MGE detailed information
MGE type: Genomic_island MGE length: 11675 bp
Accession: NZ_CP024289 Location: 4540254..4551928 Organism: Escherichia coli O178:H19 strain 2012C-4431 Replicon: chromosome
Accession: NZ_CP024289 Location: 4540254..4551928 Organism: Escherichia coli O178:H19 strain 2012C-4431 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5960_RS23650 () | 4535255..4535689 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| A5960_RS23655 () | 4535707..4536585 | - | 879 | WP_001355782.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| A5960_RS23660 () | 4536575..4537354 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| A5960_RS23665 () | 4537365..4537838 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| A5960_RS23670 () | 4537861..4539141 | - | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| A5960_RS23680 () | 4539390..4540199 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| A5960_RS23685 () | 4540254..4540718 | - | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| A5960_RS23690 () | 4540718..4541053 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| A5960_RS23695 () | 4541202..4542773 | - | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| A5960_RS23700 () | 4543148..4544482 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| A5960_RS23705 () | 4544498..4545268 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| A5960_RS23710 () | 4545298..4546188 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| A5960_RS23715 () | 4546285..4547430 | + | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| A5960_RS23725 () | 4548453..4549640 | - | 1188 | WP_000484573.1 | YhaC family protein | - |
| A5960_RS23730 () | 4549662..4550201 | - | 540 | WP_000675752.1 | hypothetical protein | - |
| A5960_RS28715 () | 4550457..4550675 | - | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| A5960_RS23740 () | 4550990..4551928 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| A5960_RS23750 () | 4552027..4553016 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| A5960_RS23755 () | 4553038..4554369 | + | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| A5960_RS23760 () | 4554395..4555603 | + | 1209 | WP_001352528.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|