MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 184894 bp
Accession: NZ_CP024469        Location: 1..184894         Organism: Shigella dysenteriae strain BU53M1       Replicon: plasmid unnamed3


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CPZ97_RS25375 () 1082..1882 + 801 Protein_1 IS3 family transposase -
CPZ97_RS28095 () 1997..2338 + 342 Protein_2 IS21 family transposase -
CPZ97_RS25380 () 2321..3158 + 838 Protein_3 IS4 family transposase -
CPZ97_RS25385 () 3207..4403 - 1197 WP_134802188.1 IS110 family transposase -
CPZ97_RS25390 () 4595..5589 - 995 Protein_5 IS21 family transposase -
CPZ97_RS25400 () 5936..6750 + 815 Protein_6 transposase -
CPZ97_RS25405 () 6940..7719 + 780 WP_024263024.1 type III secretion system effector cysteine protease IpaJ -
CPZ97_RS25410 () 8668..9597 - 930 WP_000227976.1 virulence regulon transcriptional activator VirB -
CPZ97_RS25415 () 9804..10040 - 237 WP_000588956.1 acyl carrier protein -
CPZ97_RS25420 () 10044..11945 - 1902 WP_011379000.1 T3SS effector invasin IpaA -
CPZ97_RS25425 () 11954..12952 - 999 WP_001028028.1 type III secretion system needle tip complex protein IpaD -
CPZ97_RS25430 () 13003..14094 - 1092 WP_000405469.1 T3SS translocon subunit IpaC -
CPZ97_RS25435 () 14114..15856 - 1743 WP_000552051.1 type III secretion system translocon subunit IpaB -
CPZ97_RS25440 () 15862..16329 - 468 WP_000055835.1 SycD/LcrH family type III secretion system chaperone IpgC -
CPZ97_RS25445 () 16387..17013 - 627 WP_001166524.1 type III secretion effector IpgB1 -
CPZ97_RS25450 () 17029..17418 - 390 WP_010921664.1 type III secretion system chaperone IpgA -
CPZ97_RS25455 () 17431..18915 - 1485 WP_000601046.1 type III secretion system effector IcsB -
CPZ97_RS25465 () 19229..20845 + 1617 WP_000548332.1 type III secretion system effector inositol phosphate phosphatase -
CPZ97_RS25470 () 20855..21217 + 363 WP_000389733.1 type III secretion system chaperone IpgE -
CPZ97_RS25475 () 21217..21675 + 459 WP_000086107.1 type III secretion system lytic transglycosylase IpgF -
CPZ97_RS25480 () 21684..22799 + 1116 WP_134802189.1 type III secretion system protein MxiG -
CPZ97_RS25485 () 22807..23058 + 252 WP_011378999.1 type III secretion system needle complex protein -
CPZ97_RS25490 () 23071..23364 + 294 WP_001106824.1 type III secretion system inner rod protein MxiI -
CPZ97_RS25495 () 23370..24095 + 726 WP_000621939.1 SctJ family type III secretion inner membrane ring lipoprotein Mxi -
CPZ97_RS25500 () 24092..24619 + 528 WP_000620626.1 type III secretion apparatus protein OrgA/MxiK -
CPZ97_RS25505 () 24561..25256 + 696 WP_011378997.1 Mxi-Spa type III secretion system linker protein MxiN -
CPZ97_RS25510 () 25249..25656 + 408 WP_000609864.1 type III secretion system protein MxiM -
CPZ97_RS25515 () 25640..26068 + 429 WP_011378996.1 type III secretion system pilotin MxiM -
CPZ97_RS25520 () 26198..26830 + 633 WP_000398257.1 type III secretion system transcriptional activator MxiE -
CPZ97_RS25525 () 26817..28517 + 1701 WP_000714402.1 type III secretion system secretin MxiD -
