MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 147766 bp
Accession: NZ_CP024272 Location: 1..147766 Organism: Escherichia coli strain F8111-1SC3 Replicon: plasmid unnamed3
Accession: NZ_CP024272 Location: 1..147766 Organism: Escherichia coli strain F8111-1SC3 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCV27_RS25755 () | 264..782 | + | 519 | WP_001595081.1 | hypothetical protein | VF |
| CCV27_RS25760 () | 792..3191 | + | 2400 | WP_023486680.1 | Outer membrane usher protein YraJ | VF |
| CCV27_RS25765 () | 3235..3918 | + | 684 | WP_050437387.1 | Chaperone protein FaeE | VF |
| CCV27_RS25770 () | 3960..4463 | + | 504 | WP_001595078.1 | hypothetical protein | VF |
| CCV27_RS25775 () | 4608..5375 | + | 768 | WP_024171421.1 | hypothetical protein | VF |
| CCV27_RS25780 () | 5392..6156 | + | 765 | WP_001595075.1 | hypothetical protein | VF |
| CCV27_RS25785 () | 6167..6910 | + | 744 | WP_001595074.1 | hypothetical protein | - |
| CCV27_RS25790 () | 7048..7347 | + | 300 | WP_032201317.1 | Major pilu subunit operon regulatory protein PapB | VF |
| CCV27_RS25795 () | 7496..8326 | + | 831 | WP_001595073.1 | K88 fimbrial protein AC | VF |
| CCV27_RS25800 () | 8346..9218 | + | 873 | WP_001595072.1 | K88 fimbrial protein AB | VF |
| CCV27_RS25805 () | 9510..9953 | - | 444 | Protein_11 | IS1 family transposase IS1N | Transposase |
| CCV27_RS25810 () | 9999..10283 | - | 285 | Protein_12 | IS3 family transposase ISEcB1 | Transposase |
| CCV27_RS25815 () | 10332..10537 | - | 206 | Protein_13 | tyrosine-type recombinase/integrase | - |
| CCV27_RS25820 () | 10632..11045 | - | 414 | WP_001595064.1 | hypothetical protein | - |
| CCV27_RS25825 () | 11522..11779 | + | 258 | WP_001595062.1 | hypothetical protein | - |
| CCV27_RS25830 () | 11779..12321 | + | 543 | WP_032201505.1 | hypothetical protein | - |
| CCV27_RS25840 () | 12564..13406 | + | 843 | WP_160371899.1 | polysaccharide deacetylase family protein | - |
| CCV27_RS25845 () | 13409..14497 | + | 1089 | WP_024171602.1 | putative hexosyltransferase CapU | - |
| CCV27_RS25850 () | 14502..15452 | + | 951 | WP_023486370.1 | virulence factor VirK | - |
| CCV27_RS25855 () | 15549..15974 | + | 426 | WP_000436083.1 | IS66 family transposase IS682 | Transposase |
| CCV27_RS25860 () | 15971..16321 | + | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| CCV27_RS25865 () | 16352..17965 | + | 1614 | WP_099492829.1 | IS66 family transposase ISEc23 | Transposase |
| CCV27_RS25870 () | 17996..18307 | + | 312 | Protein_23 | IS21 family transposase IS100kyp | Transposase |
| CCV27_RS25875 () | 18304..19086 | + | 783 | Protein_24 | IS21 family transposase IS100kyp | Transposase |
| CCV27_RS25885 () | 19151..19978 | + | 828 | Protein_25 | IS66 family transposase ISEc8 | Transposase |
| CCV27_RS25890 () | 20051..21260 | + | 1210 | Protein_26 | IS256 family transposase IS1414 | Transposase |
| CCV27_RS27090 () | 21296..21397 | + | 102 | Protein_27 | transposase domain-containing protein | - |
| CCV27_RS25895 () | 21436..22295 | + | 860 | Protein_28 | IS91 family transposase ISSbo1 | Transposase |
| CCV27_RS25900 () | 22485..22697 | + | 213 | Protein_29 | helix-turn-helix domain-containing protein | - |
| CCV27_RS25905 () | 22702..22941 | + | 240 | Protein_30 | IS21 family transposase | - |
| CCV27_RS25910 () | 22958..23713 | + | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| CCV27_RS25920 () | 23806..23958 | + | 153 | Protein_32 | IS3 family transposase | - |
| CCV27_RS25925 () | 24004..24123 | + | 120 | Protein_33 | IS200/IS605 family transposase | - |
| CCV27_RS25930 () | 24516..24704 | + | 189 | WP_001595165.1 | hypothetical protein | - |
| CCV27_RS25935 () | 24852..26063 | + | 1212 | WP_001717882.1 | biotin/lipoyl-binding protein | - |
