MGE detailed information
MGE type: Genomic_island MGE length: 19975 bp
Accession: NZ_CP023195 Location: 1259958..1279932 Organism: Bifidobacterium breve strain NRBB20 Replicon: chromosome
Accession: NZ_CP023195 Location: 1259958..1279932 Organism: Bifidobacterium breve strain NRBB20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRBB20_RS05580 () | 1255500..1256900 | + | 1401 | WP_016462934.1 | amino acid permease | - |
| NRBB20_RS05585 () | 1257263..1257881 | + | 619 | Protein_1040 | MFS transporter | - |
| NRBB20_RS05590 () | 1257905..1258918 | - | 1014 | WP_198553922.1 | VanZ family protein | - |
| NRBB20_RS05595 () | 1259065..1259889 | + | 825 | WP_106622625.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| NRBB20_RS05600 () | 1259958..1260257 | + | 300 | WP_016462931.1 | DUF2316 family protein | - |
| NRBB20_RS05605 () | 1260298..1260831 | - | 534 | WP_003829402.1 | GNAT family N-acetyltransferase | - |
| NRBB20_RS05610 () | 1260967..1261296 | - | 330 | WP_016462930.1 | hypothetical protein | - |
| NRBB20_RS05630 () | 1262241..1263314 | - | 1074 | WP_007056270.1 | histidine kinase | - |
| NRBB20_RS05635 () | 1263380..1264075 | - | 696 | WP_052790767.1 | response regulator transcription factor | - |
| NRBB20_RS05640 () | 1264201..1264716 | + | 516 | WP_013140733.1 | hypothetical protein | - |
| NRBB20_RS05645 () | 1264713..1265603 | + | 891 | WP_007056280.1 | hypothetical protein | - |
| NRBB20_RS05650 () | 1265600..1266288 | + | 689 | Protein_1050 | putative ABC transporter ATP-binding protein YknY | VF |
| NRBB20_RS05655 () | 1266285..1267454 | + | 1170 | WP_106622626.1 | ABC transporter permease | - |
| NRBB20_RS05660 () | 1267639..1267908 | + | 270 | WP_014483711.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NRBB20_RS05665 () | 1267912..1268205 | + | 294 | WP_014483710.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| NRBB20_RS05675 () | 1268874..1269425 | + | 552 | WP_015438834.1 | ECF RNA polymerase sigma-E factor | VF |
| NRBB20_RS05680 () | 1269459..1270286 | + | 828 | WP_015438835.1 | hypothetical protein | - |
| NRBB20_RS05685 () | 1270418..1271045 | + | 628 | Protein_1056 | hypothetical protein | - |
| NRBB20_RS05690 () | 1271042..1271824 | + | 783 | WP_021649673.1 | hypothetical protein | - |
| NRBB20_RS05695 () | 1271877..1272752 | + | 876 | WP_021649674.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| NRBB20_RS05700 () | 1272806..1273204 | + | 399 | WP_016462921.1 | hypothetical protein | - |
| NRBB20_RS05705 () | 1273299..1273661 | - | 363 | WP_015438840.1 | hypothetical protein | - |
| NRBB20_RS05710 () | 1273785..1274660 | - | 876 | WP_016462920.1 | EamA family transporter | - |
| NRBB20_RS05715 () | 1274864..1275487 | - | 624 | WP_016462919.1 | hypothetical protein | - |
| NRBB20_RS05720 () | 1275484..1276212 | - | 729 | WP_016462918.1 | hypothetical protein | - |
| NRBB20_RS05725 () | 1276215..1276871 | - | 657 | WP_016462917.1 | ATP-binding cassette domain-containing protein | - |
| NRBB20_RS05730 () | 1277408..1277732 | - | 325 | Protein_1065 | Fic family protein | - |
| NRBB20_RS05735 () | 1277729..1277908 | - | 180 | WP_016462915.1 | antitoxin VbhA family protein | - |
| NRBB20_RS05740 () | 1278122..1278763 | + | 642 | WP_003831805.1 | hypothetical protein | - |
| NRBB20_RS10345 () | 1278855..1279148 | + | 294 | WP_198553923.1 | hypothetical protein | - |
| NRBB20_RS10350 () | 1279414..1279632 | + | 219 | WP_198554197.1 | toxin HipA | - |
| NRBB20_RS05755 () | 1279801..1279913 | + | 113 | Protein_1070 | permease | - |
| NRBB20_RS10355 () | 1279948..1280241 | + | 294 | WP_021649853.1 | hypothetical protein | - |
| NRBB20_RS10360 () | 1280385..1280581 | + | 197 | Protein_1072 | permease | - |
| NRBB20_RS05765 () | 1280905..1282485 | + | 1581 | WP_015438846.1 | amino acid permease | - |
| NRBB20_RS05770 () | 1282727..1282966 | - | 240 | WP_014483708.1 | hypothetical protein | - |
| NRBB20_RS05775 () | 1283263..1283616 | + | 354 | WP_014483707.1 | DUF488 domain-containing protein | - |
| NRBB20_RS10365 () | 1283682..1284110 | - | 429 | WP_003831803.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|