MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 48379 bp
Accession: NZ_CP024711 Location: 1873274..1921652 Organism: Dickeya solani strain IFB 0099 Replicon: chromosome
Accession: NZ_CP024711 Location: 1873274..1921652 Organism: Dickeya solani strain IFB 0099 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSOL99_RS08425 () | 1868560..1869234 | + | 675 | WP_022633092.1 | glutathione S-transferase family protein | - |
| DSOL99_RS08430 () | 1869646..1870521 | - | 876 | WP_026594453.1 | alpha/beta hydrolase | - |
| DSOL99_RS08435 () | 1870436..1871653 | - | 1218 | WP_022633094.1 | dienelactone hydrolase family protein | - |
| DSOL99_RS21785 () | 1872055..1872342 | - | 288 | WP_146053333.1 | hypothetical protein | - |
| DSOL99_RS08445 () | 1873805..1874869 | + | 1065 | WP_026594454.1 | DNA cytosine methyltransferase | - |
| DSOL99_RS08450 () | 1874832..1877831 | + | 3000 | WP_080644163.1 | ATP-binding protein | - |
| DSOL99_RS08455 () | 1877833..1879482 | + | 1650 | WP_022633097.1 | hypothetical protein | - |
| DSOL99_RS08460 () | 1879843..1880244 | - | 402 | WP_023637748.1 | hypothetical protein | - |
| DSOL99_RS21790 () | 1880308..1880601 | - | 294 | WP_146053334.1 | hypothetical protein | - |
| DSOL99_RS08465 () | 1880992..1881936 | + | 945 | WP_022633099.1 | DUF1738 domain-containing protein | - |
| DSOL99_RS08470 () | 1882257..1882493 | + | 237 | WP_022633100.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| DSOL99_RS08475 () | 1882496..1882810 | + | 315 | WP_022633101.1 | CcdB family protein | Toxin Detail |
| DSOL99_RS08480 () | 1882807..1883064 | - | 258 | WP_022633102.1 | hypothetical protein | - |
| DSOL99_RS08485 () | 1883240..1884547 | - | 1308 | WP_022633103.1 | type II toxin-antitoxin system HipA family toxin | - |
| DSOL99_RS08490 () | 1884547..1884954 | - | 408 | WP_071598628.1 | helix-turn-helix transcriptional regulator | - |
| DSOL99_RS08500 () | 1885337..1886083 | - | 747 | WP_022633104.1 | hypothetical protein | - |
| DSOL99_RS08505 () | 1886092..1887855 | - | 1764 | Protein_1636 | type IV secretory system conjugative DNA transfer family protein | - |
| DSOL99_RS08515 () | 1888552..1888854 | - | 303 | WP_022633106.1 | KikA | - |
| DSOL99_RS08520 () | 1888895..1889911 | - | 1017 | WP_022633107.1 | hypothetical protein | VF |
| DSOL99_RS08525 () | 1889901..1891109 | - | 1209 | Protein_1639 | hypothetical protein | VF |
| DSOL99_RS08530 () | 1891106..1891996 | - | 891 | WP_022633110.1 | P-type conjugative transfer protein VirB9 | - |
| DSOL99_RS08535 () | 1891996..1892679 | - | 684 | WP_022633111.1 | hypothetical protein | VF |
| DSOL99_RS08540 () | 1892900..1893928 | - | 1029 | WP_022633112.1 | type IV secretion system protein | - |
| DSOL99_RS08545 () | 1893940..1894164 | - | 225 | WP_022633113.1 | EexN family lipoprotein | - |
| DSOL99_RS08550 () | 1894176..1894892 | - | 717 | WP_022633114.1 | type IV secretion system protein | - |
| DSOL99_RS08555 () | 1894918..1897665 | - | 2748 | WP_022633115.1 | hypothetical protein | VF |
| DSOL99_RS08560 () | 1897675..1897950 | - | 276 | WP_012769221.1 | hypothetical protein | VF |
