MGE detailed information
MGE type: Genomic_island MGE length: 43705 bp
Accession: NZ_CP022000 Location: 2645165..2688869 Organism: Pseudomonas aeruginosa strain Pa127 Replicon: chromosome
Accession: NZ_CP022000 Location: 2645165..2688869 Organism: Pseudomonas aeruginosa strain Pa127 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CD797_RS12840 () | 2640358..2640714 | + | 357 | WP_003099086.1 | 50S ribosomal protein L20 | - |
| CD797_RS12845 () | 2640812..2641828 | + | 1017 | WP_023095443.1 | phenylalanine--tRNA ligase subunit alpha | - |
| CD797_RS12850 () | 2641863..2644241 | + | 2379 | WP_003116602.1 | phenylalanine--tRNA ligase subunit beta | - |
| CD797_RS12855 () | 2644245..2644547 | + | 303 | WP_003090661.1 | integration host factor subunit alpha | - |
| CD797_RS12860 () | 2644528..2644884 | + | 357 | WP_003090655.1 | MerR family transcriptional regulator | - |
| CD797_RS34435 () | 2645165..2646016 | - | 852 | WP_125176821.1 | hypothetical protein | - |
| CD797_RS12875 () | 2646615..2646869 | + | 255 | WP_034065961.1 | AlpA family transcriptional regulator | - |
| CD797_RS12880 () | 2647336..2648034 | + | 699 | WP_034065959.1 | inovirus Gp2 family protein | - |
| CD797_RS12885 () | 2648371..2650284 | + | 1914 | WP_079389568.1 | hypothetical protein | - |
| CD797_RS12890 () | 2650495..2651397 | + | 903 | WP_034065956.1 | WYL domain-containing protein | - |
| CD797_RS12895 () | 2651402..2653480 | + | 2079 | WP_034065955.1 | RecQ family ATP-dependent DNA helicase | - |
| CD797_RS12900 () | 2653477..2654886 | + | 1410 | WP_034065954.1 | DNA-processing protein DprA | - |
| CD797_RS12905 () | 2654952..2656448 | + | 1497 | WP_198345167.1 | type I restriction-modification system subunit M | - |
| CD797_RS12910 () | 2656445..2657971 | + | 1527 | WP_034065951.1 | type I restriction-modification system subunit M | - |
| CD797_RS12915 () | 2657964..2659172 | + | 1209 | WP_034065950.1 | restriction endonuclease subunit S | - |
| CD797_RS12920 () | 2659162..2662161 | + | 3000 | WP_034065949.1 | HsdR family type I site-specific deoxyribonuclease | - |
| CD797_RS12925 () | 2662174..2664395 | + | 2222 | Protein_2501 | AAA family ATPase | - |
| CD797_RS12930 () | 2664395..2665534 | + | 1140 | WP_034065963.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| CD797_RS12935 () | 2665655..2666155 | + | 501 | WP_087930948.1 | hypothetical protein | - |
| CD797_RS12940 () | 2666183..2667166 | - | 984 | WP_013973047.1 | IS5 family transposase IS2000 | Transposase |
| CD797_RS12945 () | 2667241..2668467 | + | 1227 | Protein_2505 | hypothetical protein | - |
| CD797_RS12950 () | 2668661..2668843 | - | 183 | WP_034065757.1 | hypothetical protein | - |
| CD797_RS12955 () | 2668853..2669347 | - | 495 | WP_034065758.1 | DNA repair protein RadC | - |
| CD797_RS12960 () | 2669319..2669998 | - | 680 | Protein_2508 | hypothetical protein | - |
| CD797_RS12965 () | 2670091..2671095 | - | 1005 | WP_034065759.1 | YqaJ viral recombinase family protein | - |
| CD797_RS12970 () | 2671175..2672143 | - | 969 | WP_034065760.1 | DUF932 domain-containing protein | - |
| CD797_RS12975 () | 2672241..2672513 | - | 273 | WP_178097537.1 | hypothetical protein | - |
| CD797_RS12980 () | 2672921..2678968 | + | 6048 | WP_034065761.1 | hypothetical protein | - |
| CD797_RS12985 () | 2679121..2679366 | + | 246 | WP_034065762.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CD797_RS12990 () | 2679490..2679762 | + | 273 | WP_003155922.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| CD797_RS12995 () | 2679750..2680043 | + | 294 | WP_010953434.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CD797_RS13000 () | 2680037..2681446 | - | 1410 | WP_034065764.1 | Prophage integrase IntA ; Integrase | Integrase |
| CD797_RS13005 () | 2681863..2682564 | - | 702 | WP_031640384.1 | hypothetical protein | - |
| CD797_RS13010 () | 2682680..2682826 | + | 147 | Protein_2518 | DNA binding protein | - |
| CD797_RS34875 () | 2682954..2684030 | - | 1077 | WP_049875006.1 | hypothetical protein | - |
| CD797_RS13020 () | 2684734..2685219 | - | 486 | WP_073699702.1 | hypothetical protein | - |
| CD797_RS13025 () | 2685216..2686379 | - | 1164 | WP_031636348.1 | DUF4297 domain-containing protein | - |
| CD797_RS13030 () | 2686855..2687274 | - | 420 | Protein_2522 | group II truncated hemoglobin | - |
| CD797_RS13040 () | 2687497..2688659 | - | 1163 | Protein_2523 | IS3 family transposase | - |
| CD797_RS34445 () | 2688726..2688869 | - | 144 | Protein_2524 | type I toxin-antitoxin system SymE family toxin | - |
| CD797_RS13045 () | 2689034..2690383 | - | 1350 | WP_023095451.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|