MGE detailed information
MGE type: Conjugative plasmid MGE length: 126877 bp
Accession: NZ_CP022349 Location: 1..126877 Organism: Klebsiella michiganensis strain K516 Replicon: plasmid pK516_KPC
Accession: NZ_CP022349 Location: 1..126877 Organism: Klebsiella michiganensis strain K516 Replicon: plasmid pK516_KPC
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CF000_RS30105 () | 369..1159 | + | 791 | Protein_1 | thioredoxin domain-containing protein | - |
| CF000_RS32070 () | 1287..1884 | + | 598 | Protein_2 | hypothetical protein | - |
| CF000_RS30120 () | 1954..2597 | + | 644 | Protein_3 | hypothetical protein | - |
| CF000_RS30125 () | 2653..3279 | + | 627 | WP_009652809.1 | DUF2726 domain-containing protein | - |
| CF000_RS30130 () | 3276..3842 | + | 567 | WP_052544827.1 | Phospholipase D | VF |
| CF000_RS30135 () | 3975..4241 | + | 267 | WP_042927547.1 | replication regulatory protein RepA | - |
| CF000_RS30145 () | 4465..4542 | + | 78 | WP_009652807.1 | RepA leader peptide Tap | - |
| CF000_RS30150 () | 4535..5554 | + | 1020 | WP_009652816.1 | replication initiation protein | - |
| CF000_RS30160 () | 6539..6718 | + | 180 | Protein_9 | SOS response-associated peptidase | - |
| CF000_RS30165 () | 7048..9855 | - | 2808 | WP_040228250.1 | DEAD/DEAH box helicase family protein | - |
| CF000_RS30170 () | 9865..10365 | - | 501 | WP_040228248.1 | hypothetical protein | - |
| CF000_RS30175 () | 10365..13580 | - | 3216 | WP_040228246.1 | DUF1156 domain-containing protein | - |
| CF000_RS30180 () | 13591..15384 | - | 1794 | WP_064176592.1 | ATP-binding protein | - |
| CF000_RS30185 () | 15392..16468 | - | 1077 | WP_040228241.1 | SIR2 family protein | - |
| CF000_RS30190 () | 16475..17494 | - | 1020 | WP_040227127.1 | hypothetical protein | - |
| CF000_RS30195 () | 17494..19611 | - | 2118 | WP_088903447.1 | DUF499 domain-containing protein | - |
| CF000_RS30200 () | 19990..20607 | + | 618 | Protein_17 | replication protein | - |
| CF000_RS30210 () | 21141..21419 | + | 279 | WP_013213990.1 | hypothetical protein | - |
| CF000_RS30215 () | 21530..21955 | + | 426 | WP_013213989.1 | antirestriction protein | - |
| CF000_RS32250 () | 22083..22238 | + | 156 | WP_013213988.1 | hypothetical protein | - |
| CF000_RS32255 () | 22284..22580 | + | 297 | WP_013213987.1 | transcriptional regulator | - |
| CF000_RS30225 () | 22684..23565 | + | 882 | Protein_22 | IS1182 family transposase ISKpn6 | Transposase |
| CF000_RS30230 () | 23815..24696 | - | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| CF000_RS30235 () | 24972..25952 | - | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| CF000_RS30240 () | 26075..26632 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CF000_RS30245 () | 26795..29800 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CF000_RS30250 () | 29847..30188 | + | 342 | WP_088903446.1 | HNH endonuclease | - |
| CF000_RS30255 () | 30226..30504 | + | 279 | WP_020314648.1 | hypothetical protein | - |
| CF000_RS30260 () | 30822..31433 | + | 612 | WP_020804876.1 | DUF2913 family protein | - |
| CF000_RS30265 () | 31430..32383 | - | 954 | WP_020314639.1 | Recombination-promoting nuclease RpnA | VF |
| CF000_RS30270 () | 32508..32771 | - | 264 | WP_088903441.1 | hypothetical protein | - |
| CF000_RS30275 () | 32791..33411 | - | 621 | WP_020314642.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CF000_RS30280 () | 33820..35223 | + | 1404 | WP_164722696.1 | DNA cytosine methyltransferase | - |
