MGE detailed information
MGE type: Prophage MGE length: 48889 bp
Accession: NZ_CP022682 Location: 305740..354628 Organism: Staphylococcus aureus strain 78 Replicon: chromosome
Accession: NZ_CP022682 Location: 305740..354628 Organism: Staphylococcus aureus strain 78 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGP84_RS01355 () | 301052..302584 | - | 1533 | WP_000665723.1 | sodium:solute symporter | - |
| CGP84_RS01360 () | 302624..303505 | - | 882 | WP_115288334.1 | N-acetylneuraminate lyase | - |
| CGP84_RS01365 () | 303663..304523 | + | 861 | WP_000291432.1 | ROK family protein | - |
| CGP84_RS01370 () | 304800..305600 | - | 801 | WP_000667382.1 | MurR/RpiR family transcriptional regulator | - |
| CGP84_RS01375 () | 305740..306408 | + | 669 | WP_000936721.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| CGP84_RS01380 () | 306538..307851 | - | 1314 | WP_001077702.1 | YjiH family protein | - |
| CGP84_RS01385 () | 308298..310199 | + | 1902 | Protein_259 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| CGP84_RS01390 () | 310293..311498 | - | 1206 | WP_112367435.1 | site-specific integrase | - |
| CGP84_RS01395 () | 311624..312238 | + | 615 | WP_000191466.1 | hypothetical protein | - |
| CGP84_RS01400 () | 312235..312381 | - | 147 | WP_001013104.1 | hypothetical protein | - |
| CGP84_RS01405 () | 312418..312600 | - | 183 | WP_000705240.1 | hypothetical protein | - |
| CGP84_RS01410 () | 312671..313402 | - | 732 | WP_000511090.1 | XRE family transcriptional regulator | - |
| CGP84_RS01415 () | 313554..313766 | + | 213 | WP_000213811.1 | helix-turn-helix transcriptional regulator | - |
| CGP84_RS01420 () | 313814..314257 | + | 444 | WP_000435357.1 | hypothetical protein | - |
| CGP84_RS14770 () | 314272..314421 | + | 150 | WP_000771849.1 | hypothetical protein | - |
| CGP84_RS01425 () | 314462..314674 | - | 213 | WP_000362644.1 | hypothetical protein | - |
| CGP84_RS01430 () | 314744..314941 | + | 198 | WP_001148860.1 | hypothetical protein | - |
| CGP84_RS01435 () | 314928..315308 | - | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
| CGP84_RS01440 () | 315375..315620 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| CGP84_RS01445 () | 315589..315954 | - | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| CGP84_RS01450 () | 316009..316224 | + | 216 | WP_001097552.1 | hypothetical protein | - |
| CGP84_RS01455 () | 316249..316512 | + | 264 | WP_001124160.1 | helix-turn-helix domain-containing protein | - |
| CGP84_RS01460 () | 316525..316686 | + | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| CGP84_RS01465 () | 316765..317088 | + | 324 | WP_000175000.1 | hypothetical protein | - |
| CGP84_RS01470 () | 317103..317465 | + | 363 | WP_000985985.1 | hypothetical protein | - |
| CGP84_RS01475 () | 317462..318628 | + | 1167 | WP_000762532.1 | DUF2800 domain-containing protein | - |
| CGP84_RS01480 () | 318654..319211 | + | 558 | WP_115288336.1 | DUF2815 family protein | - |
| CGP84_RS01485 () | 319280..321232 | + | 1953 | WP_115288463.1 | DNA polymerase | - |
| CGP84_RS01490 () | 321245..321430 | + | 186 | WP_001164629.1 | DUF3113 family protein | - |
| CGP84_RS01495 () | 321430..321831 | + | 402 | WP_000113974.1 | PVL family protein | - |
| CGP84_RS01500 () | 321831..322085 | + | 255 | WP_000022738.1 | DUF3310 domain-containing protein | - |
| CGP84_RS01505 () | 322085..322333 | + | 249 | WP_000178883.1 | phi PVL orf 51-like protein | - |
| CGP84_RS14775 () | 322345..322512 | + | 168 | WP_001813803.1 | hypothetical protein | - |
| CGP84_RS14780 () | 322505..322567 | + | 63 | Protein_286 | DUF1024 family protein | - |
| CGP84_RS01515 () | 322654..322938 | + | 285 | WP_001566726.1 | hypothetical protein | - |
| CGP84_RS01520 () | 322931..323185 | + | 255 | WP_115288337.1 | DUF1024 family protein | - |
| CGP84_RS01525 () | 323172..323342 | + | 171 | WP_000714406.1 | hypothetical protein | - |
| CGP84_RS01530 () | 323335..323862 | + | 528 | WP_031927912.1 | dUTP pyrophosphatase | - |
