MGE detailed information
MGE type: Genomic_island MGE length: 41305 bp
Accession: NZ_CP021844 Location: 2542450..2583754 Organism: Escherichia coli strain EC1515 Replicon: chromosome
Accession: NZ_CP021844 Location: 2542450..2583754 Organism: Escherichia coli strain EC1515 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDH89_RS13065 () | 2537511..2539046 | - | 1536 | WP_021577467.1 | autoinducer 2 ABC transporter ATP-binding protein LsrA | - |
| CDH89_RS13070 () | 2539295..2540248 | + | 954 | WP_021577466.1 | transcriptional regulator LsrR | - |
| CDH89_RS13075 () | 2540327..2541919 | + | 1593 | WP_021577465.1 | autoinducer-2 kinase | - |
| CDH89_RS13080 () | 2542450..2543652 | + | 1203 | Protein_2416 | autotransporter barrel domain-containing lipoprotein | - |
| CDH89_RS13085 () | 2543743..2544108 | + | 366 | Protein_2417 | IS3 family transposase IS2 | Transposase |
| CDH89_RS13090 () | 2544123..2544557 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| CDH89_RS13095 () | 2544629..2544979 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| CDH89_RS13100 () | 2544993..2545268 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| CDH89_RS13105 () | 2545304..2545726 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| CDH89_RS13110 () | 2545778..2547472 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| CDH89_RS13115 () | 2547490..2547852 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| CDH89_RS13120 () | 2547849..2548085 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| CDH89_RS13125 () | 2548121..2548789 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| CDH89_RS13135 () | 2548864..2550114 | + | 1251 | Protein_2426 | Transposon Tn7 transposition protein TnsB ; Integrase | Integrase |
| CDH89_RS13140 () | 2550179..2550883 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CDH89_RS13150 () | 2551518..2552747 | + | 1230 | WP_032492336.1 | Putative bacilysin exporter BacE | ARG |
| CDH89_RS13155 () | 2552893..2553756 | + | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| CDH89_RS13160 () | 2553794..2554039 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| CDH89_RS13170 () | 2554508..2555299 | + | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| CDH89_RS28530 () | 2555302..2555577 | - | 276 | WP_109023896.1 | hypothetical protein | - |
| CDH89_RS13175 () | 2555600..2556232 | + | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| CDH89_RS13185 () | 2556479..2556811 | - | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| CDH89_RS13190 () | 2556981..2557772 | - | 792 | WP_001206316.1 | Streptomycin 3''-adenylyltransferase | ARG |
| CDH89_RS13195 () | 2557865..2559124 | - | 1260 | WP_000095725.1 | Bicyclomycin resistance protein | ARG |
| CDH89_RS13200 () | 2559386..2559670 | - | 285 | WP_088172401.1 | DUF4111 domain-containing protein | - |
| CDH89_RS13205 () | 2559665..2562277 | + | 2613 | Protein_2438 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| CDH89_RS13210 () | 2562304..2563197 | + | 894 | Protein_2439 | IS3 family transposase IS2 | Transposase |
| CDH89_RS13215 () | 2563191..2567432 | + | 4242 | Protein_2440 | Outer membrane protein IcsA autotransporter | VF |
| CDH89_RS13220 () | 2567643..2567909 | + | 267 | WP_001613070.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| CDH89_RS13225 () | 2567909..2569231 | + | 1323 | WP_021577463.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| CDH89_RS13230 () | 2569502..2569771 | + | 270 | Protein_2443 | helix-turn-helix transcriptional regulator | - |
| CDH89_RS13235 () | 2570205..2570768 | + | 564 | WP_000768279.1 | Type-1 fimbrial protein, A chain | VF |
| CDH89_RS13240 () | 2571129..2571839 | + | 711 | WP_157698273.1 | Chaperone protein FocC | VF |
| CDH89_RS13245 () | 2571881..2574532 | + | 2652 | WP_021577462.1 | Outer membrane usher protein FimD | VF |
| CDH89_RS13250 () | 2574546..2575076 | + | 531 | WP_000876784.1 | Protein FimF | VF |
| CDH89_RS13255 () | 2575089..2575592 | + | 504 | WP_000825446.1 | Protein FimG | VF |
| CDH89_RS13260 () | 2575652..2576566 | + | 915 | WP_000520683.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| CDH89_RS13265 () | 2576900..2579179 | + | 2280 | WP_000726699.1 | acid resistance putative oxidoreductase YdeP | - |
| CDH89_RS13270 () | 2579427..2579624 | + | 198 | WP_000543389.1 | two-component system connector SafA | - |
| CDH89_RS13275 () | 2579699..2580460 | + | 762 | WP_088172397.1 | acid stress response transcriptional regulator YdeO | - |
| CDH89_RS13280 () | 2580863..2582545 | + | 1683 | WP_001303114.1 | sulfatase | - |
| CDH89_RS13285 () | 2582597..2583754 | + | 1158 | WP_021577461.1 | anaerobic sulfatase maturase | - |
| CDH89_RS28220 () | 2583720..2583842 | - | 123 | WP_122986402.1 | hypothetical protein | - |
| CDH89_RS13290 () | 2584045..2585730 | + | 1686 | WP_024248341.1 | ABC transporter ATP-binding protein/permease | - |
| CDH89_RS13295 () | 2585768..2588140 | + | 2373 | WP_000832494.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|