MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 140078 bp
Accession: NZ_CP023535 Location: 2193263..2333340 Organism: Escherichia coli strain FDAARGOS_403 Replicon: chromosome
Accession: NZ_CP023535 Location: 2193263..2333340 Organism: Escherichia coli strain FDAARGOS_403 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO706_RS12910 () | 2188939..2189919 | + | 981 | WP_001273465.1 | ATP-binding protein | - |
| CO706_RS12915 () | 2189929..2192316 | + | 2388 | WP_000126413.1 | S8 family peptidase | - |
| CO706_RS12920 () | 2192326..2193954 | + | 1629 | WP_000105162.1 | site-specific DNA-methyltransferase | - |
| CO706_RS12925 () | 2193957..2196827 | + | 2871 | WP_000081335.1 | DEAD/DEAH box helicase family protein | - |
| CO706_RS12930 () | 2196916..2197209 | + | 294 | WP_001091149.1 | hypothetical protein | - |
| CO706_RS12935 () | 2197279..2197536 | + | 258 | Protein_2141 | IS3 family transposase | - |
| CO706_RS12940 () | 2197549..2198700 | - | 1152 | WP_001254936.1 | IS30-like element IS30 family transposase | - |
| CO706_RS12945 () | 2198765..2199190 | + | 426 | Protein_2143 | IS3 family transposase | - |
| CO706_RS12955 () | 2199863..2201371 | + | 1509 | WP_001189118.1 | group II intron reverse transcriptase/maturase | - |
| CO706_RS12960 () | 2201461..2201934 | + | 474 | Protein_2145 | DDE-type integrase/transposase/recombinase | - |
| CO706_RS12965 () | 2202099..2206215 | + | 4117 | Protein_2146 | serine protease autotransporter toxin Pic | - |
| CO706_RS12970 () | 2206366..2206608 | - | 243 | Protein_2147 | IS256 family transposase | - |
| CO706_RS12975 () | 2206647..2207099 | - | 453 | Protein_2148 | transposase | - |
| CO706_RS12980 () | 2207187..2207621 | + | 435 | WP_001309734.1 | IS66 family insertion sequence hypothetical protein | - |
| CO706_RS12985 () | 2207618..2207968 | + | 351 | WP_000624688.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CO706_RS12990 () | 2207999..2209612 | + | 1614 | WP_000080172.1 | IS66-like element ISEc43 family transposase | - |
| CO706_RS12995 () | 2209798..2209941 | - | 144 | Protein_2152 | IS3 family transposase | - |
| CO706_RS13000 () | 2209945..2210307 | - | 363 | WP_077577697.1 | IS3 family transposase | - |
| CO706_RS13005 () | 2210347..2211480 | - | 1134 | WP_000555380.1 | IS110 family transposase | - |
| CO706_RS13010 () | 2211541..2211729 | + | 189 | Protein_2155 | IS66 family transposase | - |
| CO706_RS13015 () | 2211759..2211929 | + | 171 | Protein_2156 | ATP-dependent helicase | - |
| CO706_RS13025 () | 2212795..2213949 | - | 1155 | WP_000359994.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| CO706_RS13030 () | 2214083..2214363 | - | 281 | Protein_2158 | transposase | - |
| CO706_RS29825 () | 2214428..2214994 | - | 567 | WP_000587872.1 | hypothetical protein | - |
| CO706_RS13050 () | 2216752..2217225 | - | 474 | Protein_2160 | DDE-type integrase/transposase/recombinase | - |
| CO706_RS13055 () | 2217315..2218823 | - | 1509 | WP_001189118.1 | group II intron reverse transcriptase/maturase | - |
| CO706_RS13065 () | 2219496..2220233 | - | 738 | Protein_2162 | IS3 family transposase | - |
| CO706_RS13070 () | 2220430..2222979 | - | 2550 | WP_000029846.1 | type VI secretion system ATPase TssH | - |
| CO706_RS13075 () | 2222983..2226387 | - | 3405 | WP_000914956.1 | type VI secretion protein | - |
| CO706_RS13080 () | 2226393..2226983 | - | 591 | WP_001028113.1 | DotU family type IV/VI secretion system protein | - |
| CO706_RS13090 () | 2227322..2228734 | - | 1413 | WP_001154665.1 | type VI secretion system baseplate subunit TssK | - |
| CO706_RS13095 () | 2228753..2229304 | - | 552 | WP_000152746.1 | type VI secretion lipoprotein TssJ | - |
| CO706_RS13100 () | 2229312..2230388 | - | 1077 | WP_001033155.1 | type VI secretion system protein TssA | - |
