MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 64143 bp
Accession: NZ_CP024033 Location: 1..64143 Organism: Xanthomonas citri pv. citri strain Xcc29-1 Replicon: plasmid pXAC64
Accession: NZ_CP024033 Location: 1..64143 Organism: Xanthomonas citri pv. citri strain Xcc29-1 Replicon: plasmid pXAC64
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COR42_RS23350 () | 321..737 | - | 417 | WP_087962480.1 | transposase | - |
| COR42_RS24325 () | 791..997 | - | 207 | WP_011052961.1 | hypothetical protein | - |
| COR42_RS23355 () | 1047..1376 | - | 330 | WP_005918642.1 | hypothetical protein | - |
| COR42_RS23360 () | 1523..2122 | + | 600 | WP_015462601.1 | hypothetical protein | - |
| COR42_RS23365 () | 2451..2900 | + | 450 | WP_058958627.1 | hypothetical protein | - |
| COR42_RS23370 () | 2897..3502 | + | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| COR42_RS23375 () | 3499..4043 | + | 545 | Protein_7 | hypothetical protein | - |
| COR42_RS23380 () | 4123..4470 | - | 348 | WP_121509191.1 | hypothetical protein | - |
| COR42_RS23385 () | 4514..5791 | - | 1278 | WP_011052115.1 | lytic murein transglycosylase | - |
| COR42_RS23390 () | 5924..8914 | - | 2991 | WP_047930116.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| COR42_RS23395 () | 8922..10196 | - | 1275 | WP_011052968.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| COR42_RS23400 () | 10389..11444 | + | 1056 | WP_121509192.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| COR42_RS23405 () | 11578..12654 | + | 1077 | WP_121509198.1 | avirulence protein | - |
| COR42_RS23420 () | 14009..17602 | + | 3594 | WP_121509193.1 | TAL effector repeat-containing protein | - |
| COR42_RS23425 () | 17968..19188 | - | 1221 | WP_011052942.1 | replication initiation protein | - |
| COR42_RS23430 () | 19436..19750 | - | 315 | WP_005918227.1 | hypothetical protein | - |
| COR42_RS23435 () | 19895..20218 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| COR42_RS23440 () | 20215..20841 | - | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| COR42_RS23445 () | 21297..21605 | + | 309 | WP_015462607.1 | hypothetical protein | - |
| COR42_RS23450 () | 21602..21811 | + | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| COR42_RS23455 () | 22206..22559 | - | 354 | WP_015462609.1 | hypothetical protein | - |
| COR42_RS23460 () | 22608..23315 | - | 708 | WP_121509189.1 | plasmid stabilization protein | - |
| COR42_RS23465 () | 23312..23758 | - | 447 | WP_011052937.1 | hypothetical protein | - |
| COR42_RS23470 () | 24106..24501 | + | 396 | WP_015462611.1 | hypothetical protein | - |
| COR42_RS24330 () | 24501..24674 | + | 174 | WP_011052974.1 | hypothetical protein | - |
| COR42_RS23475 () | 24816..25088 | - | 273 | WP_005934628.1 | hypothetical protein | - |
| COR42_RS23485 () | 25379..25729 | + | 351 | WP_121509194.1 | hypothetical protein | - |
| COR42_RS24420 () | 25928..26269 | + | 342 | WP_205589465.1 | hypothetical protein | - |
| COR42_RS23495 () | 26528..28102 | + | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| COR42_RS23500 () | 28116..31091 | + | 2976 | WP_011052978.1 | Multifunctional conjugation protein TraI | Relaxase |
| COR42_RS23505 () | 31145..31471 | - | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| COR42_RS23510 () | 31468..31686 | - | 219 | WP_003491150.1 | antitoxin MazE family protein | Antitoxin Detail |
| COR42_RS23515 () | 31823..32209 | - | 387 | WP_003491149.1 | hypothetical protein | - |
| COR42_RS23520 () | 32286..32705 | - | 420 | WP_011052981.1 | hypothetical protein | - |
| COR42_RS23525 () | 32831..33709 | - | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| COR42_RS23530 () | 33720..34742 | - | 1023 | WP_011052983.1 | Type IV secretion system protein VirB11 | VF |
| COR42_RS23535 () | 34753..35973 | - | 1221 | WP_011052984.1 | Type IV secretion system protein virB10 | VF |
| COR42_RS23540 () | 35975..36757 | - | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| COR42_RS23545 () | 36782..37456 | - | 675 | WP_011052986.1 | type IV secretion system protein | - |
| COR42_RS23550 () | 37453..38319 | - | 867 | WP_011052987.1 | type IV secretion system protein | - |
| COR42_RS23555 () | 38321..38701 | - | 381 | WP_015462616.1 | hypothetical protein | - |
| COR42_RS23560 () | 38694..38906 | - | 213 | WP_015462617.1 | hypothetical protein | - |
| COR42_RS23565 () | 38954..39622 | - | 669 | WP_015462618.1 | VirB5 protein | - |
| COR42_RS23570 () | 39619..42252 | - | 2634 | WP_011052991.1 | Type IV secretion system protein virB4 | VF |
| COR42_RS23575 () | 42275..42574 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| COR42_RS23580 () | 42571..42948 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| COR42_RS23585 () | 42969..43229 | - | 261 | WP_121509200.1 | MobD protein | - |
| COR42_RS23605 () | 44441..44677 | - | 237 | WP_015462622.1 | Wgr family protein | - |
| COR42_RS23610 () | 44681..45010 | - | 330 | WP_011052996.1 | partition gene repressor | - |
| COR42_RS23615 () | 45062..46093 | - | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| COR42_RS23620 () | 46107..46874 | - | 768 | WP_011052998.1 | ParA family protein | - |
| COR42_RS23625 () | 47680..48906 | - | 1227 | WP_015472949.1 | plasmid replication initiator protein | - |
| COR42_RS23630 () | 49186..50373 | - | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| COR42_RS23635 () | 50380..50643 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| COR42_RS23640 () | 50668..51069 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| COR42_RS23645 () | 51066..51326 | - | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| COR42_RS23655 () | 51518..52093 | + | 576 | WP_121509196.1 | Tn3 family transposase ISPsy42 | Transposase |
| COR42_RS23660 () | 52072..52707 | - | 636 | Protein_59 | IS3 family transposase ISXac3 | Transposase |
| COR42_RS24335 () | 53203..53466 | + | 264 | WP_016851366.1 | hypothetical protein | - |
| COR42_RS23675 () | 54216..58319 | + | 4104 | WP_121509197.1 | TAL effector repeat-containing protein | - |
| COR42_RS23680 () | 58410..58565 | - | 156 | Protein_62 | transposase | - |
| COR42_RS23685 () | 58610..59308 | - | 699 | WP_005918428.1 | UPF0149 family protein | - |
| COR42_RS23690 () | 59327..62302 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| COR42_RS23695 () | 62307..62726 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| COR42_RS23700 () | 62726..62965 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| COR42_RS23705 () | 63179..64102 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|