MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 98739 bp
Accession: NZ_CP023316 Location: 5557899..5656637 Organism: Pseudomonas aeruginosa strain PPF-1 Replicon: chromosome
Accession: NZ_CP023316 Location: 5557899..5656637 Organism: Pseudomonas aeruginosa strain PPF-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B8B76_RS26470 () | 5553523..5557668 | + | 4146 | WP_023101567.1 | two-partner secretion system exoprotein TpsA4 | - |
| B8B76_RS26475 () | 5558040..5558906 | + | 867 | WP_003111785.1 | ParA family protein | - |
| B8B76_RS26480 () | 5558908..5559645 | + | 738 | WP_003111784.1 | hypothetical protein | - |
| B8B76_RS26485 () | 5559642..5560139 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| B8B76_RS26490 () | 5560145..5560846 | + | 702 | WP_023443554.1 | DUF2786 domain-containing protein | - |
| B8B76_RS26495 () | 5560852..5561025 | + | 174 | Protein_5111 | HNH endonuclease | - |
| B8B76_RS26500 () | 5561009..5561233 | + | 225 | WP_003111780.1 | hypothetical protein | - |
| B8B76_RS26505 () | 5561230..5562573 | + | 1344 | WP_010792218.1 | replicative DNA helicase | - |
| B8B76_RS33170 () | 5563012..5563458 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| B8B76_RS33175 () | 5563642..5564601 | + | 960 | WP_023082651.1 | hypothetical protein | - |
| B8B76_RS26520 () | 5565008..5565193 | + | 186 | WP_003157042.1 | hypothetical protein | - |
| B8B76_RS26525 () | 5565183..5565710 | + | 528 | WP_003448815.1 | hypothetical protein | - |
| B8B76_RS26530 () | 5565707..5565964 | + | 258 | WP_003448812.1 | hypothetical protein | - |
| B8B76_RS33110 () | 5565957..5566196 | + | 240 | WP_023082652.1 | hypothetical protein | - |
| B8B76_RS26535 () | 5566189..5566422 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| B8B76_RS26540 () | 5566422..5567444 | + | 1023 | WP_010792224.1 | nucleoid-associated protein YejK | - |
| B8B76_RS26545 () | 5567441..5568331 | + | 891 | WP_003119279.1 | DNA adenine methylase | - |
| B8B76_RS26550 () | 5568352..5568621 | + | 270 | WP_003448782.1 | Arc family DNA-binding protein | - |
| B8B76_RS26555 () | 5568618..5570351 | + | 1734 | WP_003448780.1 | ParB family protein | - |
| B8B76_RS26560 () | 5570379..5571134 | + | 756 | WP_003121580.1 | DUF2857 domain-containing protein | - |
| B8B76_RS26565 () | 5571137..5572462 | + | 1326 | WP_071536254.1 | hypothetical protein | - |
| B8B76_RS26580 () | 5573492..5573689 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| B8B76_RS26585 () | 5573846..5574574 | + | 729 | WP_023103771.1 | TIGR03761 family integrating conjugative element protein | - |
| B8B76_RS26590 () | 5574580..5575128 | + | 549 | WP_016851606.1 | DUF3158 family protein | - |
| B8B76_RS26595 () | 5575176..5576006 | + | 831 | WP_023103772.1 | Rha family transcriptional regulator | - |
| B8B76_RS26600 () | 5576036..5576524 | + | 489 | WP_023098076.1 | single-stranded DNA-binding protein | - |
| B8B76_RS26610 () | 5577053..5577220 | + | 168 | WP_128729268.1 | CrpP family protein | - |
| B8B76_RS26615 () | 5577336..5579255 | + | 1920 | WP_023103773.1 | type I DNA topoisomerase | - |
| B8B76_RS26620 () | 5579264..5580016 | + | 753 | WP_021205775.1 | hypothetical protein | - |
| B8B76_RS26625 () | 5580336..5582225 | + | 1890 | WP_023103774.1 | hypothetical protein | - |
| B8B76_RS26630 () | 5582222..5584198 | + | 1977 | WP_023125171.1 | DEAD/DEAH box helicase | - |
| B8B76_RS26635 () | 5584339..5584671 | + | 333 | WP_031640358.1 | hypothetical protein | - |
| B8B76_RS26640 () | 5584754..5585044 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| B8B76_RS26645 () | 5585041..5585340 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B8B76_RS26650 () | 5585542..5586666 | + | 1125 | WP_023103776.1 | hypothetical protein | VF |
| B8B76_RS26655 () | 5586666..5588375 | + | 1710 | WP_023125172.1 | Outer membrane lipoprotein BfpB | VF |
| B8B76_RS26660 () | 5588379..5589704 | + | 1326 | WP_023125173.1 | type 4b pilus protein PilO2 | - |
| B8B76_RS26665 () | 5589694..5590227 | + | 534 | WP_023125174.1 | type IV pilus biogenesis protein PilP | - |
