MGE detailed information
MGE type: Genomic_island MGE length: 63782 bp
Accession: NZ_CP023826 Location: 3371764..3435545 Organism: Escherichia coli strain 4/4 Replicon: chromosome
Accession: NZ_CP023826 Location: 3371764..3435545 Organism: Escherichia coli strain 4/4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRT43_RS27590 () | 3367437..3367580 | - | 144 | WP_011076574.1 | hypothetical protein | - |
| CRT43_RS16960 () | 3367830..3371717 | + | 3888 | WP_001034083.1 | serine protease autotransporter toxin Sat | - |
| CRT43_RS16965 () | 3371989..3372249 | + | 261 | Protein_3259 | IS3 family transposase ISSfl10 | Transposase |
| CRT43_RS16970 () | 3372314..3373465 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| CRT43_RS16975 () | 3373478..3374368 | + | 891 | Protein_3261 | IS3 family transposase ISSd1 | Transposase |
| CRT43_RS16980 () | 3374413..3374835 | + | 423 | Protein_3262 | hypothetical protein | - |
| CRT43_RS16990 () | 3375251..3376783 | + | 1533 | Protein_3263 | IS3 family transposase | - |
| CRT43_RS16995 () | 3376817..3377326 | - | 510 | Protein_3264 | L-lactate permease | - |
| CRT43_RS17000 () | 3377346..3377668 | + | 323 | Protein_3265 | transposase | - |
| CRT43_RS17010 () | 3378246..3378461 | - | 216 | WP_000266542.1 | hypothetical protein | - |
| CRT43_RS17015 () | 3378465..3378824 | - | 360 | WP_001296382.1 | hypothetical protein | - |
| CRT43_RS17025 () | 3379115..3379357 | - | 243 | WP_001296383.1 | hypothetical protein | - |
| CRT43_RS17030 () | 3379842..3380001 | + | 160 | Protein_3269 | transposase domain-containing protein | - |
| CRT43_RS17035 () | 3380219..3382309 | - | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| CRT43_RS17055 () | 3384189..3385175 | - | 987 | WP_000274668.1 | hypothetical protein | - |
| CRT43_RS17060 () | 3385275..3386009 | + | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| CRT43_RS17065 () | 3386045..3386980 | - | 936 | WP_001305022.1 | alpha/beta hydrolase | - |
| CRT43_RS17070 () | 3387030..3388139 | - | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| CRT43_RS17075 () | 3388152..3388862 | - | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| CRT43_RS17080 () | 3388908..3389738 | - | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| CRT43_RS17085 () | 3389742..3391214 | - | 1473 | WP_000376547.1 | MFS transporter | - |
| CRT43_RS17090 () | 3391263..3392138 | - | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| CRT43_RS17095 () | 3392172..3393089 | - | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| CRT43_RS17100 () | 3393241..3393378 | + | 138 | WP_085949591.1 | transposase domain-containing protein | - |
| CRT43_RS17110 () | 3393750..3394175 | + | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| CRT43_RS17115 () | 3394172..3394522 | + | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| CRT43_RS17120 () | 3394553..3395650 | + | 1098 | Protein_3284 | IS66 family transposase IS682 | Transposase |
| CRT43_RS17125 () | 3395650..3397188 | + | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| CRT43_RS17130 () | 3397227..3397412 | - | 186 | Protein_3286 | zinc-ribbon domain-containing protein | - |
| CRT43_RS17135 () | 3397409..3397792 | - | 384 | WP_000271011.1 | hypothetical protein | - |
| CRT43_RS17140 () | 3397959..3398528 | - | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| CRT43_RS17145 () | 3398727..3398924 | + | 198 | WP_001547002.1 | hypothetical protein | - |
| CRT43_RS17155 () | 3399257..3399406 | - | 150 | WP_071528377.1 | hemolysin activation protein | - |
| CRT43_RS17165 () | 3400354..3400560 | + | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| CRT43_RS17170 () | 3400646..3401218 | + | 573 | WP_001296389.1 | hypothetical protein | - |