| CO706_RS13105 () | 2230392..2230691 | - | 300 | WP_001390299.1 | PAAR domain-containing protein | - |
| CO706_RS13110 () | 2230701..2231168 | - | 468 | WP_000005080.1 | hypothetical protein | - |
| CO706_RS13115 () | 2231179..2233161 | - | 1983 | WP_000198270.1 | type VI secretion system tip protein VgrG | - |
| CO706_RS13120 () | 2233174..2234106 | - | 933 | WP_001173975.1 | type VI secretion system baseplate subunit TssG | - |
| CO706_RS13125 () | 2234097..2235899 | - | 1803 | WP_001390300.1 | type VI secretion system baseplate subunit TssF | - |
| CO706_RS13130 () | 2235892..2236314 | - | 423 | WP_000555547.1 | hypothetical protein | - |
| CO706_RS13135 () | 2236324..2236830 | - | 507 | WP_000233190.1 | type VI secretion system protein AaiC/Hcp2 | - |
| CO706_RS13140 () | 2236840..2238318 | - | 1479 | WP_000215053.1 | type VI secretion system contractile sheath large subunit | - |
| CO706_RS13145 () | 2238321..2238797 | - | 477 | WP_000072549.1 | type VI secretion system contractile sheath small subunit | - |
| CO706_RS13150 () | 2239193..2240209 | + | 1017 | Protein_2178 | IS630 family transposase | - |
| CO706_RS13155 () | 2240215..2240340 | - | 126 | WP_001420591.1 | hypothetical protein | - |
| CO706_RS13160 () | 2240318..2240704 | - | 387 | WP_014966195.1 | hypothetical protein | - |
| CO706_RS13170 () | 2240914..2241493 | + | 580 | Protein_2181 | transposase family protein | - |
| CO706_RS13175 () | 2241524..2241847 | - | 324 | WP_001387054.1 | hypothetical protein | - |
| CO706_RS13180 () | 2241913..2242557 | - | 645 | WP_001387055.1 | hypothetical protein | - |
| CO706_RS13185 () | 2242578..2242847 | - | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| CO706_RS13190 () | 2242926..2243093 | - | 168 | Protein_2185 | transcriptional regulator | - |
| CO706_RS13195 () | 2243208..2243513 | - | 306 | WP_001420595.1 | hypothetical protein | - |
| CO706_RS13200 () | 2243578..2245323 | - | 1746 | WP_001390303.1 | AAA family ATPase | - |
| CO706_RS13205 () | 2245559..2246803 | - | 1245 | WP_000897032.1 | GIY-YIG nuclease family protein | - |
| CO706_RS13210 () | 2246905..2248266 | - | 1362 | WP_000930193.1 | type VI secretion system contractile sheath large subunit | - |
| CO706_RS13215 () | 2248288..2248785 | - | 498 | WP_000098939.1 | type VI secretion system contractile sheath small subunit | - |
| CO706_RS13220 () | 2249292..2249483 | + | 192 | WP_001287796.1 | DUF4222 domain-containing protein | - |
| CO706_RS13225 () | 2249536..2249769 | - | 234 | WP_000124181.1 | hypothetical protein | - |
| CO706_RS13230 () | 2249865..2250488 | - | 624 | WP_001260266.1 | hypothetical protein | - |
| CO706_RS13235 () | 2250609..2250791 | - | 183 | WP_001216313.1 | hypothetical protein | - |
| CO706_RS13240 () | 2250797..2251216 | - | 420 | WP_001387059.1 | hypothetical protein | - |
| CO706_RS13245 () | 2251206..2251589 | - | 384 | WP_000271022.1 | hypothetical protein | - |
| CO706_RS29830 () | 2251561..2251719 | - | 159 | WP_000493525.1 | hypothetical protein | - |
| CO706_RS13250 () | 2251757..2252326 | - | 570 | WP_000220727.1 | inovirus Gp2 family protein | - |
| CO706_RS29835 () | 2252530..2252703 | + | 174 | WP_001387062.1 | hypothetical protein | - |
| CO706_RS13260 () | 2252943..2253155 | - | 213 | WP_000453331.1 | hemolysin expression modulator Hha | - |
| CO706_RS13265 () | 2253854..2254060 | + | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| CO706_RS13270 () | 2254146..2254718 | + | 573 | WP_001170560.1 | hypothetical protein | - |
| CO706_RS13280 () | 2254927..2255034 | + | 108 | Protein_2203 | IS1 family transposase | - |
| CO706_RS13295 () | 2256213..2257232 | + | 1020 | WP_001388379.1 | hypothetical protein | - |