CPZ97_RS25530 () 28536..29603 + 1068 WP_000887827.1 type III secretion system gatekeeper subunit MxiC -
CPZ97_RS25535 () 29616..31676 + 2061 WP_024263027.1 type III secretion system export apparatus protein MxiA -
CPZ97_RS25540 () 31689..32090 + 402 WP_011378994.1 type III secretion system chaperone Spa15/SpaK -
CPZ97_RS25545 () 32094..33386 + 1293 WP_000122614.1 type III secretion system ATPase SpaL -
CPZ97_RS25550 () 33479..33817 + 339 WP_024263028.1 type III secretion system protein Spa13 -
CPZ97_RS25555 () 33804..34682 + 879 WP_001162452.1 type III secretion system needle length regulator Spa32 -
CPZ97_RS25560 () 34676..35557 + 882 WP_000944986.1 SctQ family type III secretion system ring protein Spa33 -
CPZ97_RS25565 () 35562..36212 + 651 WP_000947538.1 type III secretion system export apparatus protein Spa24/SpaP -
CPZ97_RS25570 () 36227..36487 + 261 WP_001280546.1 type III secretion system export apparatus protein SpaQ -
CPZ97_RS25575 () 36487..37257 + 771 WP_000355395.1 type III secretion system export apparatus protein Spa29/SpaR -
CPZ97_RS25580 () 37264..38292 + 1029 WP_001284685.1 type III secretion system export apparatus switch protein Spa40/SpaS -
CPZ97_RS25585 () 38305..38547 + 243 WP_010921676.1 hypothetical protein -
CPZ97_RS25590 () 39154..39995 - 842 Protein_43 IS3 family transposase -
CPZ97_RS25595 () 39992..40571 - 580 Protein_44 IS3 family transposase -
CPZ97_RS27895 () 40634..41038 - 405 WP_038815643.1 hypothetical protein -
CPZ97_RS25610 () 41589..42305 - 717 WP_005059327.1 hypothetical protein -
CPZ97_RS25615 () 42889..43296 - 408 Protein_47 IS110 family transposase -
CPZ97_RS25620 () 43320..43781 - 462 Protein_48 transposase -
CPZ97_RS25625 () 43834..45043 + 1210 Protein_49 IS3 family transposase -
CPZ97_RS25630 () 45070..45219 - 150 Protein_50 transposase -
CPZ97_RS25635 () 45400..45829 - 430 Protein_51 transposase -
CPZ97_RS25640 () 45985..46242 - 258 WP_023592977.1 hypothetical protein -
CPZ97_RS27900 () 46995..47393 - 399 Protein_53 group II intron reverse transcriptase/maturase -
CPZ97_RS25655 () 47396..47762 - 367 Protein_54 IS3 family transposase -
CPZ97_RS25660 () 47764..48448 - 685 Protein_55 IS3 family transposase -
CPZ97_RS25665 () 48626..49828 - 1203 WP_001195011.1 alpha-tubulin-specific protease -
CPZ97_RS27905 () 50837..50983 + 147 WP_171764094.1 hypothetical protein -
CPZ97_RS25675 () 51131..54439 + 3309 WP_001071790.1 outer membrane autotransporter IcsA -
CPZ97_RS25685 () 55957..56148 + 192 WP_134801818.1 fimbria/pilus outer membrane usher protein -
CPZ97_RS25690 () 56072..56650 + 579 Protein_62 IS3 family transposase -
CPZ97_RS25695 () 56689..56829 - 141 Protein_63 IS21 family transposase -
CPZ97_RS25700 () 56825..56980 + 156 Protein_64 IS110 family transposase -
CPZ97_RS25705 () 57052..57312 + 261 WP_000078111.1 replication regulatory protein RepA -
CPZ97_RS25715 () 57547..57621 + 75 WP_001365705.1 RepA leader peptide Tap -
CPZ97_RS25720 () 57614..58471 + 858 WP_000131021.1 incFII family plasmid replication initiator RepA -
CPZ97_RS25725 () 59019..59492 + 474 WP_001217111.1 hypothetical protein -
CPZ97_RS25730 () 59565..59764 + 200 Protein_69 transposase -
