MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 155446 bp
Accession: NZ_CP023531 Location: 5081698..5237143 Organism: Escherichia coli strain FDAARGOS_401 Replicon: chromosome
Accession: NZ_CP023531 Location: 5081698..5237143 Organism: Escherichia coli strain FDAARGOS_401 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO703_RS27240 () | 5077684..5079117 | + | 1434 | WP_000869178.1 | bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE | - |
| - () | 5079197..5079338 | + | 142 | NuclAT_6 | - | - |
| - () | 5079197..5079338 | + | 142 | NuclAT_6 | - | - |
| - () | 5079197..5079338 | + | 142 | NuclAT_6 | - | - |
| - () | 5079197..5079338 | + | 142 | NuclAT_6 | - | - |
| CO703_RS29090 () | 5079237..5079296 | - | 60 | WP_001387082.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - () | 5079573..5079714 | + | 142 | NuclAT_1 | - | - |
| - () | 5079573..5079714 | + | 142 | NuclAT_1 | - | - |
| - () | 5079573..5079714 | + | 142 | NuclAT_1 | - | - |
| - () | 5079573..5079714 | + | 142 | NuclAT_1 | - | - |
| - () | 5079573..5079714 | + | 142 | NuclAT_7 | - | - |
| - () | 5079573..5079714 | + | 142 | NuclAT_7 | - | - |
| - () | 5079573..5079714 | + | 142 | NuclAT_7 | - | - |
| - () | 5079573..5079714 | + | 142 | NuclAT_7 | - | - |
| CO703_RS29095 () | 5079613..5079672 | - | 60 | WP_001387081.1 | type I toxin-antitoxin system Ibs family toxin | - |
| CO703_RS27250 () | 5079911..5081572 | - | 1662 | WP_000341046.1 | flotillin family protein | - |
| CO703_RS27255 () | 5081599..5082228 | - | 630 | WP_000599947.1 | DUF1449 family protein | - |
| CO703_RS27260 () | 5082497..5082697 | + | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| CO703_RS27265 () | 5082740..5083804 | - | 1065 | WP_001269793.1 | fimbrial protein | - |
| CO703_RS27270 () | 5083806..5084555 | - | 750 | WP_001387080.1 | hypothetical protein | VF |
| CO703_RS27275 () | 5084571..5087075 | - | 2505 | WP_000277116.1 | hypothetical protein | VF |
| CO703_RS27280 () | 5087135..5087686 | - | 552 | WP_001272149.1 | hypothetical protein | VF |
| CO703_RS27285 () | 5087969..5088259 | - | 291 | WP_001297598.1 | IS1182 family transposase ISBusp4 | Transposase |
| CO703_RS27290 () | 5088633..5089286 | + | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| CO703_RS29365 () | 5089547..5089717 | + | 171 | WP_000469266.1 | hypothetical protein | - |
| CO703_RS27300 () | 5089775..5090548 | - | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| CO703_RS27305 () | 5090691..5091479 | + | 789 | WP_001299419.1 | 4,5-DOPA dioxygenase extradiol | - |
| CO703_RS27310 () | 5091517..5092677 | - | 1161 | WP_000442859.1 | glutathionylspermidine synthase family protein | - |
| CO703_RS27315 () | 5092683..5093354 | - | 672 | WP_000831543.1 | DUF1190 family protein | - |
| CO703_RS27325 () | 5093502..5094983 | - | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| CO703_RS27330 () | 5095188..5095817 | + | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| CO703_RS27335 () | 5095818..5096240 | + | 423 | WP_000833393.1 | DUF1249 family protein | - |
| CO703_RS27340 () | 5096265..5097092 | + | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| CO703_RS27345 () | 5097092..5097673 | + | 582 | WP_000105733.1 | esterase YqiA | - |
| CO703_RS27350 () | 5097702..5099594 | + | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| CO703_RS27355 () | 5099642..5099956 | - | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| CO703_RS27360 () | 5099987..5100568 | - | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| CO703_RS27365 () | 5100887..5101219 | + | 333 | WP_000912120.1 | DUF2645 family protein | - |
| CO703_RS27370 () | 5101265..5102614 | - | 1350 | WP_000673354.1 | two-component system sensor histidine kinase QseC | - |
| CO703_RS27375 () | 5102611..5103270 | - | 660 | WP_001221502.1 | Regulator of RpoS | VF |
| CO703_RS27380 () | 5103422..5103814 | + | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| CO703_RS27385 () | 5103867..5104349 | + | 483 | WP_000183494.1 | transcriptional regulator | - |
