MGE detailed information
MGE type: Genomic_island MGE length: 30600 bp
Accession: NZ_CP023198 Location: 1121926..1152525 Organism: Bifidobacterium breve strain DRBB29 Replicon: chromosome
Accession: NZ_CP023198 Location: 1121926..1152525 Organism: Bifidobacterium breve strain DRBB29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DRBB29_RS05160 () | 1117085..1117480 | + | 396 | WP_050824951.1 | DUF4418 family protein | - |
| DRBB29_RS05165 () | 1117577..1118794 | + | 1218 | WP_106621603.1 | ABC transporter permease | - |
| DRBB29_RS05170 () | 1118796..1119707 | + | 912 | WP_101673761.1 | ABC transporter ATP-binding protein | - |
| DRBB29_RS05175 () | 1119904..1120530 | + | 627 | WP_003829226.1 | 30S ribosomal protein S4 | - |
| DRBB29_RS05180 () | 1121005..1121787 | - | 783 | WP_106621604.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| DRBB29_RS05185 () | 1121926..1122411 | - | 486 | WP_025299774.1 | cytidine deaminase | - |
| DRBB29_RS05190 () | 1122501..1122857 | + | 357 | WP_038426137.1 | SdpI family protein | - |
| DRBB29_RS05195 () | 1122962..1123564 | + | 603 | WP_003829233.1 | transglutaminase family protein | - |
| DRBB29_RS05200 () | 1123571..1123958 | + | 388 | Protein_980 | hypothetical protein | VF |
| DRBB29_RS05205 () | 1123992..1124417 | + | 426 | WP_106621605.1 | hypothetical protein | - |
| DRBB29_RS05210 () | 1124586..1124942 | - | 357 | WP_032739732.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| DRBB29_RS05215 () | 1124929..1125222 | - | 294 | WP_025221547.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| DRBB29_RS05220 () | 1125369..1126445 | + | 1077 | Protein_984 | IS30 family transposase ISBlo7 | Transposase |
| DRBB29_RS05225 () | 1126566..1126886 | - | 321 | WP_016463217.1 | hypothetical protein | - |
| DRBB29_RS05230 () | 1126905..1127522 | - | 618 | WP_157825946.1 | hypothetical protein | - |
| DRBB29_RS05235 () | 1127842..1129767 | - | 1926 | WP_016463219.1 | alpha/beta hydrolase | - |
| DRBB29_RS05240 () | 1130016..1130993 | + | 978 | WP_054322003.1 | winged helix-turn-helix transcriptional regulator | - |
| DRBB29_RS05245 () | 1130973..1132142 | - | 1170 | WP_106622073.1 | MFS transporter | - |
| DRBB29_RS05250 () | 1132206..1133144 | - | 939 | WP_106622074.1 | alpha/beta hydrolase | - |
| DRBB29_RS05255 () | 1133445..1133699 | + | 255 | WP_157825947.1 | DUF4113 domain-containing protein | - |
| DRBB29_RS11460 () | 1133939..1135015 | + | 1077 | Protein_992 | IS3 family transposase ISBlo10 | Transposase |
| DRBB29_RS11465 () | 1134998..1135515 | + | 518 | Protein_993 | IS3 family transposase ISBlo10 | Transposase |
| DRBB29_RS05265 () | 1135664..1136101 | + | 438 | WP_054322017.1 | hypothetical protein | - |
| DRBB29_RS05270 () | 1136234..1137239 | - | 1006 | Protein_995 | restriction endonuclease | - |
| DRBB29_RS05275 () | 1137749..1138201 | + | 453 | WP_106622075.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DRBB29_RS05280 () | 1138210..1139406 | + | 1197 | Protein_997 | Y-family DNA polymerase | - |
| DRBB29_RS05285 () | 1139534..1140283 | + | 750 | WP_106621607.1 | hypothetical protein | - |
| DRBB29_RS05290 () | 1140401..1141303 | + | 903 | WP_157825948.1 | Abi family protein | - |
| DRBB29_RS05295 () | 1141442..1141633 | - | 192 | WP_106622076.1 | IS256 family transposase ISBlo16 | Transposase |
| DRBB29_RS05305 () | 1142850..1143914 | - | 1065 | WP_157825949.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| DRBB29_RS05310 () | 1143812..1145545 | - | 1734 | WP_106622077.1 | site-specific integrase | - |
| DRBB29_RS05315 () | 1146452..1147246 | - | 795 | WP_106621609.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| DRBB29_RS11295 () | 1147534..1147671 | - | 138 | WP_155464254.1 | hypothetical protein | - |
| DRBB29_RS05320 () | 1147739..1148956 | - | 1218 | WP_106621610.1 | MFS transporter | - |
| DRBB29_RS05325 () | 1149558..1149743 | + | 186 | WP_106621611.1 | hypothetical protein | - |
| DRBB29_RS05330 () | 1149740..1150018 | + | 279 | WP_106621612.1 | hypothetical protein | - |
| DRBB29_RS05335 () | 1150015..1150386 | + | 372 | WP_106621613.1 | hypothetical protein | - |
| DRBB29_RS05340 () | 1150383..1150571 | + | 189 | WP_106621614.1 | hypothetical protein | - |
| DRBB29_RS05345 () | 1150568..1150786 | + | 219 | WP_106621615.1 | hypothetical protein | - |
| DRBB29_RS05350 () | 1150773..1151270 | + | 498 | WP_106621616.1 | hypothetical protein | - |
| DRBB29_RS05355 () | 1151404..1152084 | - | 681 | WP_106622078.1 | IS21 family transposase ISBlo1 | Transposase |
| DRBB29_RS05360 () | 1152851..1153909 | + | 1059 | WP_106652058.1 | helix-turn-helix domain-containing protein | - |
| DRBB29_RS05365 () | 1154074..1154319 | + | 246 | WP_101673750.1 | hypothetical protein | - |
| DRBB29_RS11300 () | 1154306..1154479 | + | 174 | WP_157825951.1 | hypothetical protein | - |
| DRBB29_RS05370 () | 1154620..1155646 | + | 1027 | Protein_1016 | AAA family ATPase | - |
| DRBB29_RS05375 () | 1155649..1156047 | + | 399 | WP_106621618.1 | hypothetical protein | - |
| DRBB29_RS05380 () | 1156380..1157249 | + | 870 | WP_157825952.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|