MGE detailed information
MGE type: Genomic_island MGE length: 66057 bp
Accession: NZ_CP024717 Location: 3327446..3393502 Organism: Escherichia coli strain LS4 Replicon: chromosome
Accession: NZ_CP024717 Location: 3327446..3393502 Organism: Escherichia coli strain LS4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUB99_RS17420 () | 3323420..3323956 | + | 537 | WP_000942771.1 | GspM family type II secretion system protein YghD | - |
| CUB99_RS17430 () | 3325014..3325790 | + | 777 | WP_000124287.1 | ABC transporter permease | - |
| CUB99_RS17435 () | 3325787..3326461 | + | 675 | WP_000590243.1 | ABC transporter ATP-binding protein | - |
| CUB99_RS17440 () | 3326839..3326995 | + | 157 | Protein_3188 | transposase | - |
| CUB99_RS17445 () | 3327446..3328162 | + | 717 | WP_000634338.1 | hypothetical protein | - |
| CUB99_RS17450 () | 3328597..3330285 | + | 1689 | WP_022645101.1 | hypothetical protein | VF |
| CUB99_RS17455 () | 3330382..3331416 | - | 1035 | Protein_3191 | IS481 family transposase | - |
| CUB99_RS17460 () | 3331577..3333139 | + | 1563 | WP_001305085.1 | UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD | VF |
| CUB99_RS17465 () | 3333181..3334359 | + | 1179 | WP_001305084.1 | UDP-glucose 6-dehydrogenase | VF |
| CUB99_RS17470 () | 3334698..3335867 | - | 1170 | WP_001161856.1 | hypothetical protein | VF |
| CUB99_RS17475 () | 3335902..3337929 | - | 2028 | WP_000579513.1 | hypothetical protein | VF |
| CUB99_RS17480 () | 3337926..3338666 | - | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| CUB99_RS17485 () | 3338676..3340352 | - | 1677 | WP_001305083.1 | Polysialic acid transport protein KpsD | VF |
| CUB99_RS17490 () | 3340376..3341524 | - | 1149 | WP_000905920.1 | hypothetical protein | VF |
| CUB99_RS17495 () | 3341596..3342579 | - | 984 | WP_001296394.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| CUB99_RS17500 () | 3343390..3343545 | - | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| CUB99_RS17510 () | 3343977..3344910 | - | 934 | Protein_3201 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| CUB99_RS17515 () | 3344903..3345298 | - | 396 | WP_000208384.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| CUB99_RS17520 () | 3345367..3346212 | - | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| CUB99_RS17525 () | 3346297..3346494 | - | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| CUB99_RS17530 () | 3346511..3346999 | - | 489 | WP_000761699.1 | hypothetical protein | - |
| CUB99_RS17535 () | 3346996..3347373 | - | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| CUB99_RS17540 () | 3347462..3347830 | - | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CUB99_RS17545 () | 3347880..3348524 | - | 645 | WP_000094916.1 | hypothetical protein | - |
| CUB99_RS17550 () | 3348543..3348764 | - | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| CUB99_RS17555 () | 3348827..3349303 | - | 477 | WP_001186726.1 | RadC family protein | - |
| CUB99_RS17560 () | 3349319..3349804 | - | 486 | WP_000849565.1 | antirestriction protein | - |
| CUB99_RS17565 () | 3349859..3350677 | - | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| CUB99_RS17575 () | 3350778..3351011 | - | 234 | WP_000902034.1 | DUF905 family protein | - |
| CUB99_RS17580 () | 3351090..3351545 | - | 456 | WP_000581502.1 | hypothetical protein | - |
| CUB99_RS17585 () | 3351621..3352748 | - | 1128 | Protein_3215 | hypothetical protein | - |
| CUB99_RS17590 () | 3352843..3355965 | - | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| CUB99_RS17595 () | 3356299..3357171 | - | 873 | WP_001069668.1 | GTPase family protein | - |
| CUB99_RS17610 () | 3358503..3359993 | + | 1491 | WP_001305029.1 | DUF3987 domain-containing protein | - |
