MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81404 bp
Accession: NZ_CP023707 Location: 1..81404 Organism: Edwardsiella tarda strain KC-Pc-HB1 Replicon: plasmid pEh-Pc1
Accession: NZ_CP023707 Location: 1..81404 Organism: Edwardsiella tarda strain KC-Pc-HB1 Replicon: plasmid pEh-Pc1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPU03_RS16865 () | 545..964 | - | 420 | WP_097364734.1 | tyrosine-type recombinase/integrase | - |
| CPU03_RS16870 () | 943..1566 | - | 624 | WP_157757882.1 | DUF2913 family protein | - |
| CPU03_RS17495 () | 1736..1954 | - | 219 | WP_157757883.1 | hypothetical protein | - |
| CPU03_RS16875 () | 1945..2274 | - | 330 | Protein_3 | transposase | - |
| CPU03_RS16880 () | 2334..3086 | + | 753 | Protein_4 | caspase family protein | - |
| CPU03_RS16885 () | 3226..3507 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| CPU03_RS16890 () | 3488..3817 | - | 330 | WP_004178133.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CPU03_RS16895 () | 4449..5204 | - | 756 | WP_097364736.1 | IS21-like element ISEc10 family helper ATPase IstB | - |
| CPU03_RS17500 () | 5201..5371 | - | 171 | WP_157757884.1 | hypothetical protein | - |
| CPU03_RS16900 () | 5404..6204 | - | 801 | WP_097364737.1 | site-specific integrase | - |
| CPU03_RS16905 () | 6201..6824 | - | 624 | WP_157757885.1 | DUF2913 family protein | - |
| CPU03_RS16910 () | 6934..7875 | - | 942 | WP_097364739.1 | hypothetical protein | - |
| CPU03_RS16915 () | 8410..9366 | + | 957 | WP_097364740.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| CPU03_RS16920 () | 9656..10570 | + | 915 | WP_097364741.1 | Abi family protein | - |
| CPU03_RS16925 () | 10930..11925 | + | 996 | WP_097364742.1 | nucleotidyltransferase | - |
| CPU03_RS16930 () | 11929..12861 | + | 933 | WP_097364743.1 | hypothetical protein | - |
| CPU03_RS16935 () | 13141..13371 | + | 231 | WP_097364744.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CPU03_RS16940 () | 13374..13790 | + | 417 | WP_097364798.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CPU03_RS16945 () | 13996..14427 | - | 432 | WP_097364745.1 | EAL domain-containing protein | - |
| CPU03_RS16950 () | 14432..15058 | - | 627 | WP_097364746.1 | hypothetical protein | - |
| CPU03_RS16955 () | 15132..15905 | - | 774 | WP_097364747.1 | F4 (K88) fimbria accessory protein FaeJ | - |
| CPU03_RS16960 () | 15922..16686 | - | 765 | WP_097364748.1 | F4 (K88) fimbria minor subunit FaeI | - |
| CPU03_RS16965 () | 16717..17514 | - | 798 | WP_097364749.1 | F4 (K88) fimbria minor subunit FaeH | - |
| CPU03_RS16970 () | 17655..18509 | - | 855 | WP_097364750.1 | fimbrial protein | - |
| CPU03_RS16975 () | 18605..19459 | - | 855 | WP_097364751.1 | fimbrial protein | - |
| CPU03_RS16980 () | 19623..20462 | - | 840 | WP_097364752.1 | fimbrial protein | - |
| CPU03_RS16985 () | 20707..21198 | - | 492 | WP_097364753.1 | F4 (K88) fimbria minor subunit FaeF | - |
| CPU03_RS16990 () | 21233..22009 | - | 777 | WP_097364754.1 | F4 (K88) fimbrial chaperone FaeE | - |
| CPU03_RS16995 () | 22002..24431 | - | 2430 | WP_157757886.1 | F4 (K88) fimbrial usher FaeD | - |
| CPU03_RS17000 () | 24446..24997 | - | 552 | WP_097364756.1 | type 1 fimbrial protein | - |
| CPU03_RS17005 () | 25231..26046 | + | 816 | WP_097364757.1 | helix-turn-helix domain-containing protein | - |
| CPU03_RS17010 () | 26376..26504 | - | 129 | WP_157757887.1 | integrase core domain-containing protein | - |
| CPU03_RS17015 () | 26660..27319 | - | 660 | Protein_32 | recombinase family protein | - |
| CPU03_RS17020 () | 27821..28756 | - | 936 | WP_097364759.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CPU03_RS17025 () | 28960..29202 | - | 243 | WP_097364760.1 | hypothetical protein | - |
| CPU03_RS17035 () | 29442..30461 | - | 1020 | WP_097364761.1 | IS110 family transposase | - |
| CPU03_RS17040 () | 30560..31471 | - | 912 | WP_097364762.1 | hypothetical protein | - |
| CPU03_RS17045 () | 32543..33478 | - | 936 | WP_097364799.1 | Replication protein | - |
| CPU03_RS17050 () | 33615..33689 | - | 75 | WP_074428771.1 | RepA leader peptide Tap | - |
| CPU03_RS17055 () | 34028..34594 | - | 567 | WP_097364800.1 | DUF2726 domain-containing protein | - |
| CPU03_RS17060 () | 34795..35415 | - | 621 | WP_097364763.1 | fertility inhibition protein FinO | - |
| CPU03_RS17065 () | 35430..36155 | - | 726 | WP_097364764.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| CPU03_RS17070 () | 36238..41475 | - | 5238 | WP_097364765.1 | conjugative transfer relaxase/helicase TraI | - |
| CPU03_RS17075 () | 41590..41817 | + | 228 | WP_068872245.1 | antitoxin | Antitoxin Detail |
