MGE detailed information
MGE type: Prophage MGE length: 28441 bp
Accession: NZ_CP022578 Location: 2496325..2524765 Organism: Mycobacterium tuberculosis strain WC059 Replicon: chromosome
Accession: NZ_CP022578 Location: 2496325..2524765 Organism: Mycobacterium tuberculosis strain WC059 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHR52_RS12295 () | 2491948..2493609 | + | 1662 | WP_003404830.1 | glucose-6-phosphate isomerase | - |
| CHR52_RS12300 () | 2493625..2494386 | - | 762 | WP_003404829.1 | SDR family oxidoreductase | - |
| CHR52_RS12305 () | 2494392..2494868 | - | 477 | WP_003404828.1 | Fpg/Nei family DNA glycosylase | - |
| CHR52_RS12310 () | 2494897..2495937 | + | 1041 | WP_003898656.1 | DUF4873 domain-containing protein | - |
| CHR52_RS12315 () | 2495995..2496273 | - | 279 | WP_003901948.1 | hypothetical protein | - |
| CHR52_RS12320 () | 2496316..2497089 | + | 774 | WP_003404823.1 | STAS domain-containing protein | - |
| CHR52_RS12325 () | 2497174..2498040 | + | 867 | WP_003404819.1 | TIGR03619 family F420-dependent LLM class oxidoreductase | - |
| CHR52_RS12330 () | 2498287..2500221 | - | 1935 | WP_031695379.1 | fumarylacetoacetate hydrolase family protein | - |
| CHR52_RS12335 () | 2500218..2502497 | - | 2280 | WP_003898655.1 | ATP-dependent DNA ligase | - |
| CHR52_RS12340 () | 2502613..2503434 | + | 822 | WP_003404795.1 | Ku protein | - |
| CHR52_RS12345 () | 2503411..2504316 | - | 906 | WP_003404794.1 | phosphate ABC transporter permease PstA | - |
| CHR52_RS12350 () | 2504318..2505334 | - | 1017 | WP_003404792.1 | phosphate ABC transporter permease subunit PstC | - |
| CHR52_RS12355 () | 2505394..2506518 | - | 1125 | WP_003900236.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| CHR52_RS12360 () | 2506539..2507369 | - | 831 | WP_003898653.1 | phosphate ABC transporter ATP-binding protein | - |
| CHR52_RS12365 () | 2507585..2508697 | + | 1113 | WP_003898652.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| CHR52_RS12370 () | 2508719..2510713 | + | 1995 | WP_003404782.1 | serine/threonine protein kinase PknD | - |
| CHR52_RS12375 () | 2510720..2511634 | - | 915 | WP_003898651.1 | phosphate ABC transporter permease PstA | - |
| CHR52_RS12380 () | 2511631..2512605 | - | 975 | WP_003404779.1 | phosphate ABC transporter permease subunit PstC | - |
| CHR52_RS12385 () | 2512618..2513730 | - | 1113 | WP_003404775.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| CHR52_RS12390 () | 2514002..2514790 | + | 789 | WP_003901945.1 | SDR family oxidoreductase | - |
| CHR52_RS12395 () | 2514844..2515920 | + | 1077 | WP_003404767.1 | hypothetical protein | - |
| CHR52_RS12400 () | 2515997..2516734 | + | 738 | WP_003404764.1 | flavodoxin family protein | - |
| CHR52_RS12405 () | 2516766..2518052 | + | 1287 | WP_003898649.1 | Nramp family divalent metal transporter | - |
| CHR52_RS12410 () | 2518053..2519117 | + | 1065 | WP_003898648.1 | poly-gamma-glutamate hydrolase family protein | - |
| CHR52_RS12415 () | 2519293..2520945 | - | 1653 | WP_003905412.1 | IS607 family element transposase accessory protein TnpB | - |
| CHR52_RS12420 () | 2520945..2521526 | - | 582 | WP_003404760.1 | IS607-like element IS1535 family transposase | - |
| CHR52_RS12425 () | 2521814..2523133 | + | 1320 | WP_003404757.1 | IS256-like element IS1554 family transposase | - |
| CHR52_RS12435 () | 2523446..2523946 | - | 501 | WP_003404756.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CHR52_RS12440 () | 2523943..2524419 | - | 477 | WP_003404754.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CHR52_RS12445 () | 2524508..2524765 | - | 258 | WP_003404750.1 | hypothetical protein | - |
| CHR52_RS12450 () | 2524762..2526543 | - | 1782 | WP_003404749.1 | BCCT family transporter | - |
| CHR52_RS12455 () | 2526987..2527286 | + | 300 | WP_003404748.1 | PE family protein | - |
| CHR52_RS12460 () | 2527301..2528572 | + | 1272 | WP_003404747.1 | PPE family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|