MGE detailed information
MGE type: Genomic_island MGE length: 66057 bp
Accession: NZ_CP024720 Location: 376088..442144 Organism: Escherichia coli isolate NQ3 Replicon: chromosome
Accession: NZ_CP024720 Location: 376088..442144 Organism: Escherichia coli isolate NQ3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUB98_RS02005 () | 372062..372598 | + | 537 | WP_000942771.1 | GspM family type II secretion system protein YghD | - |
| CUB98_RS02015 () | 373656..374432 | + | 777 | WP_000124287.1 | ABC transporter permease | - |
| CUB98_RS02020 () | 374429..375103 | + | 675 | WP_000590243.1 | ABC transporter ATP-binding protein | - |
| CUB98_RS02025 () | 375481..375637 | + | 157 | Protein_367 | transposase | - |
| CUB98_RS02030 () | 376088..376804 | + | 717 | WP_000634338.1 | hypothetical protein | - |
| CUB98_RS02035 () | 377239..378927 | + | 1689 | WP_022645101.1 | hypothetical protein | VF |
| CUB98_RS02040 () | 379024..380058 | - | 1035 | Protein_370 | IS481 family transposase | - |
| CUB98_RS02045 () | 380219..381781 | + | 1563 | WP_001305085.1 | hypothetical protein | VF |
| CUB98_RS02050 () | 381823..383001 | + | 1179 | WP_001305084.1 | hypothetical protein | VF |
| CUB98_RS02055 () | 383340..384509 | - | 1170 | WP_001161856.1 | Glutarate-semialdehyde dehydrogenase DavD | VF |
| CUB98_RS02060 () | 384544..386571 | - | 2028 | WP_000579513.1 | 4-aminobutyrate aminotransferase PuuE | VF |
| CUB98_RS02065 () | 386568..387308 | - | 741 | WP_000030749.1 | HTH-type transcriptional regulatory protein GabR | VF |
| CUB98_RS02070 () | 387318..388994 | - | 1677 | WP_001305083.1 | hypothetical protein | VF |
| CUB98_RS02075 () | 389018..390166 | - | 1149 | WP_000905920.1 | Transcriptional regulator KdgR | VF |
| CUB98_RS02080 () | 390238..391221 | - | 984 | WP_001296394.1 | hypothetical protein | VF |
| CUB98_RS02085 () | 392032..392187 | - | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| CUB98_RS02095 () | 392619..393552 | - | 934 | Protein_380 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| CUB98_RS02100 () | 393545..393940 | - | 396 | WP_000208384.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| CUB98_RS02105 () | 394009..394854 | - | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| CUB98_RS02110 () | 394939..395136 | - | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| CUB98_RS02115 () | 395153..395641 | - | 489 | WP_000761699.1 | hypothetical protein | - |
| CUB98_RS02120 () | 395638..396015 | - | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| CUB98_RS02125 () | 396104..396472 | - | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CUB98_RS02130 () | 396522..397166 | - | 645 | WP_000094916.1 | hypothetical protein | - |
| CUB98_RS02135 () | 397185..397406 | - | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| CUB98_RS02140 () | 397469..397945 | - | 477 | WP_001186726.1 | RadC family protein | - |
| CUB98_RS02145 () | 397961..398446 | - | 486 | WP_000849565.1 | antirestriction protein | - |
| CUB98_RS02150 () | 398501..399319 | - | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| CUB98_RS02160 () | 399420..399653 | - | 234 | WP_000902034.1 | DUF905 family protein | - |
| CUB98_RS02165 () | 399732..400187 | - | 456 | WP_000581502.1 | hypothetical protein | - |
| CUB98_RS02170 () | 400263..401390 | - | 1128 | Protein_394 | hypothetical protein | - |
| CUB98_RS02175 () | 401485..404607 | - | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| CUB98_RS02180 () | 404941..405813 | - | 873 | WP_001069668.1 | GTPase family protein | - |
| CUB98_RS02195 () | 407145..408635 | + | 1491 | WP_001305029.1 | DUF3987 domain-containing protein | - |