| CF000_RS30285 () | 35258..36454 | - | 1197 | WP_088903440.1 | type II restriction endonuclease | - |
| CF000_RS32075 () | 36508..37673 | + | 1166 | WP_100248964.1 | IS3 family transposase ISKpn37 | Transposase |
| CF000_RS30300 () | 38036..40789 | + | 2754 | WP_075606932.1 | ABC transporter | - |
| CF000_RS30305 () | 40895..41491 | - | 597 | WP_032635043.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| CF000_RS30310 () | 41744..42262 | - | 519 | WP_088903439.1 | hypothetical protein | - |
| CF000_RS30315 () | 43167..43793 | + | 627 | WP_022644718.1 | ParA family protein | - |
| CF000_RS30320 () | 43838..44065 | + | 228 | WP_020314634.1 | hypothetical protein | - |
| CF000_RS30325 () | 44240..45514 | - | 1275 | WP_020314652.1 | Y-family DNA polymerase | - |
| CF000_RS30330 () | 45526..45975 | - | 450 | WP_046960466.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CF000_RS30335 () | 45972..46217 | - | 246 | WP_020314635.1 | DinI-like family protein | - |
| CF000_RS30340 () | 46421..46651 | + | 231 | WP_020314631.1 | hypothetical protein | - |
| CF000_RS30345 () | 46821..47014 | + | 194 | Protein_45 | hypothetical protein | - |
| CF000_RS30350 () | 47086..47676 | + | 591 | Protein_46 | DNA methylase | - |
| CF000_RS30355 () | 47706..50603 | - | 2898 | WP_023307208.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| CF000_RS30360 () | 50698..51303 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| CF000_RS30370 () | 51963..53144 | + | 1182 | WP_004194048.1 | Na+/H+ antiporter NhaA | - |
| CF000_RS30375 () | 53571..53885 | - | 315 | WP_000091613.1 | hypothetical protein | - |
| CF000_RS30380 () | 54140..54496 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| CF000_RS30385 () | 54486..54887 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| CF000_RS30390 () | 54884..55174 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| CF000_RS30395 () | 55249..58215 | + | 2967 | WP_003100881.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| CF000_RS30400 () | 58294..59298 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| CF000_RS30405 () | 59480..59683 | - | 204 | WP_004197809.1 | hypothetical protein | - |
| CF000_RS30410 () | 59697..59900 | - | 204 | WP_004197808.1 | hemolysin expression modulator Hha | - |
| CF000_RS30415 () | 59934..60302 | - | 369 | WP_004197807.1 | hypothetical protein | - |
| CF000_RS30420 () | 60346..60840 | - | 495 | WP_020805591.1 | hypothetical protein | - |
| CF000_RS30425 () | 60871..61443 | - | 573 | WP_020805590.1 | hypothetical protein | - |
| CF000_RS30430 () | 61440..61688 | - | 249 | WP_000272716.1 | hypothetical protein | - |
| CF000_RS30435 () | 62125..62814 | + | 690 | WP_020315560.1 | RES family NAD+ phosphorylase | - |
| CF000_RS30440 () | 62845..63534 | - | 690 | WP_004193995.1 | hypothetical protein | - |
| CF000_RS32260 () | 63674..63871 | + | 198 | Protein_64 | hypothetical protein | - |
| CF000_RS30450 () | 64064..64381 | + | 318 | WP_164876889.1 | hypothetical protein | - |
| CF000_RS30455 () | 64503..64838 | + | 336 | WP_080884178.1 | hypothetical protein | - |
| CF000_RS30460 () | 64889..65629 | + | 741 | WP_164876890.1 | site-specific integrase | - |
| CF000_RS30465 () | 66160..66915 | + | 756 | WP_042078022.1 | replication initiation protein RepE | - |
| CF000_RS30470 () | 67903..68535 | + | 633 | WP_080884176.1 | ParA family protein | - |
| CF000_RS30475 () | 68535..68909 | + | 375 | WP_088903436.1 | hypothetical protein | - |
| CF000_RS30480 () | 69149..70123 | + | 975 | WP_080884175.1 | StbA family protein | - |
