MGE detailed information
MGE type: Prophage MGE length: 60896 bp
Accession: NZ_CP024683 Location: 1993637..2054532 Organism: Citrobacter freundii strain UMH13 Replicon: chromosome
Accession: NZ_CP024683 Location: 1993637..2054532 Organism: Citrobacter freundii strain UMH13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CUC45_RS09695 () | 1989046..1989543 | - | 498 | WP_032949473.1 | GAF domain-containing protein | - |
| CUC45_RS09700 () | 1989672..1990955 | + | 1284 | WP_032949474.1 | membrane integrity lipid transport subunit YebS | - |
| CUC45_RS09705 () | 1990924..1993557 | + | 2634 | WP_003034947.1 | PqiB family protein | - |
| CUC45_RS09710 () | 1993670..1995058 | + | 1389 | WP_003034944.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CUC45_RS09715 () | 1995159..1995395 | + | 237 | WP_029139506.1 | DUF1480 family protein | - |
| CUC45_RS09720 () | 1995498..1995689 | + | 192 | WP_003034941.1 | YebW family protein | - |
| CUC45_RS09725 () | 1995690..1996331 | - | 642 | WP_032949476.1 | protein-serine/threonine phosphatase | - |
| CUC45_RS09730 () | 1996672..1996770 | + | 99 | WP_072211991.1 | DinI-like family protein | - |
| CUC45_RS09735 () | 1996883..1997554 | + | 672 | WP_016150083.1 | SOS response-associated peptidase | - |
| CUC45_RS09740 () | 1997905..1998228 | - | 324 | WP_032949478.1 | hypothetical protein | - |
| CUC45_RS09745 () | 1998304..1998771 | - | 468 | WP_032949480.1 | GIY-YIG nuclease family protein | - |
| CUC45_RS24175 () | 1998896..1999186 | + | 291 | WP_199880178.1 | hypothetical protein | - |
| CUC45_RS09755 () | 1999287..1999700 | + | 414 | WP_032949481.1 | hypothetical protein | - |
| CUC45_RS09760 () | 1999996..2000385 | - | 390 | WP_032949482.1 | DNA polymerase V | - |
| CUC45_RS09765 () | 2000532..2000612 | + | 81 | Protein_1857 | DinI family protein | - |
| CUC45_RS09770 () | 2000706..2000948 | + | 243 | WP_032949485.1 | DinI family protein | - |
| CUC45_RS09775 () | 2001127..2002110 | + | 984 | WP_058842356.1 | glycosyltransferase | - |
| CUC45_RS09780 () | 2002183..2002779 | - | 597 | WP_047389153.1 | tail fiber assembly protein | - |
| CUC45_RS09785 () | 2002779..2005358 | - | 2580 | WP_047389155.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CUC45_RS09790 () | 2005399..2008803 | - | 3405 | WP_032949486.1 | host specificity protein J | - |
| CUC45_RS09795 () | 2008876..2009553 | - | 678 | WP_071993038.1 | tail assembly protein | - |
| CUC45_RS09800 () | 2009451..2010185 | - | 735 | WP_032949488.1 | C40 family peptidase | - |
| CUC45_RS09805 () | 2010197..2010892 | - | 696 | WP_032949489.1 | phage minor tail protein L | - |
| CUC45_RS09810 () | 2010901..2011233 | - | 333 | WP_032949490.1 | phage tail protein | - |
| CUC45_RS09815 () | 2011234..2014536 | - | 3303 | WP_032950888.1 | phage tail tape measure protein | - |
| CUC45_RS09825 () | 2014784..2015146 | - | 363 | WP_032949492.1 | phage tail protein | - |
| CUC45_RS09830 () | 2015209..2015691 | - | 483 | WP_032949494.1 | major tail shaft subunit | - |
| CUC45_RS09835 () | 2015725..2016126 | - | 402 | WP_032949495.1 | HK97 gp10 family phage protein | - |
| CUC45_RS09840 () | 2016123..2016512 | - | 390 | WP_032949497.1 | hypothetical protein | - |
| CUC45_RS09845 () | 2016481..2016831 | - | 351 | Protein_1872 | phage head closure protein | - |
| CUC45_RS09850 () | 2016828..2017145 | - | 318 | WP_032950890.1 | head-tail connector protein | - |
| CUC45_RS09855 () | 2017126..2017504 | - | 379 | Protein_1874 | hypothetical protein | - |
| CUC45_RS09860 () | 2017602..2018888 | - | 1287 | WP_121567632.1 | phage major capsid protein | - |
| CUC45_RS09865 () | 2018961..2019881 | - | 921 | WP_032949501.1 | S49 family peptidase | - |
| CUC45_RS09870 () | 2019918..2021177 | - | 1260 | WP_121567633.1 | phage portal protein | - |
| CUC45_RS09875 () | 2021177..2021356 | - | 180 | WP_003832363.1 | hypothetical protein | - |
| CUC45_RS09880 () | 2021350..2023077 | - | 1728 | WP_016150031.1 | terminase large subunit | - |
| CUC45_RS09885 () | 2023074..2023571 | - | 498 | WP_003832359.1 | phage terminase small subunit P27 family | - |
| CUC45_RS09895 () | 2023889..2024251 | - | 363 | WP_032947956.1 | HNH endonuclease | - |
| CUC45_RS09900 () | 2024530..2025069 | + | 540 | WP_032949505.1 | cytochrome b | - |