| CUB98_RS02200 () | 408756..409328 | - | 573 | WP_001296389.1 | hypothetical protein | - |
| CUB98_RS02205 () | 409414..409620 | - | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| CUB98_RS02215 () | 410568..410717 | + | 150 | WP_071528377.1 | hemolysin activation protein | - |
| CUB98_RS02230 () | 411446..412015 | + | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| CUB98_RS02235 () | 412182..412565 | + | 384 | WP_000271011.1 | hypothetical protein | - |
| CUB98_RS28100 () | 412562..412747 | + | 186 | Protein_403 | zinc-ribbon domain-containing protein | - |
| CUB98_RS02245 () | 412786..414324 | - | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| CUB98_RS02250 () | 414324..415421 | - | 1098 | Protein_405 | IS66 family transposase IS682 | Transposase |
| CUB98_RS02255 () | 415452..415802 | - | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| CUB98_RS02260 () | 415799..416224 | - | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| CUB98_RS02270 () | 416596..416733 | - | 138 | WP_085949591.1 | transposase domain-containing protein | - |
| CUB98_RS02275 () | 416885..417802 | + | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| CUB98_RS02280 () | 417836..418711 | + | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| CUB98_RS02285 () | 418760..420232 | + | 1473 | WP_000376547.1 | MFS transporter | - |
| CUB98_RS02290 () | 420236..421066 | + | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| CUB98_RS02295 () | 421112..421822 | + | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| CUB98_RS02300 () | 421835..422944 | + | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| CUB98_RS02305 () | 422994..423929 | + | 936 | WP_001305022.1 | alpha/beta hydrolase | - |
| CUB98_RS02310 () | 423965..424699 | - | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| CUB98_RS02315 () | 424799..425785 | + | 987 | WP_000274668.1 | hypothetical protein | - |
| CUB98_RS02320 () | 425937..427165 | + | 1229 | WP_096928816.1 | IS3 family transposase IS2 | Transposase |
| CUB98_RS02335 () | 427665..429755 | + | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| CUB98_RS27820 () | 429973..430132 | - | 160 | Protein_420 | transposase domain-containing protein | - |
| CUB98_RS02345 () | 430617..430859 | + | 243 | WP_001296383.1 | hypothetical protein | - |
| CUB98_RS02355 () | 431150..431509 | + | 360 | WP_001296382.1 | hypothetical protein | - |
| CUB98_RS02360 () | 431513..431728 | + | 216 | WP_000266542.1 | hypothetical protein | - |
| CUB98_RS02370 () | 432306..432628 | - | 323 | Protein_424 | transposase | - |
| CUB98_RS02375 () | 432648..433157 | + | 510 | Protein_425 | L-lactate permease | - |
| CUB98_RS02380 () | 433191..434723 | - | 1533 | Protein_426 | IS3 family transposase | - |
| CUB98_RS02390 () | 435139..435561 | - | 423 | Protein_427 | hypothetical protein | - |
| CUB98_RS02395 () | 435606..436496 | - | 891 | Protein_428 | IS3 family transposase ISSd1 | Transposase |
| CUB98_RS02400 () | 436509..437660 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| CUB98_RS02405 () | 437725..437985 | - | 261 | Protein_430 | IS3 family transposase ISSfl10 | Transposase |
| CUB98_RS02410 () | 438257..442144 | - | 3888 | WP_001034083.1 | 4-hydroxyproline 2-epimerase | VF |
| CUB98_RS28105 () | 442394..442537 | + | 144 | WP_011076574.1 | hypothetical protein | - |
| CUB98_RS02420 () | 443088..445289 | - | 2202 | WP_000973516.1 | ferric aerobactin receptor IutA | - |
| CUB98_RS02425 () | 445371..446648 | - | 1278 | WP_000750130.1 | NADPH-dependent L-lysine N(6)-monooxygenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|