| CCV27_RS25940 () | 26060..28156 | + | 2097 | WP_001717881.1 | ATP-binding cassette domain-containing protein | - |
| CCV27_RS27095 () | 28490..29050 | + | 561 | WP_157757764.1 | hypothetical protein | - |
| CCV27_RS25950 () | 29246..30454 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| CCV27_RS25955 () | 30528..30947 | + | 420 | WP_001595160.1 | IS66 family transposase ISEc23 | Transposase |
| CCV27_RS25960 () | 30944..31294 | + | 351 | WP_001464094.1 | IS66 family transposase IS682 | Transposase |
| CCV27_RS25965 () | 31325..32293 | + | 969 | Protein_41 | IS66 family transposase ISEc47 | Transposase |
| CCV27_RS25970 () | 32325..32759 | + | 435 | WP_001595158.1 | DUF1380 family protein | - |
| CCV27_RS25975 () | 32804..33367 | + | 564 | Protein_43 | hypothetical protein | - |
| CCV27_RS25980 () | 33398..35011 | - | 1614 | WP_099492829.1 | IS66 family transposase ISEc23 | Transposase |
| CCV27_RS25985 () | 35042..35392 | - | 351 | WP_001404526.1 | IS66 family transposase ISEc47 | Transposase |
| CCV27_RS25990 () | 35389..35814 | - | 426 | WP_000436083.1 | IS66 family transposase IS682 | Transposase |
| CCV27_RS25995 () | 35910..36086 | + | 177 | Protein_47 | antirestriction protein | - |
| CCV27_RS27330 () | 36073..36305 | - | 233 | Protein_48 | hypothetical protein | - |
| CCV27_RS26010 () | 36985..37215 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| CCV27_RS26015 () | 37267..38628 | + | 1362 | WP_032201446.1 | DUF3560 domain-containing protein | - |
| CCV27_RS26020 () | 38675..39238 | + | 564 | WP_032201448.1 | class I SAM-dependent methyltransferase | - |
| CCV27_RS26040 () | 40091..40612 | + | 522 | WP_032201449.1 | single-stranded DNA-binding protein | - |
| CCV27_RS26045 () | 40669..40902 | + | 234 | WP_001297827.1 | DUF905 domain-containing protein | - |
| CCV27_RS26050 () | 40963..42930 | + | 1968 | WP_032201451.1 | ParB/RepB/Spo0J family partition protein | - |
| CCV27_RS26055 () | 42985..43419 | + | 435 | WP_001719370.1 | conjugation system SOS inhibitor PsiB | - |
| CCV27_RS26060 () | 43416..44090 | + | 675 | WP_001719371.1 | plasmid SOS inhibition protein A | - |
| CCV27_RS26065 () | 44087..44401 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 44358..44504 | + | 147 | NuclAT_0 | - | - |
| - () | 44358..44504 | + | 147 | NuclAT_0 | - | - |
| - () | 44358..44504 | + | 147 | NuclAT_0 | - | - |
| - () | 44358..44504 | + | 147 | NuclAT_0 | - | - |
| CCV27_RS26070 () | 44603..45095 | - | 493 | Protein_58 | IS3 family transposase IS1203 | Transposase |
| CCV27_RS26075 () | 45303..46548 | + | 1246 | Protein_59 | acyltransferase | - |
| CCV27_RS27335 () | 46918..47067 | + | 150 | WP_001424616.1 | hypothetical protein | - |
| CCV27_RS26080 () | 47263..47402 | - | 140 | Protein_61 | IS91 family transposase IS91 | Transposase |
| CCV27_RS26085 () | 47452..48093 | - | 642 | WP_001719375.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CCV27_RS26090 () | 48345..48542 | + | 198 | Protein_63 | IS3 family transposase IS2 | Transposase |
| CCV27_RS26095 () | 48631..48861 | + | 231 | WP_099490941.1 | transposase | - |
| CCV27_RS26100 () | 48773..49438 | + | 666 | Protein_65 | IS66 family transposase ISEc43 | Transposase |
| CCV27_RS27340 () | 49580..50945 | - | 1366 | Protein_66 | IS66 family transposase ISCro1 | Transposase |
| CCV27_RS26110 () | 50947..51845 | - | 899 | Protein_67 | IS3 family transposase ISEc48 | Transposase |
| CCV27_RS26120 () | 52119..52475 | - | 357 | WP_071600075.1 | Protein CexE | VF |
| CCV27_RS26135 () | 52969..53265 | + | 297 | WP_001717536.1 | hypothetical protein | - |
| CCV27_RS26140 () | 53265..53833 | + | 569 | Protein_70 | IS91 family transposase IS91 | Transposase |