| CUC45_RS09905 () | 2025427..2025600 | - | 174 | WP_016150028.1 | addiction module toxin, GnsA/GnsB family | - |
| CUC45_RS09910 () | 2025804..2026034 | - | 231 | WP_032938624.1 | hypothetical protein | - |
| CUC45_RS09915 () | 2026108..2026296 | - | 189 | WP_072211990.1 | cold-shock protein | - |
| CUC45_RS09920 () | 2026307..2026519 | - | 213 | WP_016150027.1 | cold-shock protein | - |
| CUC45_RS09925 () | 2026909..2027424 | - | 516 | WP_032949506.1 | DUF2514 domain-containing protein | - |
| CUC45_RS09930 () | 2027424..2027969 | - | 546 | WP_032949507.1 | lysozyme | - |
| CUC45_RS09935 () | 2027941..2028219 | - | 279 | WP_016150024.1 | hypothetical protein | - |
| CUC45_RS09945 () | 2029487..2029702 | - | 216 | WP_003841948.1 | RNA chaperone/antiterminator CspA | - |
| CUC45_RS09950 () | 2029999..2030211 | + | 213 | WP_071992552.1 | cold shock-like protein CspF | - |
| CUC45_RS09955 () | 2030535..2030930 | - | 396 | WP_032938616.1 | antitermination protein | - |
| CUC45_RS09960 () | 2030945..2031985 | - | 1041 | WP_032949508.1 | DUF968 domain-containing protein | - |
| CUC45_RS09965 () | 2031982..2032341 | - | 360 | WP_032949510.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CUC45_RS09970 () | 2032344..2032544 | - | 201 | WP_032949512.1 | hypothetical protein | - |
| CUC45_RS09980 () | 2033445..2034671 | + | 1227 | WP_050593526.1 | hypothetical protein | - |
| CUC45_RS09985 () | 2034717..2035019 | - | 303 | WP_032949514.1 | hypothetical protein | - |
| CUC45_RS09990 () | 2035396..2036139 | + | 744 | WP_032949515.1 | hypothetical protein | - |
| CUC45_RS09995 () | 2036680..2038920 | + | 2241 | WP_050592503.1 | hypothetical protein | - |
| CUC45_RS10000 () | 2039102..2040460 | - | 1359 | WP_032943042.1 | hypothetical protein | - |
| CUC45_RS10005 () | 2040685..2041110 | - | 426 | WP_032943041.1 | PerC family transcriptional regulator | - |
| CUC45_RS10010 () | 2041166..2041576 | - | 411 | WP_032949517.1 | hypothetical protein | - |
| CUC45_RS10015 () | 2041696..2042490 | - | 795 | WP_032943039.1 | DUF1376 domain-containing protein | - |
| CUC45_RS10020 () | 2042545..2043099 | - | 555 | WP_032949518.1 | hypothetical protein | - |
| CUC45_RS10025 () | 2043102..2043317 | - | 216 | WP_032949519.1 | helix-turn-helix domain-containing protein | - |
| CUC45_RS10030 () | 2043419..2043808 | + | 390 | WP_032949520.1 | helix-turn-helix domain-containing protein | - |
| CUC45_RS10035 () | 2044037..2044252 | + | 216 | WP_032943037.1 | hypothetical protein | - |
| CUC45_RS10040 () | 2044310..2044636 | + | 327 | WP_032950892.1 | Rrf2 family transcriptional regulator | - |
| CUC45_RS10045 () | 2044778..2047258 | + | 2481 | WP_050593527.1 | exonuclease | - |
| CUC45_RS10050 () | 2047322..2047582 | + | 261 | WP_072211989.1 | hypothetical protein | - |
| CUC45_RS10055 () | 2047560..2048639 | + | 1080 | WP_032949521.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| - () | 2048769..2048910 | + | 142 | - | - | Antitoxin Detail |
| - () | 2048772..2048875 | - | 104 | - | - | Toxin Detail |
| CUC45_RS10060 () | 2049031..2049369 | - | 339 | WP_003034934.1 | YebY family protein | - |
| CUC45_RS10065 () | 2049390..2050262 | - | 873 | WP_032949522.1 | copper homeostasis membrane protein CopD | - |
| CUC45_RS10070 () | 2050266..2050640 | - | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| CUC45_RS10075 () | 2050784..2051014 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| CUC45_RS10080 () | 2051121..2051777 | + | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| CUC45_RS10085 () | 2051801..2052463 | + | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| CUC45_RS10090 () | 2052454..2054508 | - | 2055 | WP_177711897.1 | oligopeptidase B | - |
| CUC45_RS10095 () | 2054595..2055254 | - | 660 | WP_032949524.1 | tellurite resistance TerB family protein | - |
| CUC45_RS10100 () | 2055349..2055702 | - | 354 | WP_032949525.1 | protein YebF | - |
| CUC45_RS10105 () | 2055824..2056114 | - | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| CUC45_RS10110 () | 2056246..2057424 | + | 1179 | WP_032949526.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CUC45_RS10115 () | 2057491..2058132 | - | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|