| CRT43_RS17175 () | 3401339..3402829 | - | 1491 | WP_001305029.1 | DUF3987 domain-containing protein | - |
| CRT43_RS17190 () | 3404161..3405033 | + | 873 | WP_001069668.1 | GTPase family protein | - |
| CRT43_RS17195 () | 3405367..3408489 | + | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| CRT43_RS17200 () | 3408584..3409711 | + | 1128 | Protein_3296 | hypothetical protein | - |
| CRT43_RS17205 () | 3409787..3410242 | + | 456 | WP_000581502.1 | hypothetical protein | - |
| CRT43_RS17210 () | 3410321..3410554 | + | 234 | WP_000902034.1 | DUF905 family protein | - |
| CRT43_RS17220 () | 3410655..3411473 | + | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| CRT43_RS17225 () | 3411528..3412013 | + | 486 | WP_000849565.1 | antirestriction protein | - |
| CRT43_RS17230 () | 3412029..3412505 | + | 477 | WP_001186726.1 | RadC family protein | - |
| CRT43_RS17235 () | 3412568..3412789 | + | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| CRT43_RS17240 () | 3412808..3413452 | + | 645 | WP_000094916.1 | hypothetical protein | - |
| CRT43_RS17245 () | 3413502..3413870 | + | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CRT43_RS17250 () | 3413959..3414336 | + | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| CRT43_RS17255 () | 3414333..3414821 | + | 489 | WP_000761699.1 | hypothetical protein | - |
| CRT43_RS17260 () | 3414838..3415035 | + | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| CRT43_RS17265 () | 3415120..3415965 | + | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| CRT43_RS17270 () | 3416034..3416429 | + | 396 | WP_000208384.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| CRT43_RS17275 () | 3416422..3417355 | + | 934 | Protein_3310 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| CRT43_RS27595 () | 3417787..3417942 | + | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| CRT43_RS17280 () | 3418753..3419736 | + | 984 | WP_001296394.1 | Inosine-5'-monophosphate dehydrogenase | VF |
| CRT43_RS17285 () | 3419808..3420956 | + | 1149 | WP_000905920.1 | hypothetical protein | VF |
| CRT43_RS17290 () | 3420980..3422656 | + | 1677 | WP_001305083.1 | hypothetical protein | VF |
| CRT43_RS17295 () | 3422666..3423406 | + | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| CRT43_RS17300 () | 3423403..3425430 | + | 2028 | WP_000579513.1 | hypothetical protein | VF |
| CRT43_RS17305 () | 3425465..3426634 | + | 1170 | WP_001161856.1 | hypothetical protein | VF |
| CRT43_RS17310 () | 3426973..3428151 | - | 1179 | WP_001305084.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| CRT43_RS17315 () | 3428193..3429755 | - | 1563 | WP_001305085.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| CRT43_RS17320 () | 3429916..3430950 | + | 1035 | Protein_3320 | IS481 family transposase | - |
| CRT43_RS17325 () | 3431047..3432735 | - | 1689 | WP_022645101.1 | hypothetical protein | VF |
| CRT43_RS17330 () | 3433170..3433886 | - | 717 | WP_000634338.1 | hypothetical protein | - |
| CRT43_RS17335 () | 3434337..3434493 | - | 157 | Protein_3323 | transposase | - |
| CRT43_RS17340 () | 3434871..3435545 | - | 675 | WP_000590243.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CRT43_RS17345 () | 3435542..3436318 | - | 777 | WP_000124287.1 | ABC transporter permease | - |
| CRT43_RS17355 () | 3437376..3437912 | - | 537 | WP_000942771.1 | GspM family type II secretion system protein YghD | - |
| CRT43_RS17360 () | 3437914..3439092 | - | 1179 | WP_000095005.1 | type II secretion system protein GspL | - |
| CRT43_RS17365 () | 3439089..3440066 | - | 978 | WP_000633242.1 | type II secretion system minor pseudopilin GspK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|