| CCV27_RS26145 () | 54018..54780 | + | 763 | Protein_71 | IS21 family transposase ISSso4 | Transposase |
| CCV27_RS26150 () | 54810..56402 | - | 1593 | WP_099490891.1 | IS66 family transposase ISEc23 | Transposase |
| CCV27_RS26155 () | 56433..56783 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| CCV27_RS26160 () | 56780..57205 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| CCV27_RS26165 () | 57403..58413 | - | 1011 | Protein_75 | IS66 family transposase ISEc43 | Transposase |
| CCV27_RS26170 () | 58468..59577 | + | 1110 | Protein_76 | IS4 family transposase | - |
| CCV27_RS26175 () | 59748..60361 | - | 614 | Protein_77 | IS66 family transposase ISEc47 | Transposase |
| CCV27_RS26180 () | 60392..60742 | - | 351 | WP_024171399.1 | IS66 family transposase ISEc47 | Transposase |
| CCV27_RS26185 () | 60739..61173 | - | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| CCV27_RS26190 () | 61188..61643 | - | 456 | WP_157757766.1 | IS3 family transposase ISEcB1 | Transposase |
| CCV27_RS26195 () | 61703..62205 | - | 503 | Protein_81 | IS3 family transposase ISBope1 | Transposase |
| CCV27_RS26200 () | 62329..62478 | - | 150 | Protein_82 | IS3 family transposase ISKpn37 | Transposase |
| CCV27_RS26205 () | 62986..63204 | + | 219 | WP_001595189.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| CCV27_RS26215 () | 63455..64663 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| CCV27_RS26220 () | 64836..65252 | + | 417 | Protein_85 | IS66 family transposase ISCro1 | Transposase |
| CCV27_RS26230 () | 65362..65658 | - | 297 | Protein_86 | IS21 family transposase | - |
| CCV27_RS26235 () | 65744..66169 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| CCV27_RS26240 () | 66166..66516 | + | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| CCV27_RS26245 () | 66547..68139 | + | 1593 | WP_099490891.1 | IS66 family transposase ISEc23 | Transposase |
| CCV27_RS27345 () | 68387..68542 | - | 156 | WP_000074142.1 | hypothetical protein | - |
| CCV27_RS26255 () | 68623..69774 | - | 1152 | WP_001702847.1 | IS30 family transposase IS30D | Transposase |
| CCV27_RS26260 () | 69839..70099 | - | 261 | Protein_92 | IS3 family transposase ISSfl10 | Transposase |
| CCV27_RS26265 () | 70161..72998 | + | 2838 | Protein_93 | Multifunctional conjugation protein TraI | Relaxase |
| CCV27_RS26270 () | 73016..73562 | + | 547 | Protein_94 | DUF2726 domain-containing protein | - |
| CCV27_RS26275 () | 73559..74290 | + | 732 | WP_001717613.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| CCV27_RS26280 () | 74514..74696 | - | 183 | WP_001393357.1 | hypothetical protein | - |
| - () | 74940..74996 | - | 57 | NuclAT_1 | - | - |
| - () | 74940..74996 | - | 57 | NuclAT_1 | - | - |
| - () | 74940..74996 | - | 57 | NuclAT_1 | - | - |
| - () | 74940..74996 | - | 57 | NuclAT_1 | - | - |
| CCV27_RS26290 () | 74988..75194 | + | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | - |
| CCV27_RS26295 () | 75478..75738 | + | 261 | WP_000083817.1 | replication regulatory protein RepA | - |
| CCV27_RS26305 () | 75964..76038 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CCV27_RS26310 () | 76031..76888 | + | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| CCV27_RS26325 () | 77750..78151 | - | 402 | Protein_101 | IS91 family transposase | - |
| CCV27_RS26330 () | 78152..78798 | + | 647 | Protein_102 | IS630 family transposase | - |
| CCV27_RS26335 () | 79357..80487 | + | 1131 | WP_001718764.1 | ABC transporter permease | - |
| CCV27_RS26340 () | 80484..81686 | + | 1203 | WP_001595205.1 | TolC family protein | - |
| CCV27_RS26345 () | 81643..82416 | + | 774 | WP_050437394.1 | hypothetical protein | - |