| DSOL99_RS08565 () | 1897970..1898617 | - | 648 | WP_022633116.1 | hypothetical protein | VF |
| DSOL99_RS08570 () | 1898687..1898920 | - | 234 | WP_022633117.1 | hypothetical protein | - |
| DSOL99_RS08575 () | 1899486..1900001 | - | 516 | WP_022633118.1 | NAD(P)H-dependent oxidoreductase | - |
| DSOL99_RS08580 () | 1900021..1900986 | - | 966 | WP_022633119.1 | aldo/keto reductase | - |
| DSOL99_RS08585 () | 1901046..1901912 | - | 867 | WP_022633120.1 | SMP-30/gluconolactonase/LRE family protein | - |
| DSOL99_RS08590 () | 1901995..1902468 | - | 474 | WP_022633121.1 | DMT family transporter | - |
| DSOL99_RS08595 () | 1902480..1903877 | - | 1398 | WP_022633122.1 | amidohydrolase family protein | - |
| DSOL99_RS08600 () | 1904009..1904893 | + | 885 | WP_022633123.1 | HTH-type transcriptional regulator ArgP | VF |
| DSOL99_RS08605 () | 1905157..1905366 | - | 210 | WP_022633124.1 | TraR/DksA family transcriptional regulator | - |
| DSOL99_RS08610 () | 1905356..1905940 | - | 585 | WP_022633125.1 | DUF2857 domain-containing protein | - |
| DSOL99_RS08615 () | 1905957..1906151 | - | 195 | WP_022633126.1 | AlpA family transcriptional regulator | - |
| DSOL99_RS08620 () | 1906827..1907084 | - | 258 | WP_012769229.1 | helix-turn-helix domain-containing protein | - |
| DSOL99_RS08625 () | 1907198..1907476 | - | 279 | WP_012884168.1 | hypothetical protein | VF |
| DSOL99_RS08630 () | 1907610..1907897 | + | 288 | WP_022633127.1 | helix-turn-helix domain-containing protein | - |
| DSOL99_RS08635 () | 1908175..1908420 | - | 246 | WP_013318575.1 | helix-turn-helix transcriptional regulator | - |
| DSOL99_RS08640 () | 1909104..1909622 | + | 519 | WP_022633128.1 | hypothetical protein | VF |
| DSOL99_RS08645 () | 1909735..1911597 | + | 1863 | WP_022633129.1 | hypothetical protein | VF |
| DSOL99_RS08650 () | 1911675..1912115 | + | 441 | WP_023637755.1 | DUF1795 domain-containing protein | - |
| DSOL99_RS08655 () | 1912133..1915963 | + | 3831 | Protein_1665 | PAAR domain-containing protein | - |
| DSOL99_RS08660 () | 1916332..1917177 | + | 846 | WP_023637756.1 | hypothetical protein | - |
| DSOL99_RS21795 () | 1917476..1917622 | + | 147 | WP_155246175.1 | hypothetical protein | - |
| DSOL99_RS08670 () | 1917784..1918710 | - | 927 | WP_022633133.1 | hypothetical protein | - |
| DSOL99_RS08680 () | 1919726..1920037 | + | 312 | WP_022633134.1 | DUF736 domain-containing protein | - |
| DSOL99_RS08685 () | 1920193..1921475 | - | 1283 | Protein_1670 | hypothetical protein ; Integrase | Integrase |
| DSOL99_RS08695 () | 1921822..1922613 | - | 792 | WP_022633137.1 | DgsA anti-repressor MtfA | - |
| DSOL99_RS08705 () | 1923476..1924627 | - | 1152 | WP_022633138.1 | type I restriction enzyme HsdR N-terminal domain-containing protein | - |
| DSOL99_RS08710 () | 1924661..1925050 | - | 390 | WP_023637758.1 | helix-turn-helix domain-containing protein | - |
| DSOL99_RS08715 () | 1925478..1925645 | + | 168 | WP_022633139.1 | YqaE/Pmp3 family membrane protein | - |
| DSOL99_RS08720 () | 1925718..1926272 | - | 555 | WP_022633140.1 | flavodoxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|