| CF000_RS30485 () | 70127..70519 | + | 393 | WP_080884174.1 | plasmid partitioning/stability family protein | - |
| CF000_RS30490 () | 70795..71295 | - | 501 | WP_080884173.1 | hypothetical protein | - |
| CF000_RS30495 () | 72042..72230 | - | 189 | WP_080884172.1 | hypothetical protein | - |
| CF000_RS30500 () | 72313..72600 | - | 288 | WP_032693963.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CF000_RS30505 () | 72597..72848 | - | 252 | WP_032693964.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CF000_RS30510 () | 73015..74289 | - | 1275 | WP_080884171.1 | Y-family DNA polymerase | - |
| CF000_RS30515 () | 74289..74714 | - | 426 | WP_032693966.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CF000_RS30520 () | 74924..75154 | + | 231 | WP_032693967.1 | hypothetical protein | - |
| CF000_RS30525 () | 75589..75822 | + | 234 | WP_080884170.1 | hypothetical protein | - |
| CF000_RS30530 () | 75819..76154 | + | 336 | WP_080884169.1 | hypothetical protein | - |
| CF000_RS30535 () | 76538..77239 | + | 702 | WP_080884168.1 | DNA methylase | - |
| CF000_RS30540 () | 77239..77460 | + | 222 | WP_053390281.1 | hypothetical protein | - |
| CF000_RS30545 () | 77507..77917 | + | 411 | WP_032743904.1 | DUF1380 family protein | - |
| CF000_RS30550 () | 77969..78736 | + | 768 | WP_032743901.1 | hypothetical protein | - |
| CF000_RS30560 () | 79175..79603 | + | 429 | WP_048757062.1 | antirestriction protein | - |
| CF000_RS30565 () | 79648..80154 | + | 507 | WP_048757065.1 | antirestriction protein ArdA | - |
| CF000_RS30570 () | 80197..80388 | + | 192 | WP_000761848.1 | hypothetical protein | - |
| CF000_RS30575 () | 80589..80852 | + | 264 | WP_032425679.1 | DNA polymerase III subunit theta | - |
| CF000_RS30580 () | 80877..81197 | + | 321 | WP_049077843.1 | hypothetical protein | - |
| CF000_RS30590 () | 81842..82399 | + | 558 | WP_075606930.1 | single-stranded DNA-binding protein | - |
| CF000_RS30595 () | 82448..82696 | + | 249 | WP_053390232.1 | DUF905 domain-containing protein | - |
| CF000_RS30600 () | 82767..84767 | + | 2001 | WP_053390231.1 | ParB/RepB/Spo0J family partition protein | - |
| CF000_RS30605 () | 84808..85242 | + | 435 | WP_087498962.1 | conjugation system SOS inhibitor PsiB | - |
| CF000_RS30610 () | 85239..85967 | + | 729 | WP_053390229.1 | plasmid SOS inhibition protein A | - |
| CF000_RS30615 () | 85964..86287 | + | 324 | WP_053390228.1 | hypothetical protein | - |
| CF000_RS30625 () | 87083..87310 | + | 228 | WP_022644716.1 | hypothetical protein | - |
| CF000_RS30630 () | 87403..87633 | + | 231 | WP_020804025.1 | hypothetical protein | - |
| CF000_RS30640 () | 87682..88557 | + | 876 | WP_022644946.1 | DUF4942 domain-containing protein | - |
| CF000_RS30650 () | 89377..89715 | + | 339 | WP_053390250.1 | hypothetical protein | - |
| CF000_RS30655 () | 89770..90117 | + | 348 | WP_053390249.1 | hypothetical protein | - |
| CF000_RS30660 () | 90208..90438 | + | 231 | WP_032744242.1 | hypothetical protein | - |
| CF000_RS30665 () | 90485..91318 | + | 834 | WP_053390248.1 | N-6 DNA methylase | - |
| CF000_RS30675 () | 91967..92509 | + | 543 | WP_053390246.1 | antirestriction protein | - |
| CF000_RS30680 () | 92532..93026 | - | 495 | WP_053390245.1 | hypothetical protein | VF |
| CF000_RS30685 () | 93460..93852 | + | 393 | WP_053390193.1 | relaxosome protein TraM | - |
| CF000_RS30690 () | 94091..94765 | + | 675 | WP_075606928.1 | hypothetical protein | - |
| CF000_RS30695 () | 94959..95120 | + | 162 | WP_172686697.1 | TraY domain-containing protein | - |