| CO703_RS27395 () | 5104895..5107153 | + | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| CO703_RS27400 () | 5107386..5108123 | + | 738 | WP_000965703.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| CO703_RS27405 () | 5108198..5109610 | + | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| CO703_RS27410 () | 5109721..5111940 | + | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| CO703_RS27415 () | 5111983..5112240 | - | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| CO703_RS27420 () | 5112291..5113217 | - | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| CO703_RS27425 () | 5113417..5114244 | - | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| CO703_RS27430 () | 5114349..5115512 | - | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| CO703_RS27435 () | 5115706..5116605 | + | 900 | WP_024174618.1 | DNA-binding transcriptional regulator YqhC | - |
| CO703_RS27440 () | 5116645..5117304 | - | 660 | WP_000268419.1 | DedA family protein | - |
| CO703_RS27445 () | 5117444..5118631 | - | 1188 | WP_001315867.1 | cystathionine beta-lyase | - |
| CO703_RS27455 () | 5118883..5119617 | + | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| CO703_RS27460 () | 5119624..5120049 | + | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| CO703_RS27465 () | 5120088..5120972 | - | 885 | WP_000018758.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| CO703_RS27470 () | 5121163..5121657 | + | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| CO703_RS27475 () | 5121697..5122737 | - | 1041 | WP_000262151.1 | L-glyceraldehyde 3-phosphate reductase | - |
| CO703_RS27480 () | 5122894..5123781 | + | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| CO703_RS27485 () | 5123900..5124187 | + | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| CO703_RS27495 () | 5124376..5125494 | + | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| CO703_RS27500 () | 5125497..5126483 | + | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| CO703_RS27505 () | 5126473..5127651 | + | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| CO703_RS27510 () | 5127648..5129351 | + | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| CO703_RS27515 () | 5129351..5129845 | + | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| CO703_RS27520 () | 5129838..5130326 | + | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| CO703_RS27525 () | 5130319..5130660 | + | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| CO703_RS27530 () | 5130673..5130921 | + | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| CO703_RS27535 () | 5131043..5132023 | - | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| CO703_RS27545 () | 5132323..5133189 | - | 867 | WP_001387074.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| CO703_RS27550 () | 5133394..5135253 | + | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| CO703_RS27560 () | 5135545..5137044 | + | 1500 | WP_000933258.1 | inorganic phosphate transporter PitB | - |
| CO703_RS27565 () | 5137093..5137785 | - | 693 | WP_001190780.1 | thymidylate kinase | - |
| CO703_RS27570 () | 5137959..5138672 | + | 714 | WP_001076097.1 | thymidylate kinase | - |
| CO703_RS27575 () | 5138704..5139462 | + | 759 | WP_000339532.1 | hypothetical protein | - |
| CO703_RS27580 () | 5139508..5140857 | + | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| CO703_RS27585 () | 5140857..5141681 | + | 825 | WP_000984978.1 | hypothetical protein | - |
| CO703_RS27590 () | 5141693..5142253 | + | 561 | WP_001299422.1 | YtfJ family protein | - |
| CO703_RS27595 () | 5142284..5143354 | + | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| CO703_RS27600 () | 5143351..5144430 | + | 1080 | WP_001387073.1 | LPS export ABC transporter permease LptG | - |
| CO703_RS27605 () | 5144465..5145637 | - | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| CO703_RS27610 () | 5145637..5145885 | - | 249 | WP_000248097.1 | acyl carrier protein | - |
| CO703_RS27615 () | 5145917..5146831 | - | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| CO703_RS27620 () | 5146828..5148549 | - | 1722 | WP_001390306.1 | 2-succinylbenzoate--CoA ligase | VF |
| CO703_RS27630 () | 5148920..5150062 | + | 1143 | WP_000388786.1 | DNA-binding protein | - |
| CO703_RS27635 () | 5150069..5150833 | - | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| CO703_RS27640 () | 5151084..5152583 | + | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| CO703_RS27645 () | 5152583..5153635 | + | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| CO703_RS27650 () | 5153646..5154869 | + | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| CO703_RS27655 () | 5154874..5155278 | + | 405 | WP_000853256.1 | protein GlcG | - |
