MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 158213 bp
Accession: NZ_CP025231 Location: 1..158213 Organism: Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1924 Replicon: plasmid pSNE1-1924
Accession: NZ_CP025231 Location: 1..158213 Organism: Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1924 Replicon: plasmid pSNE1-1924
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AW80_RS24555 () | 323..862 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| AW80_RS24560 () | 867..1154 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| AW80_RS24565 () | 1139..2239 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| AW80_RS24580 () | 3276..3710 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| AW80_RS24585 () | 3728..4843 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| AW80_RS24590 () | 5112..5720 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| AW80_RS24595 () | 5725..6246 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| AW80_RS24600 () | 6249..6770 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| AW80_RS24605 () | 6867..7340 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| AW80_RS24610 () | 7351..7644 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| AW80_RS24615 () | 7649..8503 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| AW80_RS24620 () | 8503..9462 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| AW80_RS24625 () | 9478..10338 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| AW80_RS24630 () | 10372..10800 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| AW80_RS24635 () | 10857..11216 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| AW80_RS24640 () | 11216..11662 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| AW80_RS24645 () | 11659..12177 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| AW80_RS24650 () | 12177..12407 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| AW80_RS24655 () | 12394..13251 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| AW80_RS24665 () | 13482..14009 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| AW80_RS24670 () | 14067..14339 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| AW80_RS24675 () | 14427..14720 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| AW80_RS24680 () | 14747..15049 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| AW80_RS24685 () | 15054..15404 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AW80_RS24690 () | 15567..16115 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| AW80_RS24700 () | 16456..16650 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| AW80_RS24705 () | 16661..17032 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| AW80_RS24710 () | 17025..17495 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| AW80_RS24715 () | 17510..17845 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| AW80_RS24720 () | 17942..18430 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| AW80_RS24725 () | 18433..18930 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| AW80_RS24735 () | 19145..19849 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AW80_RS24740 () | 19914..20093 | - | 180 | Protein_32 | helix-turn-helix transcriptional regulator | - |
| AW80_RS24745 () | 20400..21104 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AW80_RS25625 () | 21110..21250 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| AW80_RS24755 () | 21736..22473 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| AW80_RS24760 () | 22470..22694 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| AW80_RS24765 () | 22905..24398 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| AW80_RS25715 () | 24867..25313 | + | 447 | Protein_38 | DUF3363 domain-containing protein | - |
| AW80_RS24775 () | 25530..26744 | + | 1215 | WP_000214123.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| AW80_RS24780 () | 26772..27077 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| AW80_RS24785 () | 27189..27377 | + | 189 | Protein_41 | IS91 family transposase | - |
| AW80_RS24790 () | 27344..28543 | - | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| AW80_RS24795 () | 28649..29299 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| AW80_RS24800 () | 29331..29573 | - | 243 | WP_000844627.1 | transposase | - |
| AW80_RS24810 () | 29879..30715 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| AW80_RS24815 () | 30715..31518 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| AW80_RS24820 () | 31579..32394 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| AW80_RS24830 () | 32701..33012 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| AW80_RS24835 () | 33186..33971 | + | 786 | WP_001151304.1 | ParA family protein | - |
| AW80_RS24840 () | 33975..35156 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| AW80_RS24845 () | 35205..35477 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| AW80_RS24850 () | 35530..36165 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| AW80_RS25635 () | 36257..36400 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| AW80_RS24855 () | 36727..37104 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| AW80_RS25720 () | 37097..37378 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| AW80_RS24865 () | 37353..38027 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| AW80_RS24870 () | 38095..38526 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| AW80_RS24875 () | 38532..38843 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| AW80_RS24880 () | 38852..39352 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| AW80_RS24885 () | 39356..40783 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| AW80_RS24890 () | 40783..41439 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| AW80_RS24895 () | 41495..42112 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| AW80_RS24905 () | 42324..42623 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| AW80_RS24910 () | 42714..43202 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| AW80_RS24915 () | 43217..45409 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| AW80_RS24920 () | 45409..45642 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| AW80_RS24925 () | 45624..46241 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| AW80_RS24930 () | 46409..49381 | + | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| AW80_RS24935 () | 49378..51243 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| AW80_RS24940 () | 51254..51838 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| AW80_RS24945 () | 51795..52424 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| AW80_RS24950 () | 52434..52880 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| AW80_RS24955 () | 52890..53267 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| AW80_RS24960 () | 53267..53929 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| AW80_RS24965 () | 54253..54630 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| AW80_RS24970 () | 54775..55056 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| AW80_RS24975 () | 55053..55679 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| AW80_RS24980 () | 55663..56580 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| AW80_RS24985 () | 56580..57893 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| AW80_RS24990 () | 57890..58468 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AW80_RS24995 () | 58472..58864 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| AW80_RS25000 () | 59149..60108 | + | 960 | Protein_82 | IS1380-like element ISEc9 family transposase | - |
| AW80_RS25005 () | 60108..60809 | - | 702 | Protein_83 | conjugal transfer protein TraC | - |
| AW80_RS25010 () | 60806..61513 | - | 708 | WP_001259346.1 | DsbC family protein | - |
| AW80_RS25015 () | 61662..67148 | - | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| AW80_RS25025 () | 67876..68193 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| AW80_RS25030 () | 68190..68723 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| AW80_RS25035 () | 68817..69962 | - | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| AW80_RS25040 () | 70286..70594 | - | 309 | Protein_89 | IS1380 family transposase | - |