| CPU03_RS17080 () | 41817..42215 | + | 399 | WP_097364766.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| CPU03_RS17085 () | 42293..44497 | - | 2205 | WP_097364767.1 | type IV conjugative transfer system coupling protein TraD | - |
| CPU03_RS17090 () | 44584..45081 | - | 498 | WP_097364768.1 | conjugal transfer protein TraS | - |
| CPU03_RS17095 () | 45090..47942 | - | 2853 | WP_097364769.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CPU03_RS17100 () | 47942..49309 | - | 1368 | WP_097364770.1 | conjugal transfer protein TraH | - |
| CPU03_RS17105 () | 49306..49845 | - | 540 | WP_035599587.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CPU03_RS17110 () | 49826..50059 | - | 234 | WP_068872072.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CPU03_RS17115 () | 50070..50822 | - | 753 | WP_097364771.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CPU03_RS17120 () | 50853..52628 | - | 1776 | WP_097364801.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CPU03_RS17125 () | 52681..53346 | - | 666 | WP_157757888.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CPU03_RS17130 () | 53357..54367 | - | 1011 | WP_097364772.1 | conjugal transfer pilus assembly protein TraU | - |
| CPU03_RS17135 () | 54364..54999 | - | 636 | WP_097364773.1 | type-F conjugative transfer system protein TraW | - |
| CPU03_RS17140 () | 55001..55372 | - | 372 | WP_068872079.1 | type-F conjugative transfer system protein TrbI | - |
| CPU03_RS17145 () | 55369..58002 | - | 2634 | WP_097364774.1 | type IV secretion system protein TraC | - |
| CPU03_RS17150 () | 58131..58697 | - | 567 | WP_097364775.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CPU03_RS17155 () | 58709..58921 | - | 213 | WP_097364776.1 | hypothetical protein | - |
| CPU03_RS17160 () | 58918..59286 | - | 369 | WP_097364777.1 | hypothetical protein | - |
| CPU03_RS17165 () | 59289..60689 | - | 1401 | WP_068872089.1 | conjugal transfer protein TraB | - |
| CPU03_RS17170 () | 60686..61417 | - | 732 | WP_097364778.1 | type-F conjugative transfer system secretin TraK | - |
| CPU03_RS17175 () | 61404..61970 | - | 567 | WP_068872092.1 | type IV conjugative transfer system protein TraE | - |
| CPU03_RS17180 () | 61988..62293 | - | 306 | WP_035599570.1 | type IV conjugative transfer system protein TraL | - |
| CPU03_RS17185 () | 62309..62656 | - | 348 | WP_035599572.1 | type IV conjugative transfer system pilin TraA | - |
| CPU03_RS17190 () | 62728..62940 | - | 213 | WP_097364779.1 | TraY domain-containing protein | - |
| CPU03_RS17505 () | 63016..63705 | - | 690 | WP_157757889.1 | hypothetical protein | - |
| CPU03_RS17195 () | 63947..64687 | - | 741 | WP_097364803.1 | complement resistance protein TraT | - |
| CPU03_RS17200 () | 64744..65130 | - | 387 | WP_068872098.1 | relaxosome protein TraM | - |
| CPU03_RS17205 () | 65651..66124 | + | 474 | WP_097364780.1 | transglycosylase SLT domain-containing protein | - |
| CPU03_RS17210 () | 66630..67535 | - | 906 | WP_097364781.1 | DUF1738 domain-containing protein | - |
| CPU03_RS17215 () | 68207..68575 | - | 369 | WP_097364782.1 | hypothetical protein | - |
| CPU03_RS17220 () | 69242..69970 | - | 729 | WP_097364783.1 | plasmid SOS inhibition protein A | - |
| CPU03_RS17225 () | 69967..70398 | - | 432 | WP_097364784.1 | conjugation system SOS inhibitor PsiB | - |
| CPU03_RS17230 () | 70443..72407 | - | 1965 | WP_097364785.1 | ParB/RepB/Spo0J family partition protein | - |
| CPU03_RS17235 () | 72472..72714 | - | 243 | WP_097364786.1 | DUF905 domain-containing protein | - |
| CPU03_RS17240 () | 72767..73312 | - | 546 | WP_097364787.1 | single-stranded DNA-binding protein | - |
| CPU03_RS17250 () | 74139..74702 | - | 564 | WP_097364789.1 | class I SAM-dependent methyltransferase | - |
| CPU03_RS17255 () | 74757..76103 | - | 1347 | Protein_79 | DUF3560 domain-containing protein | - |
| CPU03_RS17260 () | 76189..76419 | - | 231 | WP_097364790.1 | hypothetical protein | - |
| CPU03_RS17510 () | 76808..76978 | - | 171 | WP_157757890.1 | hypothetical protein | - |
| CPU03_RS17270 () | 77330..77758 | - | 429 | WP_097364791.1 | antirestriction protein | - |
| CPU03_RS17280 () | 78207..78626 | - | 420 | WP_097364792.1 | DUF1380 domain-containing protein | - |
| CPU03_RS17285 () | 78684..79364 | - | 681 | WP_097364793.1 | DNA methylase | - |
| CPU03_RS17295 () | 79963..80589 | + | 627 | WP_097364795.1 | ParA family plasmid-partitioning AAA ATPase | - |
| CPU03_RS17300 () | 80586..80888 | + | 303 | WP_097364796.1 | hypothetical protein | - |
| CPU03_RS17305 () | 81022..81279 | + | 258 | WP_097364797.1 | cobalamin biosynthesis protein CbiX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|