| CO703_RS27660 () | 5155300..5157471 | + | 2172 | WP_000084080.1 | malate synthase G | - |
| CO703_RS27665 () | 5157827..5159509 | + | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| CO703_RS27675 () | 5159995..5164560 | + | 4566 | WP_001034494.1 | hypothetical protein | VF |
| CO703_RS27680 () | 5164700..5165509 | + | 810 | WP_001365924.1 | hypothetical protein | VF |
| CO703_RS27685 () | 5165575..5165985 | + | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| CO703_RS27690 () | 5166003..5166962 | + | 960 | WP_000135063.1 | hypothetical protein | VF |
| CO703_RS27695 () | 5166992..5169052 | + | 2061 | WP_000498829.1 | hypothetical protein | VF |
| CO703_RS27700 () | 5169052..5170545 | + | 1494 | WP_000249348.1 | hypothetical protein | VF |
| CO703_RS27705 () | 5170545..5171768 | + | 1224 | WP_001173453.1 | hypothetical protein | VF |
| CO703_RS27710 () | 5171785..5172240 | + | 456 | WP_001087296.1 | hypothetical protein | VF |
| CO703_RS27715 () | 5172244..5172807 | + | 564 | WP_001115140.1 | hypothetical protein | VF |
| CO703_RS27720 () | 5172804..5173175 | + | 372 | WP_000820125.1 | hypothetical protein | VF |
| CO703_RS27725 () | 5173172..5173771 | + | 600 | WP_001255040.1 | hypothetical protein | VF |
| CO703_RS27730 () | 5173774..5174751 | + | 978 | WP_000633238.1 | hypothetical protein | VF |
| CO703_RS27735 () | 5174748..5175926 | + | 1179 | WP_000094962.1 | hypothetical protein | VF |
| CO703_RS27740 () | 5175928..5176464 | + | 537 | WP_000942795.1 | hypothetical protein | VF |
| CO703_RS27745 () | 5176745..5177587 | - | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| CO703_RS27750 () | 5177672..5177869 | - | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| CO703_RS29100 () | 5177897..5178094 | - | 198 | Protein_4943 | hypothetical protein | - |
| CO703_RS27755 () | 5178091..5178468 | - | 378 | WP_001094429.1 | TA system toxin CbtA family protein | Toxin Detail |
| CO703_RS27760 () | 5178515..5178892 | - | 378 | WP_001285616.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CO703_RS27765 () | 5178972..5179193 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| CO703_RS27770 () | 5179280..5179756 | - | 477 | WP_001388380.1 | RadC family protein | - |
| CO703_RS27775 () | 5179772..5180245 | - | 474 | WP_000855081.1 | antirestriction protein | - |
| CO703_RS27785 () | 5180547..5181365 | - | 819 | WP_001234603.1 | DUF945 domain-containing protein | - |
| CO703_RS27795 () | 5181465..5181698 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| CO703_RS27800 () | 5181777..5182232 | - | 456 | WP_000581502.1 | hypothetical protein | - |
| CO703_RS27805 () | 5182308..5184824 | - | 2517 | WP_001387066.1 | membrane protein | - |
| CO703_RS27810 () | 5184945..5188064 | - | 3120 | WP_000820379.1 | autotransporter adhesin Ag43 | - |
| CO703_RS27815 () | 5188398..5189270 | - | 873 | WP_001069724.1 | GTPase family protein | - |
| CO703_RS27820 () | 5189380..5190399 | - | 1020 | WP_001388379.1 | hypothetical protein | - |
| CO703_RS27835 () | 5191578..5191685 | - | 108 | Protein_4956 | IS1 family transposase | - |
| CO703_RS27845 () | 5191894..5192466 | - | 573 | WP_001170560.1 | hypothetical protein | - |
| CO703_RS27850 () | 5192552..5192758 | - | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| CO703_RS27855 () | 5193457..5193669 | + | 213 | WP_000453331.1 | hemolysin expression modulator Hha | - |
| CO703_RS29370 () | 5193909..5194082 | - | 174 | WP_001387062.1 | hypothetical protein | - |
| CO703_RS27865 () | 5194286..5194855 | + | 570 | WP_000220727.1 | inovirus Gp2 family protein | - |
| CO703_RS29375 () | 5194893..5195051 | + | 159 | WP_000493525.1 | hypothetical protein | - |
| CO703_RS27870 () | 5195023..5195406 | + | 384 | WP_000271022.1 | hypothetical protein | - |
| CO703_RS27875 () | 5195396..5195815 | + | 420 | WP_001387059.1 | hypothetical protein | - |
| CO703_RS27880 () | 5195821..5196003 | + | 183 | WP_001216313.1 | hypothetical protein | - |
| CO703_RS27885 () | 5196124..5196747 | + | 624 | WP_001260266.1 | hypothetical protein | - |
| CO703_RS27890 () | 5196843..5197076 | + | 234 | WP_000124181.1 | hypothetical protein | - |
| CO703_RS27895 () | 5197129..5197320 | - | 192 | WP_001287796.1 | DUF4222 domain-containing protein | - |