| CO706_RS13300 () | 2257342..2258214 | + | 873 | WP_001069724.1 | GTPase family protein | - |
| CO706_RS13305 () | 2258548..2261667 | + | 3120 | WP_000820379.1 | autotransporter adhesin Ag43 | - |
| CO706_RS13310 () | 2261788..2264304 | + | 2517 | WP_001387066.1 | membrane protein | - |
| CO706_RS13315 () | 2264380..2264835 | + | 456 | WP_000581502.1 | hypothetical protein | - |
| CO706_RS13320 () | 2264914..2265147 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| CO706_RS13330 () | 2265247..2266065 | + | 819 | WP_001234603.1 | DUF945 domain-containing protein | - |
| CO706_RS13340 () | 2266367..2266840 | + | 474 | WP_000855081.1 | antirestriction protein | - |
| CO706_RS13345 () | 2266856..2267331 | + | 476 | Protein_2212 | RadC family protein | - |
| CO706_RS13350 () | 2267418..2267639 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| CO706_RS13355 () | 2267719..2268096 | + | 378 | WP_001285616.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CO706_RS13360 () | 2268143..2268520 | + | 378 | WP_001094429.1 | TA system toxin CbtA family protein | Toxin Detail |
| CO706_RS29400 () | 2268517..2268714 | + | 198 | Protein_2216 | hypothetical protein | - |
| CO706_RS13365 () | 2268742..2268939 | + | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| CO706_RS13370 () | 2269024..2269866 | + | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| CO706_RS13375 () | 2270147..2270683 | - | 537 | WP_000942795.1 | GspM family type II secretion system protein YghD | - |
| CO706_RS13380 () | 2270685..2271863 | - | 1179 | WP_000094962.1 | type II secretion system protein GspL | - |
| CO706_RS13385 () | 2271860..2272837 | - | 978 | WP_000633238.1 | type II secretion system minor pseudopilin GspK | - |
| CO706_RS13390 () | 2272840..2273439 | - | 600 | WP_001255040.1 | type II secretion system minor pseudopilin GspJ | - |
| CO706_RS13395 () | 2273436..2273807 | - | 372 | WP_000820125.1 | type II secretion system minor pseudopilin GspI | - |
| CO706_RS13400 () | 2273804..2274367 | - | 564 | WP_001115140.1 | type II secretion system minor pseudopilin GspH | - |
| CO706_RS13405 () | 2274371..2274826 | - | 456 | WP_001087296.1 | type II secretion system major pseudopilin GspG | - |
| CO706_RS13410 () | 2274843..2276066 | - | 1224 | WP_001173453.1 | type II secretion system inner membrane protein GspF | - |
| CO706_RS13415 () | 2276066..2277559 | - | 1494 | WP_000249348.1 | type II secretion system ATPase GspE | - |
| CO706_RS13420 () | 2277559..2279619 | - | 2061 | WP_000498829.1 | type II secretion system secretin GspD | - |
| CO706_RS13425 () | 2279649..2280608 | - | 960 | WP_000135063.1 | type II secretion system protein GspC | - |
| CO706_RS13430 () | 2280626..2281036 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| CO706_RS13435 () | 2281102..2281911 | - | 810 | WP_001365924.1 | prepilin peptidase PppA | - |
| CO706_RS13440 () | 2282051..2286616 | - | 4566 | WP_001034494.1 | lipoprotein metalloprotease SslE | - |
| CO706_RS13450 () | 2287102..2288784 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| CO706_RS13455 () | 2289140..2291311 | - | 2172 | WP_000084080.1 | malate synthase G | - |
| CO706_RS13460 () | 2291333..2291737 | - | 405 | WP_000853256.1 | protein GlcG | - |
| CO706_RS13465 () | 2291742..2292965 | - | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| CO706_RS13470 () | 2292976..2294028 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| CO706_RS13475 () | 2294028..2295527 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| CO706_RS13480 () | 2295778..2296542 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| CO706_RS13485 () | 2296549..2297691 | - | 1143 | WP_000388786.1 | DNA-binding protein | - |