| CCV27_RS26350 () | 82409..83035 | + | 627 | WP_001595210.1 | ABC transporter ATP-binding protein | - |
| CCV27_RS26355 () | 83216..84304 | + | 1089 | Protein_107 | IS3 family transposase | - |
| CCV27_RS26360 () | 84602..85789 | - | 1188 | WP_024191434.1 | peptide antibiotic transporter SbmA | - |
| CCV27_RS27115 () | 86200..86412 | - | 213 | WP_148717951.1 | hypothetical protein | - |
| CCV27_RS27120 () | 86405..86569 | + | 165 | Protein_110 | IS91 family transposase | - |
| CCV27_RS26370 () | 86578..89625 | - | 3048 | WP_001717496.1 | Tn3 family transposase ISPsy42 | Transposase |
| CCV27_RS26375 () | 89775..90353 | + | 579 | WP_001400936.1 | Tn3 family transposase ISPsy39 | Transposase |
| CCV27_RS26380 () | 90346..90618 | + | 273 | WP_000566440.1 | hypothetical protein | - |
| CCV27_RS26385 () | 90661..91376 | + | 716 | Protein_114 | IS91 family transposase ISEc37 | Transposase |
| CCV27_RS27125 () | 91744..91917 | + | 174 | WP_001717498.1 | hypothetical protein | - |
| CCV27_RS26395 () | 92136..92360 | + | 225 | Protein_116 | IS66 family transposase ISEc43 | Transposase |
| CCV27_RS26400 () | 92515..92979 | + | 465 | WP_024171410.1 | CS6 fimbrial subunit A | VF |
| CCV27_RS26405 () | 92997..93500 | + | 504 | WP_001595140.1 | CS6 fimbrial subunit CssB | - |
| CCV27_RS26410 () | 93549..94247 | + | 699 | WP_001595139.1 | Chaperone protein caf1M | VF |
| CCV27_RS26415 () | 94204..96639 | + | 2436 | WP_157757767.1 | CS6 fimbrial usher CssD | - |
| CCV27_RS26420 () | 96653..97215 | - | 563 | Protein_121 | IS1 family transposase | - |
| CCV27_RS26425 () | 97404..98581 | - | 1178 | Protein_122 | IS91 family transposase ISEc37 | Transposase |
| CCV27_RS26430 () | 98581..98877 | - | 297 | WP_000766063.1 | hypothetical protein | - |
| CCV27_RS26440 () | 99091..102060 | - | 2970 | WP_099492834.1 | Tn3 family transposase TnpA_TnShfr1 | Transposase |
| CCV27_RS26445 () | 102063..102623 | - | 561 | WP_001595151.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| CCV27_RS26450 () | 102903..103025 | - | 123 | Protein_126 | IS1 family transposase IS1N | Transposase |
| CCV27_RS26455 () | 103295..103965 | + | 671 | Protein_127 | AAA family ATPase | - |
| CCV27_RS26460 () | 104019..104648 | + | 630 | WP_001717585.1 | hypothetical protein | - |
| CCV27_RS26465 () | 104778..106298 | + | 1521 | Protein_129 | DUF4158 domain-containing protein | - |
| CCV27_RS26470 () | 106294..106530 | + | 237 | Protein_130 | IS91 family transposase ISEc37 | Transposase |
| CCV27_RS26475 () | 106898..107695 | - | 798 | WP_001595134.1 | CFA/I fimbrial subunit D | VF |
| CCV27_RS26480 () | 107893..108090 | + | 198 | WP_001413878.1 | ANR family transcriptional regulator | - |
| CCV27_RS26485 () | 108405..108572 | - | 168 | Protein_133 | IS91 family transposase ISEc37 | Transposase |
| CCV27_RS26490 () | 108604..108879 | - | 276 | Protein_134 | incFII family plasmid replication initiator RepA | - |
| CCV27_RS26495 () | 109148..110260 | - | 1113 | WP_099490844.1 | IS4 family transposase IS421 | Transposase |
| CCV27_RS26500 () | 110304..110714 | - | 411 | Protein_136 | IS3 family transposase ISSfl10 | Transposase |
| CCV27_RS26505 () | 110799..111188 | + | 390 | WP_164997363.1 | IS66 family transposase ISEc8 | Transposase |
| CCV27_RS26510 () | 111185..111532 | + | 348 | WP_001595131.1 | IS66 family transposase ISEc8 | Transposase |
| CCV27_RS26515 () | 111582..111989 | + | 408 | Protein_139 | ISL3 family transposase ISEc38 | Transposase |
| CCV27_RS26520 () | 111994..112947 | - | 954 | Protein_140 | ISL3 family transposase ISEc38 | Transposase |
| CCV27_RS26525 () | 113250..113672 | + | 423 | WP_001595126.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CCV27_RS26530 () | 113672..114946 | + | 1275 | WP_001595125.1 | Y-family DNA polymerase | - |
