136 | regulator | - |
| AW82_RS25050 () | 120711..121130 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| AW82_RS25055 () | 121132..121425 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| AW82_RS25060 () | 121442..122425 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|