MGE detailed information
MGE type: Genomic_island MGE length: 66322 bp
Accession: NZ_CP023844 Location: 3373066..3439387 Organism: Escherichia coli strain 4/1-1 Replicon: chromosome
Accession: NZ_CP023844 Location: 3373066..3439387 Organism: Escherichia coli strain 4/1-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRT35_RS27280 () | 3368739..3368882 | - | 144 | WP_011076574.1 | hypothetical protein | - |
| CRT35_RS16890 () | 3369132..3373019 | + | 3888 | WP_001034083.1 | serine protease autotransporter toxin Sat | - |
| CRT35_RS16895 () | 3373291..3373551 | + | 261 | Protein_3242 | IS3 family transposase ISSfl10 | Transposase |
| CRT35_RS16900 () | 3373616..3374767 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| CRT35_RS16905 () | 3374780..3375670 | + | 891 | Protein_3244 | IS3 family transposase ISSd1 | Transposase |
| CRT35_RS16910 () | 3375715..3376137 | + | 423 | Protein_3245 | hypothetical protein | - |
| CRT35_RS16920 () | 3376662..3377087 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| CRT35_RS16925 () | 3377084..3377434 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| CRT35_RS16930 () | 3377465..3379078 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| CRT35_RS16935 () | 3379114..3380625 | + | 1512 | Protein_3249 | IS3 family transposase | - |
| CRT35_RS16940 () | 3380659..3381168 | - | 510 | Protein_3250 | L-lactate permease | - |
| CRT35_RS16945 () | 3381188..3381510 | + | 323 | Protein_3251 | IS110 family transposase | - |
| CRT35_RS16955 () | 3382088..3382303 | - | 216 | WP_000266542.1 | hypothetical protein | - |
| CRT35_RS16960 () | 3382307..3382666 | - | 360 | WP_001296382.1 | hypothetical protein | - |
| CRT35_RS16970 () | 3382957..3383199 | - | 243 | WP_001296383.1 | hypothetical protein | - |
| CRT35_RS16975 () | 3383684..3383843 | + | 160 | Protein_3255 | transposase domain-containing protein | - |
| CRT35_RS16980 () | 3384061..3386151 | - | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| CRT35_RS17000 () | 3388031..3389017 | - | 987 | WP_000274668.1 | hypothetical protein | - |
| CRT35_RS17005 () | 3389117..3389851 | + | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| CRT35_RS17010 () | 3389887..3390822 | - | 936 | WP_001305022.1 | alpha/beta hydrolase | - |
| CRT35_RS17015 () | 3390872..3391981 | - | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| CRT35_RS17020 () | 3391994..3392704 | - | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| CRT35_RS17025 () | 3392750..3393580 | - | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| CRT35_RS17030 () | 3393584..3395056 | - | 1473 | WP_000376547.1 | MFS transporter | - |
| CRT35_RS17035 () | 3395105..3395980 | - | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| CRT35_RS17040 () | 3396014..3396931 | - | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| CRT35_RS17045 () | 3397083..3397220 | + | 138 | WP_085949591.1 | transposase domain-containing protein | - |
| CRT35_RS17055 () | 3397592..3398017 | + | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| CRT35_RS17060 () | 3398014..3398364 | + | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| CRT35_RS17065 () | 3398395..3399492 | + | 1098 | Protein_3270 | IS66 family transposase IS682 | Transposase |
| CRT35_RS17070 () | 3399492..3401030 | + | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| CRT35_RS17075 () | 3401069..3401254 | - | 186 | Protein_3272 | hypothetical protein | - |
| CRT35_RS17080 () | 3401251..3401634 | - | 384 | WP_000271011.1 | hypothetical protein | - |
| CRT35_RS17085 () | 3401801..3402370 | - | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| CRT35_RS17090 () | 3402569..3402766 | + | 198 | WP_001547002.1 | hypothetical protein | - |
| CRT35_RS17100 () | 3403099..3403248 | - | 150 | WP_071528377.1 | hemolysin activation protein | - |