| CUB99_RS17615 () | 3360114..3360686 | - | 573 | WP_001296389.1 | hypothetical protein | - |
| CUB99_RS17620 () | 3360772..3360978 | - | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| CUB99_RS17630 () | 3361926..3362075 | + | 150 | WP_071528377.1 | hemolysin activation protein | - |
| CUB99_RS17645 () | 3362804..3363373 | + | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| CUB99_RS17650 () | 3363540..3363923 | + | 384 | WP_000271011.1 | hypothetical protein | - |
| CUB99_RS28195 () | 3363920..3364105 | + | 186 | Protein_3224 | zinc-ribbon domain-containing protein | - |
| CUB99_RS17660 () | 3364144..3365682 | - | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| CUB99_RS17665 () | 3365682..3366779 | - | 1098 | Protein_3226 | IS66 family transposase IS682 | Transposase |
| CUB99_RS17670 () | 3366810..3367160 | - | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| CUB99_RS17675 () | 3367157..3367582 | - | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| CUB99_RS17685 () | 3367954..3368091 | - | 138 | WP_085949591.1 | transposase domain-containing protein | - |
| CUB99_RS17690 () | 3368243..3369160 | + | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| CUB99_RS17695 () | 3369194..3370069 | + | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| CUB99_RS17700 () | 3370118..3371590 | + | 1473 | WP_000376547.1 | MFS transporter | - |
| CUB99_RS17705 () | 3371594..3372424 | + | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| CUB99_RS17710 () | 3372470..3373180 | + | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| CUB99_RS17715 () | 3373193..3374302 | + | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| CUB99_RS17720 () | 3374352..3375287 | + | 936 | WP_001305022.1 | alpha/beta hydrolase | - |
| CUB99_RS17725 () | 3375323..3376057 | - | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| CUB99_RS17730 () | 3376157..3377143 | + | 987 | WP_000274668.1 | hypothetical protein | - |
| CUB99_RS17735 () | 3377295..3378523 | + | 1229 | WP_096928816.1 | IS3 family transposase IS2 | Transposase |
| CUB99_RS17750 () | 3379023..3381113 | + | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| CUB99_RS27960 () | 3381331..3381490 | - | 160 | Protein_3241 | transposase domain-containing protein | - |
| CUB99_RS17760 () | 3381975..3382217 | + | 243 | WP_001296383.1 | hypothetical protein | - |
| CUB99_RS17770 () | 3382508..3382867 | + | 360 | WP_001296382.1 | hypothetical protein | - |
| CUB99_RS17775 () | 3382871..3383086 | + | 216 | WP_000266542.1 | hypothetical protein | - |
| CUB99_RS17785 () | 3383664..3383986 | - | 323 | Protein_3245 | transposase | - |
| CUB99_RS17790 () | 3384006..3384515 | + | 510 | Protein_3246 | L-lactate permease | - |
| CUB99_RS17795 () | 3384549..3386081 | - | 1533 | Protein_3247 | IS3 family transposase | - |
| CUB99_RS17805 () | 3386497..3386919 | - | 423 | Protein_3248 | hypothetical protein | - |
| CUB99_RS17810 () | 3386964..3387854 | - | 891 | Protein_3249 | IS3 family transposase ISSd1 | Transposase |
| CUB99_RS17815 () | 3387867..3389018 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| CUB99_RS17820 () | 3389083..3389343 | - | 261 | Protein_3251 | IS3 family transposase ISSfl10 | Transposase |
| CUB99_RS17825 () | 3389615..3393502 | - | 3888 | WP_001034083.1 | Serine protease sat autotransporter | VF |
| CUB99_RS28200 () | 3393752..3393895 | + | 144 | WP_011076574.1 | hypothetical protein | - |
| CUB99_RS17835 () | 3394446..3396647 | - | 2202 | WP_000973516.1 | ferric aerobactin receptor IutA | - |
| CUB99_RS17840 () | 3396729..3398006 | - | 1278 | WP_000750130.1 | NADPH-dependent L-lysine N(6)-monooxygenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|