CPZ97_RS25735 () 59901..60593 - 693 WP_000625266.1 type III secretion system effector cysteine methyltransferase OspZ -
CPZ97_RS25740 () 60649..60801 + 153 Protein_71 IS3 family transposase -
CPZ97_RS25750 () 62182..63129 + 948 WP_011378982.1 omptin family outer membrane protease IcsP -
CPZ97_RS25760 () 63691..63937 - 247 Protein_73 IS3 family transposase -
CPZ97_RS25770 () 64181..64300 + 120 Protein_74 DUF3440 domain-containing protein -
CPZ97_RS25775 () 64550..65416 + 867 WP_001046940.1 type 3 secretion system effector OspB -
CPZ97_RS25780 () 65745..66485 + 741 WP_000850660.1 PAP2 family phosphatase PhoN2 -
CPZ97_RS27910 () 67567..67752 + 186 WP_134802089.1 hypothetical protein -
CPZ97_RS25800 () 67800..68478 - 679 Protein_79 IS1 family transposase -
CPZ97_RS25810 () 68518..69445 - 928 Protein_80 T3SS effector OspC family protein -
CPZ97_RS27915 () 69387..69542 - 156 WP_171764095.1 hypothetical protein -
CPZ97_RS25820 () 69522..70216 + 695 WP_134801664.1 IS1 family transposase -
CPZ97_RS25825 () 70672..71190 - 519 Protein_83 transposase -
CPZ97_RS25830 () 71207..71892 - 686 Protein_84 IS3 family transposase -
CPZ97_RS25835 () 72303..72458 + 156 WP_119164625.1 helicase -
CPZ97_RS25840 () 72582..74291 - 1710 WP_024263012.1 ShET2/EspL2 family type III secretion system effector toxin -
CPZ97_RS25850 () 76059..76778 - 720 WP_001121864.1 type III secretion system effector phosphothreonine lyase -
CPZ97_RS25855 () 76984..77547 - 564 Protein_89 transposase -
CPZ97_RS25860 () 77543..77789 + 247 Protein_90 IS1 family transposase -
CPZ97_RS25865 () 77898..78476 - 579 WP_000868555.1 hypothetical protein -
CPZ97_RS27920 () 78902..79139 - 238 Protein_92 ATP-binding protein -
CPZ97_RS25875 () 79326..79755 - 430 Protein_93 transposase -
CPZ97_RS26640 () 79833..80120 + 288 WP_001082153.1 hypothetical protein -
CPZ97_RS25890 () 80151..80798 + 648 Protein_95 transposase -
CPZ97_RS25895 () 80798..81145 + 348 WP_000622997.1 IS66 family insertion sequence element accessory protein TnpB -
CPZ97_RS25900 () 81165..82394 + 1230 Protein_97 IS66 family transposase -
CPZ97_RS25905 () 82398..82557 + 160 Protein_98 IS3 family transposase -
CPZ97_RS25910 () 83146..83444 + 299 Protein_99 transposase -
CPZ97_RS25915 () 83526..83663 + 138 Protein_100 IS630 family transposase -
CPZ97_RS25920 () 84035..84712 + 678 WP_011379050.1 type 3 secretion system effector/anti-activator OspD1 -
CPZ97_RS27925 () 85224..85538 + 315 WP_011114726.1 hypothetical protein -
CPZ97_RS25940 () 85820..86386 + 567 WP_024263014.1 type III secretion effector IpgB2 -
CPZ97_RS28100 () 86648..86770 - 123 Protein_104 transposase domain-containing protein -
CPZ97_RS25950 () 86958..88123 + 1166 WP_134801821.1 IS3-like element IS3H family transposase -
CPZ97_RS25955 () 88463..88824 + 362 Protein_106 IS1 family transposase -
CPZ97_RS25965 () 88911..89921 + 1011 Protein_107 IS21 family transposase -
CPZ97_RS25970 () 89918..90700 + 783 WP_075335727.1 IS21-like element IS100kyp family helper ATPase IstB -
CPZ97_RS25975 () 90767..91105 + 339 Protein_109 IS1 family transposase -