| CO703_RS27900 () | 5197827..5198324 | + | 498 | WP_000098939.1 | hypothetical protein | VF |
| CO703_RS27905 () | 5198346..5199707 | + | 1362 | WP_000930193.1 | hypothetical protein | VF |
| CO703_RS27910 () | 5199809..5201053 | + | 1245 | WP_000897032.1 | GIY-YIG nuclease family protein | - |
| CO703_RS27915 () | 5201289..5203034 | + | 1746 | WP_001390303.1 | AAA family ATPase | - |
| CO703_RS27925 () | 5203519..5203686 | + | 168 | Protein_4973 | transcriptional regulator | - |
| CO703_RS27930 () | 5203765..5204034 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| CO703_RS27935 () | 5204055..5204699 | + | 645 | WP_001387055.1 | hypothetical protein | - |
| CO703_RS27940 () | 5204765..5205088 | + | 324 | WP_001387054.1 | hypothetical protein | - |
| CO703_RS27945 () | 5205119..5205698 | - | 580 | Protein_4977 | transposase family protein | - |
| CO703_RS27955 () | 5205908..5206294 | + | 387 | WP_014966195.1 | hypothetical protein | - |
| CO703_RS27960 () | 5206272..5206397 | + | 126 | WP_001420591.1 | hypothetical protein | - |
| CO703_RS27965 () | 5206403..5207419 | - | 1017 | Protein_4980 | IS630 family transposase | - |
| CO703_RS27970 () | 5207815..5208291 | + | 477 | WP_000072549.1 | hypothetical protein | VF |
| CO703_RS27975 () | 5208294..5209772 | + | 1479 | WP_000215053.1 | hypothetical protein | VF |
| CO703_RS27980 () | 5209782..5210288 | + | 507 | WP_000233190.1 | type VI secretion system protein AaiC/Hcp2 | - |
| CO703_RS27985 () | 5210298..5210720 | + | 423 | WP_000555547.1 | hypothetical protein | - |
| CO703_RS27990 () | 5210713..5212515 | + | 1803 | WP_001390300.1 | type VI secretion system baseplate subunit TssF | - |
| CO703_RS27995 () | 5212506..5213438 | + | 933 | WP_001173975.1 | type VI secretion system baseplate subunit TssG | - |
| CO703_RS28000 () | 5213451..5215433 | + | 1983 | WP_000198270.1 | type VI secretion system tip protein VgrG | - |
| CO703_RS28005 () | 5215444..5215911 | + | 468 | WP_000005080.1 | hypothetical protein | - |
| CO703_RS28010 () | 5215921..5216220 | + | 300 | WP_001390299.1 | PAAR domain-containing protein | - |
| CO703_RS28015 () | 5216224..5217300 | + | 1077 | WP_001033155.1 | hypothetical protein | VF |
| CO703_RS28020 () | 5217308..5217859 | + | 552 | WP_000152746.1 | type VI secretion lipoprotein TssJ | - |
| CO703_RS28025 () | 5217878..5219290 | + | 1413 | WP_001154665.1 | type VI secretion system baseplate subunit TssK | - |
| CO703_RS28035 () | 5219629..5220219 | + | 591 | WP_001028113.1 | hypothetical protein | VF |
| CO703_RS28040 () | 5220225..5223629 | + | 3405 | WP_000914956.1 | type VI secretion protein | - |
| CO703_RS28045 () | 5223633..5226182 | + | 2550 | WP_000029846.1 | hypothetical protein | VF |
| CO703_RS28050 () | 5226379..5227590 | + | 1212 | Protein_4996 | IS3 family transposase | - |
| CO703_RS29380 () | 5229348..5229914 | + | 567 | WP_000587872.1 | hypothetical protein | - |
| CO703_RS28070 () | 5229979..5230259 | + | 281 | Protein_4998 | transposase | - |
| CO703_RS28075 () | 5230393..5231547 | + | 1155 | WP_000359994.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| CO703_RS28085 () | 5232413..5232583 | - | 171 | Protein_5000 | ATP-dependent helicase | - |
| CO703_RS28090 () | 5232613..5232801 | - | 189 | Protein_5001 | IS66 family transposase IS682 | Transposase |
| CO703_RS28095 () | 5232862..5233995 | + | 1134 | WP_000555380.1 | IS110 family transposase ISEc45 | Transposase |
| CO703_RS28100 () | 5234035..5234397 | + | 363 | WP_077577697.1 | IS3 family transposase | - |
| CO703_RS28105 () | 5234401..5234544 | + | 144 | Protein_5004 | IS3 family transposase | - |
| CO703_RS28115 () | 5234765..5235745 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| CO703_RS28120 () | 5235929..5237542 | - | 1614 | WP_000080172.1 | IS66-like element ISEc43 family transposase | - |
| CO703_RS28125 () | 5237573..5237923 | - | 351 | WP_000624688.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CO703_RS28130 () | 5237920..5238354 | - | 435 | WP_001309734.1 | IS66 family insertion sequence hypothetical protein | - |
| CO703_RS28135 () | 5238442..5238894 | + | 453 | Protein_5009 | transposase | - |
| CO703_RS28140 () | 5238933..5239175 | + | 243 | Protein_5010 | IS256 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|