MGE detailed information
MGE type: Prophage MGE length: 42419 bp
Accession: NZ_CP024466 Location: 3333423..3375841 Organism: Shigella dysenteriae strain BU53M1 Replicon: chromosome
Accession: NZ_CP024466 Location: 3333423..3375841 Organism: Shigella dysenteriae strain BU53M1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ97_RS18400 () | 3328616..3329203 | + | 588 | WP_000285785.1 | 4'-phosphopantetheinyl transferase AcpT | - |
| CPZ97_RS18405 () | 3329314..3330888 | + | 1575 | WP_000953378.1 | nickel ABC transporter substrate-binding protein | - |
| CPZ97_RS18410 () | 3330888..3331832 | + | 945 | WP_000947084.1 | nickel ABC transporter permease subunit NikB | - |
| CPZ97_RS18415 () | 3331829..3332662 | + | 834 | WP_001008803.1 | nickel ABC transporter permease subunit NikC | - |
| CPZ97_RS18420 () | 3332662..3333426 | + | 765 | WP_001136199.1 | nickel import ATP-binding protein NikD | - |
| CPZ97_RS18425 () | 3333423..3334229 | + | 807 | WP_000173685.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CPZ97_RS18430 () | 3334235..3334636 | + | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| CPZ97_RS18435 () | 3334835..3335068 | + | 234 | Protein_3492 | GntR family transcriptional regulator | - |
| CPZ97_RS18440 () | 3335126..3335820 | + | 695 | WP_134801618.1 | IS1 family transposase IS1N | Transposase |
| CPZ97_RS18445 () | 3335834..3336301 | + | 468 | Protein_3494 | GntR family transcriptional regulator | - |
| CPZ97_RS18455 () | 3336950..3337129 | + | 180 | WP_134801851.1 | hypothetical protein | - |
| CPZ97_RS18460 () | 3337154..3337627 | + | 474 | WP_001161552.1 | PTS sugar transporter subunit IIA | - |
| CPZ97_RS18465 () | 3337624..3337905 | + | 282 | WP_000084022.1 | PTS sugar transporter subunit IIB | - |
| CPZ97_RS18470 () | 3337982..3338350 | + | 369 | Protein_3499 | PTS galactitol transporter subunit IIC | - |
| CPZ97_RS18475 () | 3338340..3338417 | - | 78 | Protein_3500 | IS1 family transposase | - |
| CPZ97_RS18480 () | 3338474..3339171 | + | 698 | Protein_3501 | IS1 family transposase | - |
| CPZ97_RS18485 () | 3339181..3339786 | + | 606 | WP_051394730.1 | hypothetical protein | - |
| CPZ97_RS18490 () | 3339983..3340677 | + | 695 | WP_087786203.1 | IS1 family transposase IS1N | Transposase |
| CPZ97_RS18495 () | 3340677..3341285 | + | 609 | WP_134802125.1 | hypothetical protein | - |
| CPZ97_RS18500 () | 3341340..3341953 | + | 614 | Protein_3505 | hypothetical protein | - |
| CPZ97_RS18505 () | 3342147..3343652 | - | 1506 | WP_000448119.1 | glycerol-3-phosphate dehydrogenase | - |
| CPZ97_RS18510 () | 3343842..3344168 | + | 327 | WP_000371932.1 | thiosulfate sulfurtransferase GlpE | - |
| CPZ97_RS18515 () | 3344213..3345043 | + | 831 | WP_000928722.1 | rhomboid family intramembrane serine protease GlpG | - |
| CPZ97_RS18520 () | 3345060..3345818 | + | 759 | WP_000815099.1 | DeoR/GlpR family transcriptional regulator | - |
| CPZ97_RS18525 () | 3345800..3346309 | - | 510 | Protein_3510 | DNA-binding transcriptional regulator RtcR | - |
| CPZ97_RS18530 () | 3346309..3346809 | + | 501 | Protein_3511 | RNA-splicing ligase RtcB | - |
| CPZ97_RS18535 () | 3346813..3347841 | + | 1029 | WP_024259430.1 | RNA 3'-terminal phosphate cyclase | - |
| CPZ97_RS18540 () | 3347891..3348376 | - | 486 | WP_000513068.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CPZ97_RS18545 () | 3348367..3348645 | - | 279 | WP_000801913.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CPZ97_RS18550 () | 3348712..3351411 | - | 2700 | WP_134802126.1 | HTH-type transcriptional regulator MalT | VF |
| CPZ97_RS18555 () | 3352023..3354416 | + | 2394 | WP_000081869.1 | maltodextrin phosphorylase | - |
| CPZ97_RS18560 () | 3354426..3356510 | + | 2085 | WP_000444321.1 | 4-alpha-glucanotransferase | - |
| CPZ97_RS18565 () | 3356555..3357871 | - | 1317 | WP_001131760.1 | gluconate transporter | - |
| CPZ97_RS18570 () | 3358232..3358807 | - | 576 | WP_000619389.1 | Fe-S biogenesis protein NfuA | - |
| CPZ97_RS18575 () | 3358866..3359535 | - | 670 | Protein_3520 | DNA utilization protein GntX | - |
| CPZ97_RS18580 () | 3359573..3360343 | + | 771 | WP_001060094.1 | pimeloyl-ACP methyl ester esterase BioH | - |
| CPZ97_RS18585 () | 3360370..3361248 | - | 879 | WP_000039052.1 | hypothetical protein | VF |
| CPZ97_RS18590 () | 3361451..3361687 | - | 237 | WP_000157586.1 | [Fe-S]-dependent transcriptional repressor FeoC | - |
| CPZ97_RS18595 () | 3361687..3364008 | - | 2322 | WP_000737013.1 | GTPase Der | VF |
| CPZ97_RS18600 () | 3364025..3364252 | - | 228 | WP_001200455.1 | hypothetical protein | VF |
| CPZ97_RS18605 () | 3364709..3367030 | - | 2322 | WP_000980741.1 | RNA-binding transcriptional accessory protein | - |
| CPZ97_RS18610 () | 3367127..3367603 | - | 477 | WP_000856744.1 | transcription elongation factor GreB | - |
| CPZ97_RS18615 () | 3367831..3368550 | + | 720 | WP_001157751.1 | Regulator of RpoS | VF |
| CPZ97_RS18620 () | 3368547..3369899 | + | 1353 | WP_001253696.1 | Adaptive-response sensory-kinase SasA | VF |
| CPZ97_RS18625 () | 3369975..3371597 | - | 1623 | WP_001265675.1 | phosphoenolpyruvate carboxykinase (ATP) | - |
| CPZ97_RS18630 () | 3371977..3373701 | + | 1725 | WP_000370792.1 | DUF4153 domain-containing protein | - |
| CPZ97_RS18635 () | 3373771..3374464 | - | 694 | Protein_3532 | IS1 family transposase | - |
| CPZ97_RS18640 () | 3374537..3375415 | - | 879 | WP_001135574.1 | Hsp33 family molecular chaperone HslO | - |
| CPZ97_RS18645 () | 3375440..3375841 | - | 402 | WP_000660483.1 | ribosome-associated heat shock protein Hsp15 | - |
| CPZ97_RS18650 () | 3375852..3376520 | - | 669 | WP_001295168.1 | GMP/IMP nucleotidase | - |
| CPZ97_RS18655 () | 3376585..3378720 | - | 2136 | WP_000104529.1 | intracellular growth attenuator protein IgaA | - |
| CPZ97_RS18660 () | 3379040..3379600 | + | 561 | WP_000045740.1 | ADP compounds hydrolase NudE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|