CPZ97_RS25985 () 91427..92626 + 1200 WP_000200286.1 AAA family ATPase -
CPZ97_RS25990 () 92626..93606 + 981 WP_000431558.1 ParB/RepB/Spo0J family partition protein -
CPZ97_RS25995 () 93862..94344 + 483 Protein_112 IS110 family transposase -
CPZ97_RS26000 () 94374..94553 - 180 Protein_113 transposase domain-containing protein -
CPZ97_RS26005 () 94636..95868 - 1233 WP_023592848.1 group II intron reverse transcriptase/maturase -
CPZ97_RS26015 () 96339..96518 - 180 Protein_115 transposase -
CPZ97_RS26020 () 96543..97764 - 1222 Protein_116 IS3 family transposase -
CPZ97_RS26025 () 97816..99540 - 1725 WP_011379044.1 T3SS effector E3 ubiquitin-protein ligase IpaH4.5 -
CPZ97_RS26030 () 99968..101665 - 1698 WP_134801822.1 T3SS effector E3 ubiquitin-protein ligase IpaH7.8 -
CPZ97_RS26035 () 101995..102174 + 180 Protein_119 transposase -
CPZ97_RS26040 () 102191..102440 - 250 Protein_120 IS1 family transposase -
CPZ97_RS26045 () 102485..103379 - 895 Protein_121 IS3 family transposase -
CPZ97_RS26050 () 103395..104091 - 697 Protein_122 IS1 family transposase -
CPZ97_RS26060 () 104404..105248 + 845 WP_094096542.1 IS5 family transposase -
CPZ97_RS26065 () 105387..105542 + 156 Protein_124 IS256 family transposase -
CPZ97_RS26070 () 105572..107299 - 1728 WP_024263018.1 IpaH family type III secretion system E3 ubiquitin--protein ligase -
CPZ97_RS26075 () 107687..107953 - 267 WP_000957712.1 type 3 secretion system effector OspE2 -
CPZ97_RS28105 () 108099..108242 - 144 Protein_127 IS1 family transposase -
CPZ97_RS27930 () 108600..108752 - 153 WP_011114782.1 hypothetical protein -
CPZ97_RS26085 () 108791..109227 + 437 Protein_129 transposase -
CPZ97_RS27935 () 109916..110128 + 213 WP_134801807.1 hypothetical protein -
CPZ97_RS26100 () 110131..111340 - 1210 Protein_132 IS3 family transposase -
CPZ97_RS26105 () 111387..111944 - 558 Protein_133 IS110 family transposase -
CPZ97_RS26115 () 112955..114367 + 1413 WP_011379035.1 type 3 secretion system effector OspC1 -
CPZ97_RS26120 () 114466..114600 - 135 Protein_135 IS1 family transposase -
CPZ97_RS26125 () 114676..116373 + 1698 WP_005015229.1 type III secretion system effector OspD3 -
CPZ97_RS26135 () 117336..118042 + 707 Protein_138 IS256 family transposase -
CPZ97_RS26140 () 118021..118362 + 342 Protein_139 hypothetical protein -
CPZ97_RS26145 () 118403..118570 + 168 Protein_140 transposase -
CPZ97_RS26150 () 118625..119834 + 1210 Protein_141 IS3 family transposase -
CPZ97_RS26155 () 120175..121827 + 1653 WP_000612524.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA -
CPZ97_RS26160 () 121892..122586 + 695 WP_134801671.1 IS1 family transposase -
CPZ97_RS26165 () 123001..123750 + 750 WP_000828660.1 phosphatase PAP2 family protein -
CPZ97_RS26170 () 123920..124764 - 845 Protein_145 IS5 family transposase -
CPZ97_RS26175 () 125189..126643 + 1455 WP_000701102.1 type 3 secretion system effector OspC2 -
CPZ97_RS26190 () 127682..128062 - 381 WP_005015412.1 type II toxin-antitoxin system RelB/DinJ family antitoxin -
CPZ97_RS26195 () 128242..128637 - 396 WP_000445931.1 plasmid partitioning/stability family protein -