| AW80_RS25045 () | 70781..72043 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| AW80_RS25050 () | 72367..73512 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| AW80_RS25055 () | 73606..74139 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| AW80_RS25060 () | 74136..74453 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| AW80_RS25070 () | 75181..80667 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| AW80_RS25075 () | 80816..81523 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| AW80_RS25080 () | 81520..83967 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| AW80_RS25085 () | 83982..84299 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| AW80_RS25090 () | 84296..84826 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| AW80_RS25095 () | 84789..86054 | + | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| AW80_RS25100 () | 86051..86722 | + | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| AW80_RS25105 () | 86719..87726 | + | 1008 | WP_000983282.1 | TraU family protein | - |
| AW80_RS25110 () | 87830..90637 | + | 2808 | WP_001447718.1 | conjugal transfer mating pair stabilization protein TraN | - |
| AW80_RS25115 () | 90676..91536 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| AW80_RS25120 () | 91659..92300 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| AW80_RS25125 () | 92595..92915 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| AW80_RS25130 () | 93219..93404 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| AW80_RS25135 () | 93624..94592 | + | 969 | WP_000085160.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| AW80_RS25140 () | 94603..95511 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| AW80_RS25145 () | 95572..96102 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| AW80_RS25150 () | 96197..97186 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| AW80_RS25155 () | 97249..98259 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| AW80_RS25165 () | 98459..99736 | + | 1278 | WP_000170087.1 | DUF3150 domain-containing protein | - |
| AW80_RS25170 () | 99821..101617 | + | 1797 | WP_000039319.1 | VWA domain-containing protein | - |
| AW80_RS25175 () | 101679..102014 | + | 336 | WP_001447572.1 | hypothetical protein | - |
| AW80_RS25180 () | 102279..102818 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| AW80_RS25185 () | 102909..103409 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| AW80_RS25190 () | 103483..104367 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| AW80_RS25195 () | 104433..104657 | + | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| AW80_RS25200 () | 104719..105108 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| AW80_RS25205 () | 105098..105550 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| AW80_RS25215 () | 105888..106079 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| AW80_RS25220 () | 106124..106501 | + | 378 | WP_001337696.1 | hypothetical protein | - |
| AW80_RS25225 () | 106693..107037 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| AW80_RS25230 () | 107115..107417 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| AW80_RS25235 () | 107495..109120 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| AW80_RS25240 () | 109181..109612 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| AW80_RS25245 () | 109686..110240 | + | 555 | WP_001093867.1 | hypothetical protein | - |
| AW80_RS25250 () | 110473..110859 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| AW80_RS25255 () | 110947..113400 | + | 2454 | WP_001187969.1 | phosphoadenosine phosphosulfate reductase | - |
| AW80_RS25260 () | 113602..113805 | + | 204 | WP_000050847.1 | hypothetical protein | - |
| AW80_RS25265 () | 113877..114482 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| AW80_RS25270 () | 114475..114744 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| AW80_RS25275 () | 114758..114976 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| AW80_RS25280 () | 115050..115607 | + | 558 | WP_000064432.1 | hypothetical protein | - |
| AW80_RS25285 () | 115682..116533 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| AW80_RS25290 () | 116992..117378 | + | 387 | WP_001077336.1 | hypothetical protein | - |
| AW80_RS25295 () | 117556..119283 | + | 1728 | WP_000122922.1 | toprim domain-containing protein | - |
| AW80_RS25300 () | 119270..119548 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| AW80_RS25305 () | 119621..119842 | + | 222 | WP_000714163.1 | hypothetical protein | - |
| AW80_RS25310 () | 120024..121028 | - | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| AW80_RS25315 () | 121107..123011 | - | 1905 | Protein_141 | Tn3 family transposase | - |
| AW80_RS25320 () | 123067..123771 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| AW80_RS25325 () | 123834..124538 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| AW80_RS25330 () | 124748..125737 | - | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| AW80_RS25335 () | 125734..125970 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| AW80_RS25340 () | 125967..126332 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| AW80_RS25345 () | 126444..127082 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| AW80_RS25350 () | 127097..128782 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| AW80_RS25355 () | 128854..129129 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| AW80_RS25360 () | 129145..129495 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| AW80_RS25365 () | 129567..130001 | + | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| AW80_RS25370 () | 130101..131105 | + | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| AW80_RS25375 () | 131382..131501 | + | 120 | Protein_153 | permease | - |
| AW80_RS25655 () | 131511..131627 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| AW80_RS25380 () | 131748..132122 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| AW80_RS25385 () | 132236..132961 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| AW80_RS25395 () | 133094..137347 | + | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| AW80_RS25400 () | 137319..137759 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| AW80_RS25405 () | 137930..138382 | + | 453 | Protein_159 | hypothetical protein | - |
| AW80_RS25410 () | 138398..139000 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| AW80_RS25415 () | 139270..139551 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| AW80_RS25425 () | 139850..140386 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| AW80_RS25430 () | 140389..141399 | + | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| AW80_RS25435 () | 141404..142273 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| AW80_RS25440 () | 142270..142761 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| AW80_RS25445 () | 143088..143963 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| AW80_RS25450 () | 144125..145165 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| AW80_RS25460 () | 145452..146963 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| AW80_RS25465 () | 147074..148114 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| AW80_RS25470 () | 148116..149549 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| AW80_RS25475 () | 149562..153176 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| AW80_RS25480 () | 153214..153576 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| AW80_RS25485 () | 154292..154564 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| AW80_RS25490 () | 154564..155097 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| AW80_RS25495 () | 155108..155716 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| AW80_RS25500 () | 155713..156263 | + | 551 | Protein_176 | regulator | - |
| AW80_RS25505 () | 156323..156742 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| AW80_RS25510 () | 156744..157037 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| AW80_RS25515 () | 157054..158037 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|