| B8B76_RS26670 () | 5590236..5591816 | + | 1581 | WP_023125175.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| B8B76_RS26675 () | 5591816..5592895 | + | 1080 | WP_023125176.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| B8B76_RS26680 () | 5592917..5593447 | + | 531 | WP_023125177.1 | hypothetical protein | VF |
| B8B76_RS26685 () | 5593444..5594400 | + | 957 | WP_023125178.1 | Flp pilus assembly complex ATPase component TadA | - |
| B8B76_RS26690 () | 5594393..5595772 | + | 1380 | WP_023125179.1 | hypothetical protein | VF |
| B8B76_RS26695 () | 5595790..5596227 | + | 438 | WP_023125180.1 | hypothetical protein | VF |
| B8B76_RS33335 () | 5597286..5597531 | + | 246 | WP_003117055.1 | hypothetical protein | - |
| B8B76_RS33340 () | 5597606..5597782 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| B8B76_RS26710 () | 5598244..5598723 | + | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| B8B76_RS33345 () | 5598861..5599019 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| B8B76_RS26715 () | 5599093..5599290 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| B8B76_RS26725 () | 5599775..5600482 | + | 708 | WP_015503589.1 | hypothetical protein | - |
| B8B76_RS26730 () | 5600718..5601068 | + | 351 | WP_023125183.1 | hypothetical protein | - |
| B8B76_RS26735 () | 5601125..5601916 | + | 792 | WP_095694590.1 | DUF3275 family protein | - |
| B8B76_RS26740 () | 5602019..5602381 | + | 363 | WP_023125184.1 | hypothetical protein | - |
| B8B76_RS26745 () | 5602449..5602703 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| B8B76_RS26750 () | 5602796..5603401 | + | 606 | WP_017002264.1 | hypothetical protein | - |
| B8B76_RS26755 () | 5603431..5604876 | + | 1446 | WP_023125185.1 | class I SAM-dependent methyltransferase | - |
| B8B76_RS26760 () | 5604981..5605985 | + | 1005 | Protein_5162 | DEAD/DEAH box helicase family protein | - |
| B8B76_RS26765 () | 5606603..5608321 | + | 1719 | WP_003116815.1 | group II intron reverse transcriptase/maturase | - |
| B8B76_RS26770 () | 5608404..5609648 | + | 1245 | Protein_5164 | DEAD/DEAH box helicase | - |
| B8B76_RS26775 () | 5609703..5610884 | - | 1182 | WP_031640360.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| B8B76_RS26780 () | 5610957..5613923 | - | 2967 | WP_023103787.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| B8B76_RS26785 () | 5613927..5614487 | - | 561 | WP_003282175.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| B8B76_RS26790 () | 5614774..5615340 | - | 567 | WP_004574805.1 | OsmC family protein | - |
| B8B76_RS26795 () | 5615355..5616131 | - | 777 | WP_004574804.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| B8B76_RS26800 () | 5616191..5616775 | - | 585 | WP_004574803.1 | Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR | VF |
| B8B76_RS26805 () | 5616772..5617452 | - | 681 | WP_004574802.1 | cupin domain-containing protein | - |
| B8B76_RS26810 () | 5617922..5618338 | - | 417 | WP_008567175.1 | hypothetical protein | - |
| B8B76_RS26815 () | 5618357..5620039 | - | 1683 | WP_008567178.1 | mercury(II) reductase | - |
| B8B76_RS26820 () | 5620072..5620506 | - | 435 | WP_008567179.1 | organomercurial transporter MerC | - |
| B8B76_RS26825 () | 5620519..5620794 | - | 276 | WP_008567180.1 | mercury resistance system periplasmic binding protein MerP | - |
| B8B76_RS26830 () | 5620808..5621158 | - | 351 | WP_008567181.1 | mercuric ion transporter MerT | - |
| B8B76_RS26835 () | 5621230..5621640 | + | 411 | WP_008567182.1 | IS607 family transposase ISChh1 | Transposase |
| B8B76_RS26845 () | 5622038..5622186 | + | 149 | Protein_5178 | DUF4113 domain-containing protein | - |
| B8B76_RS26850 () | 5622204..5622557 | - | 354 | WP_008567186.1 | hypothetical protein | - |
| B8B76_RS33390 () | 5622629..5623189 | - | 561 | WP_057384455.1 | hypothetical protein ; Integrase | Integrase |
| B8B76_RS26860 () | 5624463..5626049 | - | 1587 | WP_078451582.1 | hypothetical protein | - |
| B8B76_RS26865 () | 5626090..5627247 | - | 1158 | WP_010794485.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B8B76_RS26870 () | 5627366..5627479 | - | 114 | Protein_5183 | hypothetical protein | - |