CPZ97_RS26200 () 128637..129596 - 960 WP_000921950.1 plasmid segregation protein ParM -
CPZ97_RS26210 () 130035..130358 + 324 Protein_151 DUF1281 domain-containing protein -
CPZ97_RS28110 () 130359..130434 + 76 Protein_152 aspartate oxidase -
CPZ97_RS26215 () 130403..131167 - 765 Protein_153 IS3-like element IS600 family transposase -
CPZ97_RS26220 () 131183..131880 - 698 Protein_154 IS1 family transposase -
CPZ97_RS26225 () 131936..132336 - 401 Protein_155 transposase -
CPZ97_RS27940 () 132401..132541 - 141 Protein_156 IS3 family transposase -
CPZ97_RS26230 () 132596..133129 - 534 Protein_157 transposase -
CPZ97_RS27945 () 133244..133882 - 639 WP_000607008.1 type III secretion system effector OspI -
CPZ97_RS26240 () 134041..134510 - 470 Protein_159 IS1 family transposase -
CPZ97_RS26250 () 134846..135031 + 186 Protein_160 ATP-binding protein -
CPZ97_RS26255 () 135131..135340 - 210 Protein_161 peptidoglycan-binding protein -
CPZ97_RS26270 () 136092..136376 + 285 WP_001178088.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
CPZ97_RS26275 () 136376..136651 + 276 WP_000421263.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
CPZ97_RS27950 () 136783..136920 - 138 WP_000766699.1 hypothetical protein -
CPZ97_RS26280 () 137012..137377 - 366 WP_000361390.1 plasmid partitioning/stability family protein -
CPZ97_RS26285 () 137380..137948 - 569 Protein_166 plasmid segregation protein ParM -
CPZ97_RS26290 () 137956..139046 + 1091 Protein_167 IS66 family transposase -
CPZ97_RS26295 () 139422..140115 - 694 Protein_168 IS1 family transposase -
CPZ97_RS26300 () 140355..140573 + 219 WP_000813626.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
CPZ97_RS26305 () 140575..140880 + 306 WP_001159860.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
CPZ97_RS26310 () 140904..141011 + 108 WP_023592908.1 transposase domain-containing protein -
CPZ97_RS26315 () 141139..141833 + 695 WP_087786203.1 IS1-like element IS1N family transposase -
CPZ97_RS26320 () 142047..143684 + 1638 WP_000936810.1 T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -
CPZ97_RS26325 () 143892..144161 + 270 WP_000079957.1 hypothetical protein -
CPZ97_RS28115 () 144158..144384 + 227 Protein_175 type II toxin-antitoxin system RelE/ParE family toxin -
CPZ97_RS26335 () 144413..145003 + 591 WP_000705601.1 type III secretion system effector protein kinase OspG -
CPZ97_RS26345 () 145688..147034 + 1347 Protein_177 IS4-like element IS4 family transposase -
CPZ97_RS27955 () 147048..147239 - 192 Protein_178 IS66 family insertion sequence element accessory protein TnpB -
CPZ97_RS26355 () 147237..147561 + 325 Protein_179 IS3 family transposase -
CPZ97_RS26360 () 147591..150503 - 2913 WP_023636847.1 ankyrin repeat protein -
CPZ97_RS26365 () 150506..150622 + 117 WP_004996477.1 hypothetical protein -
CPZ97_RS26370 () 150986..151828 + 843 WP_000931198.1 polysaccharide deacetylase family protein -
CPZ97_RS26375 () 151831..152919 + 1089 WP_005015483.1 putative hexosyltransferase CapU -
CPZ97_RS26380 () 152924..153874 + 951 WP_004970430.1 virulence factor VirK -
