MGE detailed information
MGE type: Prophage MGE length: 74092 bp
Accession: NZ_CP023612 Location: 3532788..3606879 Organism: Mycobacterium tuberculosis strain LN2978 Replicon: chromosome
Accession: NZ_CP023612 Location: 3532788..3606879 Organism: Mycobacterium tuberculosis strain LN2978 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP468_RS17275 () | 3529183..3529824 | - | 642 | WP_003416573.1 | TetR/AcrR family transcriptional regulator | - |
| CP468_RS17280 () | 3529835..3530983 | - | 1149 | WP_003900647.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| CP468_RS17285 () | 3531053..3531490 | - | 438 | WP_003900648.1 | integral membrane protein | - |
| CP468_RS17290 () | 3531487..3532758 | - | 1272 | WP_003416584.1 | DUF58 domain-containing protein | - |
| CP468_RS17295 () | 3532788..3533750 | - | 963 | WP_003416588.1 | MoxR family ATPase | - |
| CP468_RS17300 () | 3533758..3534240 | - | 483 | WP_003416593.1 | hypothetical protein | - |
| CP468_RS17305 () | 3534237..3535196 | - | 960 | WP_003900649.1 | DUF4129 domain-containing protein | - |
| CP468_RS17310 () | 3535276..3535902 | - | 627 | WP_003416599.1 | TetR/AcrR family transcriptional regulator | - |
| CP468_RS17315 () | 3535947..3537083 | + | 1137 | WP_003900650.1 | phosphotransferase family protein | - |
| CP468_RS17320 () | 3537083..3538207 | + | 1125 | WP_003416605.1 | hypothetical protein | - |
| CP468_RS17325 () | 3538350..3539696 | + | 1347 | WP_003416607.1 | hypothetical protein | VF |
| CP468_RS17330 () | 3539691..3540662 | - | 972 | WP_010924623.1 | alpha/beta hydrolase | - |
| CP468_RS21895 () | 3540833..3541012 | - | 180 | WP_003917749.1 | hypothetical protein | - |
| CP468_RS17340 () | 3541288..3541890 | - | 603 | WP_003416617.1 | TetR/AcrR family transcriptional regulator; helix-turn-helix transcriptional regulator | - |
| CP468_RS17345 () | 3541983..3542690 | + | 708 | WP_003900652.1 | hypothetical protein | VF |
| CP468_RS17350 () | 3542705..3544192 | + | 1488 | WP_003416624.1 | hypothetical protein | VF |
| CP468_RS17355 () | 3544189..3545145 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| CP468_RS17360 () | 3545292..3546152 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP468_RS17365 () | 3546127..3546642 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP468_RS17375 () | 3546882..3547175 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP468_RS17380 () | 3547463..3548752 | + | 1290 | WP_003416640.1 | ATP-binding protein | - |
| CP468_RS17385 () | 3549099..3549533 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP468_RS17390 () | 3549536..3549988 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP468_RS17395 () | 3550219..3550563 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP468_RS17400 () | 3550560..3550889 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP468_RS17405 () | 3551126..3552387 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP468_RS17410 () | 3552609..3553870 | + | 1262 | WP_096868035.1 | IS3 family transposase IS987 | Transposase |
| CP468_RS17415 () | 3554143..3554490 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP468_RS17420 () | 3554487..3555107 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP468_RS17425 () | 3555267..3556532 | - | 1266 | WP_003912135.1 | hypothetical protein | - |
| CP468_RS17430 () | 3556700..3556909 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP468_RS17440 () | 3557156..3558190 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP468_RS17445 () | 3558474..3558698 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP468_RS17460 () | 3559408..3559869 | + | 462 | WP_003416793.1 | LLM class flavin-dependent oxidoreductase | - |
| CP468_RS17465 () | 3560039..3563017 | - | 2979 | WP_003899961.1 | UPF0182 family protein | - |
| CP468_RS17470 () | 3563109..3564131 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP468_RS17475 () | 3564209..3565627 | + | 1419 | WP_003416804.1 | zinc-dependent metalloprotease | - |