| B8B76_RS26875 () | 5627472..5627903 | - | 432 | WP_003158166.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| B8B76_RS26880 () | 5628008..5628691 | + | 684 | WP_023103798.1 | SOS response-associated peptidase family protein | - |
| B8B76_RS26890 () | 5629284..5629556 | - | 273 | WP_023092915.1 | hypothetical protein | - |
| B8B76_RS26895 () | 5629774..5630466 | + | 693 | WP_003123350.1 | hypothetical protein | - |
| B8B76_RS26900 () | 5630477..5631232 | + | 756 | WP_023103799.1 | TIGR03759 family integrating conjugative element protein | - |
| B8B76_RS26905 () | 5631217..5631798 | + | 582 | WP_003121011.1 | hypothetical protein | VF |
| B8B76_RS26910 () | 5631795..5632295 | + | 501 | WP_023103800.1 | integrating conjugative element protein | - |
| B8B76_RS26915 () | 5632304..5632573 | + | 270 | WP_023103801.1 | hypothetical protein | - |
| B8B76_RS26920 () | 5632577..5634808 | + | 2232 | WP_023103802.1 | type IV conjugative transfer system coupling protein TraD | - |
| B8B76_RS26925 () | 5634808..5635554 | + | 747 | WP_023103803.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| B8B76_RS26930 () | 5635572..5636063 | + | 492 | WP_031640361.1 | hypothetical protein | - |
| B8B76_RS26935 () | 5636304..5637785 | + | 1482 | WP_023103804.1 | UvrD-helicase domain-containing protein | - |
| B8B76_RS26940 () | 5637894..5638199 | + | 306 | WP_003099832.1 | hypothetical protein | - |
| B8B76_RS26945 () | 5638293..5638631 | + | 339 | WP_020750393.1 | RAQPRD family integrative conjugative element protein | - |
| B8B76_RS26950 () | 5638628..5638867 | + | 240 | WP_003099839.1 | TIGR03758 family integrating conjugative element protein | - |
| B8B76_RS26955 () | 5638885..5639241 | + | 357 | WP_009316297.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| B8B76_RS26960 () | 5639252..5639638 | + | 387 | WP_009316296.1 | TIGR03750 family conjugal transfer protein | - |
| B8B76_RS26965 () | 5639635..5640294 | + | 660 | WP_015648292.1 | TIGR03746 family integrating conjugative element protein | - |
| B8B76_RS26970 () | 5640291..5641175 | + | 885 | WP_023103805.1 | TIGR03749 family integrating conjugative element protein | - |
| B8B76_RS26975 () | 5641159..5642664 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| B8B76_RS26980 () | 5642642..5643085 | + | 444 | WP_020751099.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| B8B76_RS26985 () | 5643085..5646027 | + | 2943 | WP_023103806.1 | conjugative transfer ATPase | - |
| B8B76_RS26990 () | 5646024..5646308 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| B8B76_RS26995 () | 5646305..5646964 | + | 660 | WP_023103807.1 | DsbA family protein | - |
| B8B76_RS27000 () | 5646961..5647179 | - | 219 | WP_023082680.1 | hypothetical protein | - |
| B8B76_RS27005 () | 5647388..5647819 | + | 432 | WP_023518409.1 | TIGR03757 family integrating conjugative element protein | - |
| B8B76_RS27010 () | 5647819..5648757 | + | 939 | WP_033949436.1 | TIGR03756 family integrating conjugative element protein | - |
| B8B76_RS27015 () | 5648775..5650157 | + | 1383 | WP_033949439.1 | integrating conjugative element protein | - |
| B8B76_RS27020 () | 5650157..5650504 | + | 348 | WP_033949445.1 | hypothetical protein | - |
| B8B76_RS27025 () | 5650501..5652045 | + | 1545 | WP_033949448.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| B8B76_RS27030 () | 5652080..5652421 | - | 342 | WP_023103809.1 | DUF3742 family protein | - |
| B8B76_RS27035 () | 5652522..5652706 | + | 185 | Protein_5215 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| B8B76_RS27040 () | 5653036..5654955 | + | 1920 | WP_023103810.1 | helicase/relaxase domain-containing protein | - |
| B8B76_RS27045 () | 5654952..5656253 | + | 1302 | WP_023103811.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| B8B76_RS27065 () | 5657072..5659636 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| B8B76_RS27070 () | 5659792..5660520 | - | 729 | WP_015503650.1 | peptidoglycan editing factor PgeF | - |
| B8B76_RS27075 () | 5660517..5661479 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|