| CCV27_RS27350 () | 114985..115308 | - | 324 | WP_000143877.1 | hypothetical protein | - |
| CCV27_RS26540 () | 115305..115718 | - | 414 | WP_032159708.1 | hypothetical protein | - |
| CCV27_RS26545 () | 115742..116773 | - | 1032 | WP_001595123.1 | ParB/RepB/Spo0J family partition protein | - |
| CCV27_RS26550 () | 116773..117639 | - | 867 | WP_001595122.1 | AAA family ATPase | - |
| CCV27_RS26555 () | 118193..118444 | + | 252 | WP_001595120.1 | hypothetical protein | Antitoxin Detail |
| CCV27_RS26560 () | 118441..118767 | + | 327 | WP_001595119.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CCV27_RS26565 () | 118871..119167 | + | 297 | WP_000766063.1 | hypothetical protein | - |
| CCV27_RS26570 () | 119167..120344 | + | 1178 | Protein_150 | IS91 family transposase ISEc37 | Transposase |
| CCV27_RS26585 () | 121217..122194 | + | 978 | WP_023486339.1 | RepB family plasmid replication initiator protein | - |
| CCV27_RS26590 () | 122552..124073 | - | 1522 | Protein_152 | IS3 family transposase | - |
| CCV27_RS26595 () | 124163..124903 | - | 741 | WP_001717448.1 | IS91 family transposase ISMno23 | Transposase |
| CCV27_RS26600 () | 125024..125152 | - | 129 | Protein_154 | transcriptional regulator | - |
| CCV27_RS26605 () | 125641..125940 | + | 300 | WP_024171395.1 | Major pilu subunit operon regulatory protein PapB | VF |
| CCV27_RS26610 () | 126215..127057 | + | 843 | WP_001595107.1 | helix-turn-helix domain-containing protein | - |
| CCV27_RS26615 () | 127065..127508 | + | 444 | WP_001595106.1 | hypothetical protein | VF |
| CCV27_RS26620 () | 127812..128522 | + | 711 | WP_149007421.1 | Toxin coregulated pilin | VF |
| CCV27_RS26625 () | 128583..130151 | + | 1569 | WP_024171394.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CCV27_RS26630 () | 130170..130589 | + | 420 | WP_024171393.1 | hypothetical protein | VF |
| CCV27_RS26635 () | 130606..132062 | + | 1457 | Protein_161 | type II and III secretion system protein | - |
| CCV27_RS26640 () | 132065..132625 | + | 561 | WP_001595100.1 | hypothetical protein | - |
| CCV27_RS26645 () | 132627..133454 | + | 828 | WP_001595099.1 | hypothetical protein | - |
| CCV27_RS26650 () | 133442..133930 | + | 489 | WP_001595098.1 | hypothetical protein | - |
| CCV27_RS26655 () | 134128..135459 | + | 1332 | WP_024171392.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CCV27_RS26660 () | 135446..136471 | + | 1026 | WP_001595096.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CCV27_RS26665 () | 136486..137550 | + | 1065 | WP_001595094.1 | hypothetical protein | - |
| CCV27_RS26670 () | 137556..138380 | + | 825 | WP_001595093.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| CCV27_RS26675 () | 138739..138960 | - | 222 | Protein_169 | IS91 family transposase ISEc37 | Transposase |
| CCV27_RS26680 () | 138954..139319 | - | 366 | Protein_170 | transposase | - |
| CCV27_RS26685 () | 139540..140106 | - | 567 | WP_024171396.1 | hypothetical protein | - |
| CCV27_RS26695 () | 140836..141048 | - | 213 | WP_001717486.1 | hypothetical protein | - |
| CCV27_RS26700 () | 141165..141341 | + | 177 | Protein_173 | IS21 family transposase IS21 | Transposase |
| CCV27_RS26705 () | 141402..141719 | + | 318 | Protein_174 | ISL3 family transposase ISEc38 | Transposase |
| CCV27_RS26715 () | 143376..144897 | + | 1522 | Protein_175 | IS3 family transposase | - |
| CCV27_RS26720 () | 144929..146080 | - | 1152 | WP_001702847.1 | IS30 family transposase IS30D | Transposase |
| CCV27_RS26725 () | 146234..146599 | + | 366 | Protein_177 | IS1 family transposase IS1N | Transposase |
| CCV27_RS27130 () | 147078..147179 | - | 102 | Protein_178 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|