MGE detailed information
MGE type: Genomic_island MGE length: 46792 bp
Accession: NZ_CP023849 Location: 4761365..4808156 Organism: Escherichia coli strain 4/0 Replicon: chromosome
Accession: NZ_CP023849 Location: 4761365..4808156 Organism: Escherichia coli strain 4/0 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRT34_RS23705 () | 4758213..4758932 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| CRT34_RS23710 () | 4758929..4760560 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| CRT34_RS23715 () | 4760741..4760971 | + | 231 | WP_000371715.1 | (4Fe-4S)-binding protein | - |
| CRT34_RS23720 () | 4760983..4761255 | + | 273 | WP_000405645.1 | N-acetyltransferase | - |
| CRT34_RS23725 () | 4761365..4763902 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| CRT34_RS23730 () | 4763935..4764627 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| CRT34_RS23735 () | 4764692..4765216 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| CRT34_RS23740 () | 4765590..4769429 | + | 3840 | WP_001528154.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| CRT34_RS23745 () | 4770327..4771157 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| CRT34_RS23755 () | 4772313..4776242 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| CRT34_RS23760 () | 4776456..4776728 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CRT34_RS23765 () | 4776955..4777251 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CRT34_RS23770 () | 4777279..4777452 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CRT34_RS23775 () | 4777571..4779088 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| CRT34_RS23780 () | 4779325..4780782 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| CRT34_RS23785 () | 4780841..4782988 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| CRT34_RS23790 () | 4783068..4784402 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CRT34_RS23800 () | 4784768..4786306 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CRT34_RS23805 () | 4787110..4788645 | - | 1536 | WP_000492897.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| CRT34_RS23810 () | 4788716..4788877 | - | 162 | Protein_4571 | DUF4942 domain-containing protein | - |
| CRT34_RS23815 () | 4788968..4790467 | + | 1500 | WP_029700729.1 | IS21 family transposase ISEc10 | Transposase |
| CRT34_RS23820 () | 4790464..4791219 | + | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| CRT34_RS23825 () | 4791283..4791978 | - | 696 | Protein_4574 | DUF4942 domain-containing protein | - |
| CRT34_RS23830 () | 4792063..4792260 | - | 198 | WP_000839254.1 | DUF957 domain-containing protein | - |
| CRT34_RS23835 () | 4792272..4792760 | - | 489 | WP_000761714.1 | hypothetical protein | - |
| CRT34_RS23840 () | 4792757..4793134 | - | 378 | WP_001094436.1 | TA system toxin CbtA family protein | Toxin Detail |
| CRT34_RS23845 () | 4793181..4793558 | - | 378 | WP_015953067.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| CRT34_RS23850 () | 4793637..4793858 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| CRT34_RS23855 () | 4793927..4794403 | - | 477 | WP_001186756.1 | RadC family protein | - |
| CRT34_RS23860 () | 4794418..4794903 | - | 486 | WP_000860054.1 | antirestriction protein | - |
| CRT34_RS23865 () | 4794994..4795812 | - | 819 | WP_001175142.1 | DUF945 domain-containing protein | - |
| CRT34_RS23870 () | 4795902..4796135 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| CRT34_RS23875 () | 4796141..4796818 | - | 678 | WP_001097312.1 | hypothetical protein | - |
| CRT34_RS23880 () | 4796966..4797646 | - | 681 | WP_001282927.1 | WYL domain-containing protein | - |
| CRT34_RS23885 () | 4797849..4798733 | - | 885 | WP_000010416.1 | 50S ribosome-binding GTPase | - |
| CRT34_RS23890 () | 4798839..4799789 | + | 951 | WP_000157734.1 | hypothetical protein | - |
| CRT34_RS23895 () | 4799786..4800574 | - | 789 | WP_000816188.1 | hypothetical protein | - |
| CRT34_RS28015 () | 4801930..4802178 | - | 249 | WP_000573217.1 | hypothetical protein | - |
| CRT34_RS23905 () | 4802283..4803014 | + | 732 | WP_029700721.1 | inovirus Gp2 family protein | - |
| CRT34_RS23910 () | 4803342..4804220 | + | 879 | WP_000769117.1 | restriction endonuclease | - |
| CRT34_RS23915 () | 4804276..4804955 | - | 680 | Protein_4592 | transposase | - |
| CRT34_RS23920 () | 4805208..4805324 | + | 117 | Protein_4593 | phosphoporin PhoE | - |
| CRT34_RS23925 () | 4805326..4805459 | + | 134 | Protein_4594 | phosphate-starvation-inducible protein PsiE | - |
| CRT34_RS23930 () | 4805534..4806985 | - | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| CRT34_RS23935 () | 4806978..4808156 | - | 1179 | WP_001534804.1 | pyridoxal phosphate-dependent aminotransferase | - |
| CRT34_RS23940 () | 4808630..4809843 | + | 1214 | WP_162880626.1 | IS3 family transposase | - |
| CRT34_RS23945 () | 4810134..4810712 | + | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| CRT34_RS23950 () | 4810735..4811553 | + | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| CRT34_RS23955 () | 4811553..4812071 | + | 519 | WP_001217008.1 | hypothetical protein | - |
| CRT34_RS23965 () | 4812591..4812869 | + | 279 | WP_000502008.1 | BMC domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|