| CRT35_RS17110 () | 3404196..3404402 | + | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| CRT35_RS17115 () | 3404488..3405060 | + | 573 | WP_001296389.1 | hypothetical protein | - |
| CRT35_RS17120 () | 3405181..3406671 | - | 1491 | WP_001305029.1 | DUF3987 domain-containing protein | - |
| CRT35_RS17135 () | 3408003..3408875 | + | 873 | WP_001069668.1 | GTPase family protein | - |
| CRT35_RS17140 () | 3409209..3412331 | + | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| CRT35_RS17145 () | 3412426..3413553 | + | 1128 | Protein_3282 | hypothetical protein | - |
| CRT35_RS17150 () | 3413629..3414084 | + | 456 | WP_000581502.1 | hypothetical protein | - |
| CRT35_RS17155 () | 3414163..3414396 | + | 234 | WP_000902034.1 | DUF905 family protein | - |
| CRT35_RS17165 () | 3414497..3415315 | + | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| CRT35_RS17170 () | 3415370..3415855 | + | 486 | WP_000849565.1 | antirestriction protein | - |
| CRT35_RS17175 () | 3415871..3416347 | + | 477 | WP_001186726.1 | RadC family protein | - |
| CRT35_RS17180 () | 3416410..3416631 | + | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| CRT35_RS17185 () | 3416650..3417294 | + | 645 | WP_000094916.1 | hypothetical protein | - |
| CRT35_RS17190 () | 3417344..3417712 | + | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CRT35_RS17195 () | 3417801..3418178 | + | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| CRT35_RS17200 () | 3418175..3418663 | + | 489 | WP_000761699.1 | hypothetical protein | - |
| CRT35_RS17205 () | 3418680..3418877 | + | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| CRT35_RS17210 () | 3418962..3419807 | + | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| CRT35_RS17215 () | 3419876..3420271 | + | 396 | WP_000208384.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| CRT35_RS17220 () | 3420264..3421197 | + | 934 | Protein_3296 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| CRT35_RS27285 () | 3421629..3421784 | + | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| CRT35_RS17225 () | 3422595..3423578 | + | 984 | WP_001296394.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| CRT35_RS17230 () | 3423650..3424798 | + | 1149 | WP_000905920.1 | hypothetical protein | VF |
| CRT35_RS17235 () | 3424822..3426498 | + | 1677 | WP_001305083.1 | Polysialic acid transport protein KpsD | VF |
| CRT35_RS17240 () | 3426508..3427248 | + | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| CRT35_RS17245 () | 3427245..3429272 | + | 2028 | WP_000579513.1 | hypothetical protein | VF |
| CRT35_RS17250 () | 3429307..3430476 | + | 1170 | WP_001161856.1 | hypothetical protein | VF |
| CRT35_RS17255 () | 3430815..3431993 | - | 1179 | WP_001305084.1 | UDP-glucose 6-dehydrogenase | VF |
| CRT35_RS17260 () | 3432035..3433597 | - | 1563 | WP_001305085.1 | UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD | VF |
| CRT35_RS17265 () | 3433758..3434792 | + | 1035 | Protein_3306 | IS481 family transposase | - |
| CRT35_RS17270 () | 3434889..3436577 | - | 1689 | WP_022645101.1 | hypothetical protein | VF |
| CRT35_RS17275 () | 3437012..3437728 | - | 717 | WP_000634338.1 | hypothetical protein | - |
| CRT35_RS17280 () | 3438179..3438335 | - | 157 | Protein_3309 | transposase | - |
| CRT35_RS17285 () | 3438713..3439387 | - | 675 | WP_000590243.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| CRT35_RS17290 () | 3439384..3440160 | - | 777 | WP_000124287.1 | ABC transporter permease | - |
| CRT35_RS17300 () | 3441218..3441754 | - | 537 | WP_000942771.1 | GspM family type II secretion system protein YghD | - |
| CRT35_RS17305 () | 3441756..3442934 | - | 1179 | WP_000095005.1 | type II secretion system protein GspL | - |
| CRT35_RS17310 () | 3442931..3443908 | - | 978 | WP_000633242.1 | type II secretion system minor pseudopilin GspK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|