MGE detailed information
MGE type: Conjugative plasmid MGE length: 86147 bp
Accession: NZ_CP023387 Location: 1..86147 Organism: Escherichia coli strain 1190 Replicon: plasmid p86
Accession: NZ_CP023387 Location: 1..86147 Organism: Escherichia coli strain 1190 Replicon: plasmid p86
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ48_RS25010 () | 1..873 | + | 873 | WP_000729437.1 | incFII family plasmid replication initiator RepA | - |
| CNQ48_RS25030 () | 1777..2061 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CNQ48_RS25035 () | 2061..2336 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CNQ48_RS25040 () | 2442..2723 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| CNQ48_RS25970 () | 2914..3180 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| CNQ48_RS25055 () | 3180..3656 | - | 477 | WP_001401995.1 | hypothetical protein | - |
| CNQ48_RS25060 () | 3712..4314 | - | 603 | WP_000517694.1 | hypothetical protein | - |
| CNQ48_RS25070 () | 4668..6014 | + | 1347 | WP_001132021.1 | hypothetical protein | - |
| CNQ48_RS25975 () | 6553..6855 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| CNQ48_RS25085 () | 6852..7478 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| CNQ48_RS25090 () | 7682..8953 | - | 1272 | WP_065652137.1 | Y-family DNA polymerase | - |
| CNQ48_RS25095 () | 8953..9390 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CNQ48_RS25100 () | 9387..9635 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CNQ48_RS25110 () | 10054..10956 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| CNQ48_RS25115 () | 10953..11265 | + | 313 | Protein_14 | hypothetical protein | - |
| CNQ48_RS25120 () | 11341..12024 | + | 684 | WP_000086137.1 | DNA methylase | - |
| CNQ48_RS25125 () | 12025..12246 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| CNQ48_RS25130 () | 12260..12694 | + | 435 | WP_000274421.1 | DUF1380 family protein | - |
| CNQ48_RS25135 () | 12739..13509 | + | 771 | WP_001006203.1 | hypothetical protein | - |
| CNQ48_RS25145 () | 14048..14350 | + | 303 | WP_072106536.1 | antirestriction protein | - |
| CNQ48_RS25150 () | 14397..14819 | + | 423 | WP_000271688.1 | DUF1380 family protein | - |
| CNQ48_RS25155 () | 14816..15007 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| CNQ48_RS25875 () | 15145..15426 | + | 282 | WP_154671919.1 | hypothetical protein | - |
| CNQ48_RS25170 () | 15779..16306 | + | 528 | WP_052974665.1 | single-stranded DNA-binding protein | - |
| CNQ48_RS25175 () | 16364..16597 | + | 234 | WP_000005981.1 | DUF905 domain-containing protein | - |
| CNQ48_RS25180 () | 16656..18614 | + | 1959 | WP_052971411.1 | ParB/RepB/Spo0J family partition protein | - |
| CNQ48_RS25185 () | 18669..19103 | + | 435 | WP_000845903.1 | conjugation system SOS inhibitor PsiB | - |
| CNQ48_RS25190 () | 19100..19819 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| CNQ48_RS25195 () | 19816..20412 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| CNQ48_RS25205 () | 20874..21374 | + | 501 | WP_000117631.1 | antirestriction protein ArdA | - |
| CNQ48_RS25220 () | 22107..22541 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| CNQ48_RS25225 () | 22634..22900 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| CNQ48_RS25230 () | 23077..23466 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| CNQ48_RS25235 () | 23463..24377 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| CNQ48_RS25240 () | 24400..24597 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| CNQ48_RS25245 () | 24628..24879 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CNQ48_RS25980 () | 24913..25110 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| CNQ48_RS25260 () | 25459..26307 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| CNQ48_RS25265 () | 26393..26728 | - | 336 | WP_096057941.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CNQ48_RS25270 () | 26961..27293 | + | 333 | WP_001291057.1 | hypothetical protein | - |
| CNQ48_RS25275 () | 27305..30025 | + | 2721 | WP_000991407.1 | Protein TraI | Relaxase |
| CNQ48_RS25280 () | 30246..32546 | - | 2301 | WP_000077653.1 | TraM recognition domain-containing protein | - |
| CNQ48_RS25285 () | 32527..33651 | - | 1125 | WP_000152384.1 | DsbC family protein | - |
| CNQ48_RS25290 () | 33648..34946 | - | 1299 | WP_001363140.1 | IncI1-type conjugal transfer protein TrbA | - |
| CNQ48_RS25880 () | 35284..35430 | + | 147 | WP_001346191.1 | hypothetical protein | - |
| CNQ48_RS25295 () | 36011..36262 | + | 252 | WP_001081067.1 | hypothetical protein | - |