| CO706_RS13495 () | 2298062..2299783 | + | 1722 | WP_001390306.1 | fatty acyl-AMP ligase | - |
| CO706_RS13500 () | 2299780..2300694 | + | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| CO706_RS13505 () | 2300726..2300974 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| CO706_RS13510 () | 2300974..2302146 | + | 1173 | WP_000524972.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| CO706_RS13515 () | 2302181..2303260 | - | 1080 | WP_001387073.1 | LPS export ABC transporter permease LptG | - |
| CO706_RS13520 () | 2303257..2304327 | - | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| CO706_RS13525 () | 2304358..2304918 | - | 561 | WP_001299422.1 | YtfJ family protein | - |
| CO706_RS13530 () | 2304930..2305754 | - | 825 | WP_000984978.1 | hypothetical protein | - |
| CO706_RS13535 () | 2305754..2307103 | - | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| CO706_RS13540 () | 2307149..2307907 | - | 759 | WP_000339532.1 | hypothetical protein | - |
| CO706_RS13545 () | 2307939..2308652 | - | 714 | WP_001076097.1 | thymidylate kinase | - |
| CO706_RS13550 () | 2308826..2309518 | + | 693 | WP_001190780.1 | thymidylate kinase | - |
| CO706_RS13555 () | 2309567..2311066 | - | 1500 | WP_000933258.1 | inorganic phosphate transporter PitB | - |
| CO706_RS13560 () | 2311358..2313217 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| CO706_RS13565 () | 2313422..2314288 | + | 867 | WP_001387074.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| CO706_RS13575 () | 2314588..2315568 | + | 981 | WP_000399648.1 | IS110-like element IS621 family transposase | - |
| CO706_RS13580 () | 2315690..2315938 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| CO706_RS13585 () | 2315951..2316292 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| CO706_RS13590 () | 2316285..2316773 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| CO706_RS13595 () | 2316766..2317260 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| CO706_RS13600 () | 2317260..2318963 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| CO706_RS13605 () | 2318960..2320138 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| CO706_RS13610 () | 2320128..2321114 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| CO706_RS13615 () | 2321117..2322235 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| CO706_RS13625 () | 2322424..2322711 | - | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| CO706_RS13630 () | 2322830..2323717 | - | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| CO706_RS13635 () | 2323874..2324914 | + | 1041 | WP_000262151.1 | L-glyceraldehyde 3-phosphate reductase | - |
| CO706_RS13640 () | 2324954..2325448 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| CO706_RS13645 () | 2325639..2326523 | + | 885 | WP_000018758.1 | NADP(+)-dependent aldehyde reductase | - |
| CO706_RS13650 () | 2326562..2326987 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| CO706_RS13655 () | 2326994..2327728 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| CO706_RS13665 () | 2327980..2329167 | + | 1188 | WP_001315867.1 | cystathionine beta-lyase | - |
| CO706_RS13670 () | 2329307..2329966 | + | 660 | WP_000268419.1 | DedA family protein | - |
| CO706_RS13675 () | 2330006..2330905 | - | 900 | WP_024174618.1 | DNA-binding transcriptional regulator YqhC | - |
| CO706_RS13680 () | 2331099..2332262 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| CO706_RS13685 () | 2332367..2333194 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| CO706_RS13690 () | 2333394..2334320 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| CO706_RS13695 () | 2334371..2334628 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| CO706_RS13700 () | 2334671..2336890 | - | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|