MGE detailed information
MGE type: Genomic_island MGE length: 11455 bp
Accession: NZ_CP024240 Location: 2466547..2478001 Organism: Escherichia coli O114:H49 strain 90-9280 Replicon: chromosome
Accession: NZ_CP024240 Location: 2466547..2478001 Organism: Escherichia coli O114:H49 strain 90-9280 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COG33_RS13110 () | 2462872..2464080 | - | 1209 | WP_001356028.1 | propionate kinase | - |
| COG33_RS13115 () | 2464106..2465437 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| COG33_RS13120 () | 2465459..2466448 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| COG33_RS13130 () | 2466547..2467485 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| COG33_RS27680 () | 2467800..2468018 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| COG33_RS13140 () | 2468274..2468813 | + | 540 | WP_000675746.1 | hypothetical protein | - |
| COG33_RS13145 () | 2468835..2470022 | + | 1188 | WP_000484573.1 | YhaC family protein | - |
| COG33_RS13155 () | 2470826..2471971 | - | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| COG33_RS13160 () | 2472068..2472958 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| COG33_RS13165 () | 2472988..2473758 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| COG33_RS13170 () | 2473774..2475108 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| COG33_RS13175 () | 2475483..2477053 | + | 1571 | Protein_2438 | galactarate dehydratase | - |
| COG33_RS13180 () | 2477202..2477537 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| COG33_RS13185 () | 2477537..2478001 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| COG33_RS13190 () | 2478056..2478865 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| COG33_RS13200 () | 2479114..2480394 | + | 1281 | WP_000681933.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| COG33_RS13205 () | 2480417..2480890 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| COG33_RS13210 () | 2480901..2481680 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| COG33_RS13215 () | 2481670..2482548 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| COG33_RS13220 () | 2482566..2483000 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|