| CNQ48_RS25985 () | 36325..36501 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| CNQ48_RS25300 () | 36652..37119 | - | 468 | WP_096057942.1 | thermonuclease family protein | - |
| CNQ48_RS25885 () | 37279..37902 | + | 624 | WP_001155250.1 | DNA-binding protein | - |
| CNQ48_RS25310 () | 38100..38315 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| CNQ48_RS25315 () | 38319..38687 | - | 369 | WP_001363143.1 | hypothetical protein | - |
| CNQ48_RS25325 () | 38987..39229 | - | 243 | WP_001363144.1 | hypothetical protein | - |
| CNQ48_RS25330 () | 39559..39711 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| CNQ48_RS25340 () | 40338..40985 | - | 648 | WP_024186246.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CNQ48_RS25345 () | 41073..43232 | - | 2160 | WP_000691811.1 | DotA/TraY family protein | - |
| CNQ48_RS25350 () | 43307..43876 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| CNQ48_RS25355 () | 43873..45078 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| CNQ48_RS25360 () | 45036..45656 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| CNQ48_RS25365 () | 45656..48700 | - | 3045 | WP_096057943.1 | conjugal transfer protein | - |
| CNQ48_RS25375 () | 48995..49813 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| CNQ48_RS25380 () | 49728..49979 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| CNQ48_RS25385 () | 50036..50434 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| CNQ48_RS25390 () | 50481..51008 | - | 528 | WP_001388619.1 | conjugal transfer protein TraQ | - |
| CNQ48_RS25395 () | 51008..51721 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| CNQ48_RS25400 () | 51718..53055 | - | 1338 | WP_001272018.1 | conjugal transfer protein TraO | - |
| CNQ48_RS25405 () | 53059..54033 | - | 975 | WP_000547385.1 | hypothetical protein | VF |
| CNQ48_RS25410 () | 54044..54739 | - | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| CNQ48_RS25415 () | 54751..55101 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| CNQ48_RS25420 () | 55118..59179 | - | 4062 | WP_096057944.1 | DNA primase | - |
| CNQ48_RS25425 () | 59243..59533 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| CNQ48_RS25430 () | 59530..60678 | - | 1149 | WP_000775210.1 | putative protein YggR | VF |
| CNQ48_RS25435 () | 60662..61498 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| CNQ48_RS25440 () | 61495..61953 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| CNQ48_RS25445 () | 62057..63259 | - | 1203 | WP_000979993.1 | conjugal transfer protein TraF | - |
| CNQ48_RS25450 () | 63361..64182 | - | 822 | WP_000845373.1 | hypothetical protein | - |
| CNQ48_RS25460 () | 64655..66016 | - | 1362 | WP_001168171.1 | hypothetical protein | VF |
| CNQ48_RS25465 () | 66034..66660 | - | 627 | WP_000939245.1 | prepilin peptidase | - |
| CNQ48_RS25470 () | 66676..67161 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| CNQ48_RS25475 () | 67206..67742 | - | 537 | WP_000111534.1 | hypothetical protein | VF |
| CNQ48_RS25480 () | 67804..68898 | - | 1095 | WP_000697158.1 | type II secretion system F family protein | - |
| CNQ48_RS25485 () | 68900..70408 | - | 1509 | WP_000880805.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CNQ48_RS25490 () | 70512..70970 | - | 459 | WP_000095885.1 | hypothetical protein | VF |
| CNQ48_RS25495 () | 70960..72255 | - | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| CNQ48_RS25500 () | 72276..73895 | - | 1620 | WP_001035565.1 | Outer membrane lipoprotein BfpB | VF |
| CNQ48_RS25505 () | 73927..74364 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| CNQ48_RS25510 () | 74368..75438 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| CNQ48_RS25515 () | 75665..76000 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| CNQ48_RS25520 () | 76116..76433 | - | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| CNQ48_RS25525 () | 76439..78133 | - | 1695 | WP_000482665.1 | flotillin family protein | - |
| CNQ48_RS25530 () | 78160..78780 | - | 621 | WP_000176498.1 | DUF1449 family protein | - |
| CNQ48_RS25535 () | 79087..79947 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CNQ48_RS25540 () | 80130..80687 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CNQ48_RS25545 () | 80850..83855 | + | 3006 | WP_015586051.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CNQ48_RS25555 () | 84001..84663 | - | 663 | WP_000154142.1 | hypothetical protein | - |
| CNQ48_RS25560 () | 84804..85445 | - | 642 | WP_000335849.1 | transcription termination factor NusG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|