| CGP84_RS01535 () | 323899..324105 | + | 207 | WP_031823832.1 | DUF1381 domain-containing protein | - |
| CGP84_RS01540 () | 324102..324296 | + | 195 | WP_031870647.1 | hypothetical protein | - |
| CGP84_RS01545 () | 324293..324496 | + | 204 | WP_001072795.1 | hypothetical protein | - |
| CGP84_RS01550 () | 324489..324725 | + | 237 | WP_000608278.1 | hypothetical protein | - |
| CGP84_RS01555 () | 324715..325104 | + | 390 | WP_001596346.1 | hypothetical protein | - |
| CGP84_RS01560 () | 325101..325253 | + | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| CGP84_RS01565 () | 325321..325521 | + | 201 | WP_000265258.1 | DUF1514 family protein | - |
| CGP84_RS01570 () | 325573..328020 | + | 2448 | WP_000884844.1 | virulence-associated E family protein | - |
| CGP84_RS01575 () | 328129..328227 | - | 99 | WP_078092494.1 | hypothetical protein | - |
| CGP84_RS01580 () | 328361..328651 | + | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| CGP84_RS01585 () | 328632..329995 | + | 1364 | Protein_301 | DEAD/DEAH box helicase | - |
| CGP84_RS01590 () | 330008..330445 | + | 438 | WP_000513699.1 | transcriptional regulator | - |
| CGP84_RS01595 () | 330602..330916 | + | 315 | WP_000160689.1 | HNH endonuclease | - |
| CGP84_RS01600 () | 331045..331350 | + | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| CGP84_RS01605 () | 331340..333031 | + | 1692 | WP_000153555.1 | terminase large subunit | - |
| CGP84_RS01610 () | 333036..334274 | + | 1239 | WP_001100671.1 | phage portal protein | - |
| CGP84_RS01615 () | 334258..335031 | + | 774 | WP_000061866.1 | Clp protease ClpP | - |
| CGP84_RS01620 () | 335043..336206 | + | 1164 | WP_001142733.1 | phage major capsid protein | - |
| CGP84_RS01625 () | 336275..336553 | + | 279 | WP_000050975.1 | head-tail connector protein | - |
| CGP84_RS01630 () | 336565..336897 | + | 333 | WP_000395501.1 | hypothetical protein | - |
| CGP84_RS01635 () | 336894..337295 | + | 402 | WP_000110020.1 | hypothetical protein | - |
| CGP84_RS01640 () | 337296..337691 | + | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| CGP84_RS01645 () | 337726..338367 | + | 642 | WP_000807539.1 | tail protein | - |
| CGP84_RS01650 () | 338459..338914 | + | 456 | WP_000169131.1 | Ig domain-containing protein | - |
| CGP84_RS01655 () | 338972..339322 | + | 351 | WP_000589165.1 | hypothetical protein | - |
| CGP84_RS01660 () | 339364..339522 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| CGP84_RS01665 () | 339536..345736 | + | 6201 | WP_115288338.1 | phage tail tape measure protein | - |
| CGP84_RS01670 () | 345736..346560 | + | 825 | WP_115288339.1 | phage tail family protein | - |
| CGP84_RS01675 () | 346569..348152 | + | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| CGP84_RS01680 () | 348152..348442 | + | 291 | WP_000179860.1 | hypothetical protein | - |
| CGP84_RS01685 () | 348458..350368 | + | 1911 | WP_031887117.1 | hypothetical protein | - |
| CGP84_RS01690 () | 350368..351834 | + | 1467 | WP_000067140.1 | BppU family phage baseplate upper protein | - |
| CGP84_RS01695 () | 351834..352223 | + | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| CGP84_RS01700 () | 352216..352380 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| CGP84_RS01705 () | 352426..352725 | + | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| CGP84_RS01710 () | 352861..353163 | + | 303 | WP_000339144.1 | phage holin | - |
| CGP84_RS01715 () | 353174..354628 | + | 1455 | Protein_327 | N-acetylmuramoyl-L-alanine amidase | - |
| CGP84_RS01730 () | 355765..356592 | - | 828 | WP_000136025.1 | alpha/beta hydrolase | - |
| CGP84_RS01735 () | 356650..357864 | - | 1215 | WP_047213122.1 | NADH-dependent flavin oxidoreductase | - |
| CGP84_RS01740 () | 357960..358058 | + | 99 | WP_001803958.1 | hypothetical protein | - |
| CGP84_RS01745 () | 358172..359173 | + | 1002 | WP_000240064.1 | LLM class flavin-dependent oxidoreductase | - |
| CGP84_RS01750 () | 359207..359539 | + | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|