| CF000_RS30700 () | 95185..95553 | + | 369 | WP_053390195.1 | type IV conjugative transfer system pilin TraA | - |
| CF000_RS30705 () | 95567..95872 | + | 306 | WP_053390196.1 | type IV conjugative transfer system protein TraL | - |
| CF000_RS30710 () | 95892..96458 | + | 567 | WP_053390197.1 | type IV conjugative transfer system protein TraE | - |
| CF000_RS30715 () | 96445..97179 | + | 735 | WP_053390198.1 | type-F conjugative transfer system secretin TraK | - |
| CF000_RS30720 () | 97179..98599 | + | 1421 | Protein_113 | conjugal transfer protein TraB | - |
| CF000_RS30725 () | 98679..99188 | + | 510 | WP_053390298.1 | conjugal transfer protein TraP | - |
| CF000_RS30730 () | 99211..99780 | + | 570 | WP_075606925.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CF000_RS30735 () | 99892..100170 | + | 279 | WP_053390295.1 | hypothetical protein | - |
| CF000_RS30740 () | 100177..100365 | + | 189 | WP_053390294.1 | hypothetical protein | - |
| CF000_RS30745 () | 100632..100850 | + | 219 | WP_088883385.1 | hypothetical protein | - |
| CF000_RS30750 () | 100847..101146 | + | 300 | WP_053390307.1 | hypothetical protein | - |
| CF000_RS30755 () | 101260..101616 | + | 357 | WP_075606923.1 | hypothetical protein | - |
| CF000_RS30760 () | 101709..104348 | + | 2640 | WP_075606922.1 | type IV secretion system protein TraC | - |
| CF000_RS30765 () | 104348..104737 | + | 390 | WP_060415481.1 | type-F conjugative transfer system protein TrbI | - |
| CF000_RS30770 () | 104734..105360 | + | 627 | WP_060415482.1 | type-F conjugative transfer system protein TraW | - |
| CF000_RS30775 () | 105371..106363 | + | 993 | WP_032736858.1 | conjugal transfer pilus assembly protein TraU | - |
| CF000_RS30780 () | 106376..107002 | + | 627 | WP_075606921.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CF000_RS30785 () | 106999..108954 | + | 1956 | WP_075606920.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CF000_RS30790 () | 108986..109246 | + | 261 | WP_053390216.1 | hypothetical protein | - |
| CF000_RS30795 () | 109239..109850 | + | 612 | WP_053390217.1 | hypothetical protein | - |
| CF000_RS30800 () | 109840..110082 | + | 243 | WP_082226157.1 | conjugal transfer protein TrbE | - |
| CF000_RS30805 () | 110128..110454 | + | 327 | WP_053390219.1 | hypothetical protein | - |
| CF000_RS30810 () | 110475..111227 | + | 753 | WP_053390220.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CF000_RS30815 () | 111238..111474 | + | 237 | WP_053390221.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CF000_RS30820 () | 111449..112009 | + | 561 | WP_039698500.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CF000_RS30825 () | 111996..113366 | + | 1371 | WP_075606918.1 | conjugal transfer protein TraH | - |
| CF000_RS30830 () | 113366..116221 | + | 2856 | WP_075606917.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CF000_RS32080 () | 116238..116909 | + | 672 | WP_088883382.1 | hypothetical protein | - |
| CF000_RS30835 () | 117461..117847 | + | 387 | WP_053390238.1 | hypothetical protein | - |
| CF000_RS30840 () | 117965..120283 | + | 2319 | WP_075606915.1 | type IV conjugative transfer system coupling protein TraD | - |
| CF000_RS30845 () | 120283..125541 | + | 5259 | WP_075606914.1 | Multifunctional conjugation protein TraI | Relaxase |
| CF000_RS30850 () | 125624..126349 | + | 726 | WP_064386205.1 | type-F conjugative transfer system pilin acetylase TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|