CPZ97_RS26385 () 153939..154883 + 945 WP_004996485.1 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase -
CPZ97_RS26390 () 155081..155596 + 516 Protein_186 transposase -
CPZ97_RS28120 () 155594..155725 + 132 Protein_187 transposase -
CPZ97_RS26395 () 155870..156292 - 423 Protein_188 hypothetical protein -
CPZ97_RS26400 () 156465..157223 + 759 Protein_189 IS4 family transposase -
CPZ97_RS26410 () 158486..160268 + 1783 Protein_191 type IV conjugative transfer system coupling protein TraD -
CPZ97_RS26415 () 160277..160675 - 399 WP_000911312.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
CPZ97_RS26420 () 160675..160902 - 228 WP_000450529.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
CPZ97_RS26425 () 160987..161403 + 417 WP_171547753.1 conjugative relaxase -
CPZ97_RS26430 () 161390..166246 + 4857 WP_005015506.1 conjugative transfer relaxase/helicase TraI -
CPZ97_RS26435 () 166266..167012 + 747 WP_000205723.1 conjugal transfer pilus acetylase TraX -
CPZ97_RS26440 () 167067..167627 + 561 WP_000139365.1 fertility inhibition protein FinO -
CPZ97_RS26445 () 167758..167970 + 213 WP_004971339.1 ANR family transcriptional regulator -
CPZ97_RS26455 () 168214..168375 + 162 Protein_199 endonuclease -
CPZ97_RS26460 () 168391..169087 - 697 Protein_200 IS1 family transposase -
CPZ97_RS26465 () 169134..169451 + 318 Protein_201 thermonuclease family protein -
CPZ97_RS26470 () 169497..169705 + 209 Protein_202 hemolysin expression modulator Hha -
CPZ97_RS26480 () 170596..171108 + 513 Protein_204 DUF2726 domain-containing protein -
CPZ97_RS26485 () 171348..171608 + 261 WP_000083819.1 replication regulatory protein RepA -
CPZ97_RS26495 () 171832..171906 + 75 WP_001365705.1 RepA leader peptide Tap -
CPZ97_RS26500 () 171899..172756 + 858 WP_000130974.1 incFII family plasmid replication initiator RepA -
CPZ97_RS26505 () 173866..175074 - 1209 WP_000198558.1 IS91 family transposase -
CPZ97_RS26510 () 175055..175327 - 273 WP_000019161.1 hypothetical protein -
CPZ97_RS28125 () 175402..176199 + 798 Protein_210 T3SS effector E3 ubiquitin-protein ligase IpaH7.8 -
CPZ97_RS28130 () 176182..176865 + 684 Protein_211 IS3 family transposase -
CPZ97_RS26520 () 176908..177180 - 273 Protein_212 IS3 family transposase -
CPZ97_RS27365 () 177869..178006 + 138 WP_158231502.1 hypothetical protein -
CPZ97_RS26530 () 177948..178205 - 258 Protein_215 transposase -
CPZ97_RS26535 () 178273..178755 - 483 WP_000405248.1 GNAT family N-acetyltransferase Toxin Detail
CPZ97_RS26540 () 178746..179048 - 303 WP_162147618.1 DUF1778 domain-containing protein Antitoxin Detail
CPZ97_RS26545 () 179462..180196 - 735 Protein_218 IS21-like element IS100kyp family helper ATPase IstB -
CPZ97_RS26550 () 180329..181471 - 1143 Protein_219 IS91 family transposase -
CPZ97_RS26555 () 181452..181724 - 273 WP_000019161.1 hypothetical protein -
CPZ97_RS26565 () 181807..182331 - 525 Protein_221 transposase -
CPZ97_RS26570 () 182468..182641 - 174 WP_011379008.1 transposase -
CPZ97_RS26575 () 182983..184437 + 1455 WP_011379007.1 type 3 secretion system effector OspC4 -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance