MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 33245 bp
Accession: NZ_CP024821 Location: 3846425..3879669 Organism: Escherichia coli strain CREC-591 Replicon: chromosome
Accession: NZ_CP024821 Location: 3846425..3879669 Organism: Escherichia coli strain CREC-591 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CU078_RS20325 () | 3842733..3843875 | + | 1143 | WP_000388786.1 | DNA-binding protein | - |
| CU078_RS20330 () | 3843882..3844646 | - | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| CU078_RS20335 () | 3844897..3846396 | + | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| CU078_RS20340 () | 3846396..3847448 | + | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| CU078_RS20345 () | 3847459..3848682 | + | 1224 | WP_001194672.1 | glycolate oxidase subunit GlcF | - |
| CU078_RS20350 () | 3848687..3849091 | + | 405 | WP_000853256.1 | protein GlcG | - |
| CU078_RS20355 () | 3849113..3851284 | + | 2172 | WP_000084064.1 | malate synthase G | - |
| CU078_RS20360 () | 3851640..3853322 | + | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| CU078_RS20370 () | 3853808..3854218 | + | 411 | Protein_3687 | hypothetical protein | - |
| CU078_RS20375 () | 3854215..3854490 | + | 276 | Protein_3688 | hypothetical protein | VF |
| CU078_RS20380 () | 3854866..3855015 | - | 150 | WP_000132652.1 | hypothetical protein | - |
| CU078_RS20385 () | 3855491..3856219 | + | 729 | WP_000723272.1 | porin family protein | - |
| CU078_RS20390 () | 3856379..3857878 | + | 1500 | WP_001347976.1 | phosphoethanolamine transferase | - |
| CU078_RS20395 () | 3857987..3861502 | - | 3516 | WP_000344096.1 | ATP-binding protein | - |
| CU078_RS20405 () | 3861954..3863216 | - | 1263 | WP_001218875.1 | Prophage integrase IntS ; Integrase | Integrase |
| CU078_RS20410 () | 3863680..3864006 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CU078_RS20415 () | 3864003..3864266 | - | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| CU078_RS20420 () | 3864338..3865204 | - | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| CU078_RS20425 () | 3865289..3865486 | - | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| CU078_RS20430 () | 3865498..3865986 | - | 489 | WP_000761676.1 | hypothetical protein | - |
| CU078_RS20435 () | 3865983..3866360 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| CU078_RS20440 () | 3866407..3866781 | - | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CU078_RS20445 () | 3866861..3867082 | - | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| CU078_RS20450 () | 3867145..3867621 | - | 477 | WP_001366855.1 | RadC family protein | - |
| CU078_RS20455 () | 3867637..3868116 | - | 480 | WP_000844100.1 | antirestriction protein | - |
| CU078_RS20460 () | 3868198..3869015 | - | 818 | Protein_3704 | DUF932 domain-containing protein | - |
| CU078_RS20465 () | 3869105..3869338 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| CU078_RS20470 () | 3869344..3870021 | - | 678 | WP_001097302.1 | hypothetical protein | - |
| CU078_RS20475 () | 3870169..3870849 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| CU078_RS20480 () | 3871052..3871936 | - | 885 | WP_000010402.1 | 50S ribosome-binding GTPase | - |
| CU078_RS20485 () | 3872121..3873251 | + | 1131 | WP_072644952.1 | hypothetical protein | - |
| CU078_RS20500 () | 3874738..3875469 | + | 732 | WP_072644950.1 | inovirus Gp2 family protein | - |
| CU078_RS20505 () | 3875893..3876597 | - | 705 | WP_001389195.1 | toll/interleukin-1 receptor domain-containing protein | - |
| CU078_RS20515 () | 3879479..3880045 | + | 567 | WP_072644949.1 | inovirus-type Gp2 protein | - |
| CU078_RS20520 () | 3880303..3880863 | + | 561 | WP_077890880.1 | hypothetical protein | - |
| CU078_RS20525 () | 3880932..3881162 | + | 231 | WP_001389194.1 | AlpA family transcriptional regulator | - |
| CU078_RS20535 () | 3881430..3881930 | + | 501 | WP_001167446.1 | hypothetical protein | - |
| CU078_RS20540 () | 3882019..3882204 | + | 186 | WP_001389193.1 | hypothetical protein | - |
| CU078_RS20545 () | 3882182..3883860 | + | 1679 | Protein_3718 | type VI secretion system baseplate subunit TssF | - |
| CU078_RS20550 () | 3883824..3884669 | + | 846 | WP_000439135.1 | type VI secretion system baseplate subunit TssG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|