MGE detailed information
MGE type: Genomic_island MGE length: 10325 bp
Accession: NZ_CP022229 Location: 1352133..1362457 Organism: Escherichia coli strain WCHEC96200 Replicon: chromosome
Accession: NZ_CP022229 Location: 1352133..1362457 Organism: Escherichia coli strain WCHEC96200 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBR04_RS08495 () | 1347331..1348539 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| DBR04_RS08500 () | 1348565..1349896 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| DBR04_RS08505 () | 1349918..1350907 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| DBR04_RS08510 () | 1351006..1351944 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| DBR04_RS08515 () | 1352133..1352477 | + | 345 | WP_001521376.1 | transcriptional activator TdcR | - |
| DBR04_RS08520 () | 1352733..1353272 | + | 540 | WP_000675749.1 | hypothetical protein | - |
| DBR04_RS08525 () | 1353294..1354481 | + | 1188 | WP_001521377.1 | YhaC family protein | - |
| DBR04_RS08535 () | 1355281..1356426 | - | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| DBR04_RS08540 () | 1356523..1357413 | - | 891 | WP_021523278.1 | 2-hydroxy-3-oxopropionate reductase | - |
| DBR04_RS08545 () | 1357443..1358213 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| DBR04_RS08550 () | 1358229..1359563 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| DBR04_RS08555 () | 1359938..1361509 | + | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| DBR04_RS08560 () | 1361658..1361993 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| DBR04_RS08565 () | 1361993..1362457 | + | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| DBR04_RS08570 () | 1362512..1363321 | - | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| DBR04_RS08575 () | 1363570..1364850 | + | 1281 | WP_001521382.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| DBR04_RS08580 () | 1364873..1365346 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| DBR04_RS08585 () | 1365357..1366136 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| DBR04_RS08590 () | 1366126..1367004 | + | 879 | WP_001298314.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| DBR04_RS08595 () | 1367022..1367456 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|