| CP468_RS17480 () | 3565666..3566532 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP468_RS17485 () | 3566541..3566714 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP468_RS17490 () | 3566869..3568212 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP468_RS17495 () | 3568246..3568524 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP468_RS17500 () | 3568954..3571056 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP468_RS17505 () | 3571180..3571434 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP468_RS17510 () | 3571447..3572388 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| CP468_RS17515 () | 3572447..3573514 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| CP468_RS17520 () | 3573576..3576881 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| CP468_RS17525 () | 3576878..3580045 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| CP468_RS17530 () | 3580131..3580340 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP468_RS17535 () | 3580371..3581156 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP468_RS17540 () | 3581159..3581464 | + | 306 | WP_003416847.1 | MGMT family protein | - |
| CP468_RS17545 () | 3581471..3582325 | - | 855 | WP_003416850.1 | TIGR02569 family protein | - |
| CP468_RS17550 () | 3582376..3583554 | - | 1179 | WP_003416855.1 | adenylyltransferase/sulfurtransferase MoeZ | - |
| CP468_RS17555 () | 3583645..3584673 | - | 1029 | WP_003899970.1 | DUF3152 domain-containing protein | - |
| CP468_RS17560 () | 3584848..3585534 | + | 687 | WP_003416861.1 | TetR/AcrR family transcriptional regulator | - |
| CP468_RS17565 () | 3585521..3585793 | - | 273 | WP_003416863.1 | DUF3107 domain-containing protein | - |
| CP468_RS17570 () | 3586118..3586678 | + | 561 | WP_070890578.1 | threonine AND proline RICH protein | - |
| CP468_RS17575 () | 3586688..3587383 | - | 696 | WP_003416873.1 | hypothetical protein | - |
| CP468_RS17580 () | 3587642..3589225 | + | 1584 | WP_003416875.1 | DEAD/DEAH box helicase | - |
| CP468_RS17585 () | 3589238..3590461 | + | 1224 | WP_003416876.1 | hypothetical protein | - |
| CP468_RS17590 () | 3590537..3591337 | - | 801 | WP_003901572.1 | hypothetical protein | VF |
| CP468_RS17595 () | 3591491..3592102 | + | 612 | WP_003416878.1 | acid phosphatase | - |
| CP468_RS17600 () | 3592099..3593217 | + | 1119 | WP_003416879.1 | hypothetical protein | VF |
| CP468_RS17605 () | 3593214..3593697 | + | 484 | Protein_3328 | GNAT family N-acetyltransferase | - |
| CP468_RS17610 () | 3593649..3594080 | - | 432 | WP_003416881.1 | hypothetical protein | - |
| CP468_RS17615 () | 3594313..3595278 | + | 966 | WP_003416883.1 | diacylglycerol kinase family lipid kinase | - |
| CP468_RS17620 () | 3595558..3595812 | + | 255 | WP_003416884.1 | transcriptional regulator WhiB1 | - |
| CP468_RS17625 () | 3595874..3597379 | - | 1506 | WP_003416886.1 | histidine kinase N-terminal domain-containing protein | - |
| CP468_RS17630 () | 3597396..3597611 | - | 216 | WP_003416887.1 | biotin/lipoyl-binding carrier protein | - |
| CP468_RS17640 () | 3597896..3598201 | - | 306 | WP_003416891.1 | mycothiol system anti-sigma-R factor | - |
| CP468_RS17645 () | 3598198..3598749 | - | 552 | WP_003899976.1 | hypothetical protein | - |
| CP468_RS17650 () | 3598746..3599396 | - | 651 | WP_003416897.1 | hypothetical protein | VF |
| CP468_RS17655 () | 3599696..3600544 | + | 849 | WP_003416899.1 | NAD(P)-dependent oxidoreductase | - |
| CP468_RS17665 () | 3600646..3600864 | + | 219 | WP_003416902.1 | hypothetical protein | - |
| CP468_RS17670 () | 3600861..3602285 | - | 1425 | WP_070890328.1 | GNAT family N-acetyltransferase | - |
| CP468_RS17675 () | 3602409..3603167 | - | 759 | WP_003416907.1 | SOS response-associated peptidase | - |
| CP468_RS17680 () | 3603222..3604574 | + | 1353 | WP_003416914.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| CP468_RS17685 () | 3604571..3605563 | + | 993 | WP_003416916.1 | ribosome small subunit-dependent GTPase A | - |
| CP468_RS17690 () | 3605596..3606879 | - | 1284 | WP_003416919.1 | NADPH-dependent stearoyl-CoA 9-desaturase | - |
| CP468_RS17695 () | 3606957..3608099 | - | 1143 | WP_003416922.1 | NADPH oxidoreductase | - |
| CP468_RS17700 () | 3608209..3608718 | - | 510 | WP_003416925.1 | hypothetical protein | - |
| CP468_RS17705 () | 3608715..3609581 | - | 867 | WP_009938021.1 | polyphosphate kinase 2 | - |
| CP468_RS21900 () | 3609626..3610228 | - | 603 | WP_003899980.1 | DUF1298 domain-containing protein | - |
| CP468_RS21905 () | 3610219..3611034 | - | 816 | WP_003899981.1 | diacylglycerol O-acyltransferase | - |
| CP468_RS17720 () | 3611235..3611786 | + | 552 | WP_003912151.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|