MGE detailed information
MGE type: Genomic_island MGE length: 11569 bp
Accession: NZ_CP024479 Location: 3839565..3851133 Organism: Escherichia coli strain 2011C-4315 Replicon: chromosome
Accession: NZ_CP024479 Location: 3839565..3851133 Organism: Escherichia coli strain 2011C-4315 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5958_RS20560 () | 3834566..3835000 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| A5958_RS20565 () | 3835018..3835896 | - | 879 | WP_001298758.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| A5958_RS20570 () | 3835886..3836665 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| A5958_RS20575 () | 3836676..3837149 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| A5958_RS20580 () | 3837172..3838452 | - | 1281 | WP_000681952.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| A5958_RS20590 () | 3838701..3839510 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| A5958_RS20595 () | 3839565..3840029 | - | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| A5958_RS20600 () | 3840029..3840364 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| A5958_RS20605 () | 3840513..3842084 | - | 1572 | WP_001273736.1 | galactarate dehydratase | - |
| A5958_RS20610 () | 3842459..3843793 | + | 1335 | WP_000599627.1 | galactarate/glucarate/glycerate transporter GarP | - |
| A5958_RS20615 () | 3843809..3844579 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| A5958_RS20620 () | 3844609..3845499 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| A5958_RS20625 () | 3845596..3846741 | + | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| A5958_RS20640 () | 3847658..3848845 | - | 1188 | WP_000484573.1 | YhaC family protein | - |
| A5958_RS20645 () | 3848867..3849406 | - | 540 | WP_000675746.1 | hypothetical protein | - |
| A5958_RS30235 () | 3849662..3849880 | - | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| A5958_RS20655 () | 3850195..3851133 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| A5958_RS20665 () | 3851232..3852221 | + | 990 | WP_000548342.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| A5958_RS20670 () | 3852243..3853574 | + | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| A5958_RS20675 () | 3853600..3854808 | + | 1209 | WP_001507945.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|