MGE detailed information
MGE type: IScluster/Tn MGE length: 21807 bp
Accession: NZ_CP024476 Location: 11601..33407 Organism: Shigella flexneri 7b strain 94-3007 Replicon: plasmid unnamed3
Accession: NZ_CP024476 Location: 11601..33407 Organism: Shigella flexneri 7b strain 94-3007 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ98_RS24280 | 6748..6936 | - | 189 | WP_000957853.1 | hypothetical protein | - |
| CPZ98_RS24290 | 7338..11432 | + | 4095 | WP_001034121.1 | serine protease autotransporter toxin SepA | - |
| CPZ98_RS24295 | 11601..12215 | - | 615 | Protein_9 | IS21 family transposase ISEc10 | Transposase |
| CPZ98_RS24300 | 12247..12657 | - | 411 | Protein_10 | IS66 family transposase ISEc47 | Transposase |
| CPZ98_RS24305 | 12701..13910 | - | 1210 | Protein_11 | IS3 family transposase | - |
| CPZ98_RS24310 | 13960..14579 | - | 620 | Protein_12 | IS1 family transposase IS1X2 | Transposase |
| CPZ98_RS24315 | 14983..16437 | + | 1455 | WP_075332747.1 | hypothetical protein | VF |
| CPZ98_RS25775 | 16586..16714 | - | 129 | Protein_14 | IS5/IS1182 family transposase | - |
| CPZ98_RS24335 | 18074..18346 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| CPZ98_RS24345 | 18618..18920 | + | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CPZ98_RS24350 | 18911..19393 | + | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CPZ98_RS24355 | 19461..19984 | + | 524 | Protein_19 | IS3 family transposase ISSfl11 | Transposase |
| CPZ98_RS24360 | 20027..21236 | - | 1210 | Protein_20 | IS3 family transposase | - |
| CPZ98_RS24365 | 21288..22979 | - | 1692 | WP_134797093.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| CPZ98_RS24380 | 24633..25829 | + | 1197 | WP_039070165.1 | IS110 family transposase ISSfl4 | Transposase |
| CPZ98_RS24390 | 26977..27243 | - | 267 | WP_000957712.1 | hypothetical protein | VF |
| CPZ98_RS24395 | 27425..27826 | - | 402 | Protein_26 | integrase core domain-containing protein | - |
| CPZ98_RS24400 | 28255..29043 | + | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| CPZ98_RS24405 | 29036..29407 | - | 372 | Protein_28 | IS21 family transposase IS100 | Transposase |
| CPZ98_RS24410 | 29406..30160 | + | 755 | Protein_29 | IS3 family transposase IS150 | Transposase |
| CPZ98_RS24420 | 31541..31729 | - | 189 | WP_000957853.1 | hypothetical protein | - |
| CPZ98_RS24425 | 31845..32141 | + | 297 | Protein_32 | DDE-type integrase/transposase/recombinase | - |
| CPZ98_RS24430 | 32198..33407 | + | 1210 | Protein_33 | IS3 family transposase | - |
| CPZ98_RS24435 | 33444..33623 | + | 180 | Protein_34 | transposase | - |
| CPZ98_RS26690 | 33940..34278 | - | 339 | WP_227804374.1 | hypothetical protein | - |
| CPZ98_RS24445 | 34200..35327 | + | 1128 | WP_005064883.1 | group II intron reverse transcriptase/maturase | - |
| CPZ98_RS24450 | 35410..35589 | + | 180 | Protein_37 | transposase domain-containing protein | - |
| CPZ98_RS24455 | 35616..36101 | - | 486 | WP_000003223.1 | IS110 family transposase | - |
| CPZ98_RS24460 | 36357..37337 | - | 981 | WP_000431558.1 | ParB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|