MGE detailed information
MGE type: Genomic_island MGE length: 40096 bp
Accession: NZ_CP021840 Location: 4023483..4063578 Organism: Escherichia coli strain EC974 Replicon: chromosome
Accession: NZ_CP021840 Location: 4023483..4063578 Organism: Escherichia coli strain EC974 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDH88_RS20075 () | 4020298..4021983 | - | 1686 | WP_024248341.1 | ABC transporter ATP-binding protein/permease | - |
| CDH88_RS28260 () | 4022186..4022308 | + | 123 | WP_122986402.1 | hypothetical protein | - |
| CDH88_RS20080 () | 4022274..4023431 | - | 1158 | WP_021577461.1 | anaerobic sulfatase maturase | - |
| CDH88_RS20085 () | 4023483..4025165 | - | 1683 | WP_001303114.1 | sulfatase | - |
| CDH88_RS20090 () | 4025568..4026329 | - | 762 | WP_088172397.1 | acid stress response transcriptional regulator YdeO | - |
| CDH88_RS20095 () | 4026404..4026601 | - | 198 | WP_000543389.1 | two-component system connector SafA | - |
| CDH88_RS20100 () | 4026849..4029128 | - | 2280 | WP_000726699.1 | acid resistance putative oxidoreductase YdeP | - |
| CDH88_RS20105 () | 4029462..4030376 | - | 915 | WP_000520683.1 | hypothetical protein | VF |
| CDH88_RS20110 () | 4030436..4030939 | - | 504 | WP_000825446.1 | hypothetical protein | VF |
| CDH88_RS20115 () | 4030952..4031482 | - | 531 | WP_000876784.1 | hypothetical protein | VF |
| CDH88_RS20120 () | 4031496..4034147 | - | 2652 | WP_021577462.1 | hypothetical protein | VF |
| CDH88_RS20125 () | 4034189..4034899 | - | 711 | WP_157698273.1 | hypothetical protein | VF |
| CDH88_RS20130 () | 4035260..4035823 | - | 564 | WP_000768279.1 | hypothetical protein | VF |
| CDH88_RS20135 () | 4036257..4036526 | - | 270 | Protein_3685 | helix-turn-helix transcriptional regulator | - |
| CDH88_RS20140 () | 4036797..4038119 | - | 1323 | WP_021577463.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| CDH88_RS20145 () | 4038119..4038385 | - | 267 | WP_001613070.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| CDH88_RS20150 () | 4038596..4042837 | - | 4242 | Protein_3688 | hypothetical protein | VF |
| CDH88_RS20155 () | 4042831..4043724 | - | 894 | Protein_3689 | IS3 family transposase IS2 | Transposase |
| CDH88_RS20160 () | 4043751..4046363 | - | 2613 | Protein_3690 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| CDH88_RS20165 () | 4046358..4046642 | + | 285 | WP_088172401.1 | DUF4111 domain-containing protein | - |
| CDH88_RS20170 () | 4046904..4048163 | + | 1260 | WP_000095725.1 | Multidrug resistance protein MdtL | ARG |
| CDH88_RS20175 () | 4048256..4049047 | + | 792 | WP_001206316.1 | hypothetical protein | ARG |
| CDH88_RS20180 () | 4049217..4049549 | + | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| CDH88_RS20190 () | 4049796..4050428 | - | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| CDH88_RS28500 () | 4050451..4050726 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| CDH88_RS20195 () | 4050729..4051520 | - | 792 | WP_000034420.1 | hypothetical protein | ARG |
| CDH88_RS20205 () | 4051989..4052234 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| CDH88_RS20210 () | 4052272..4053135 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| CDH88_RS20215 () | 4053281..4054510 | - | 1230 | WP_032492336.1 | hypothetical protein | ARG |
| CDH88_RS20225 () | 4055145..4055849 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CDH88_RS20230 () | 4055914..4057164 | - | 1251 | Protein_3702 | hypothetical protein ; Integrase | Integrase |
| CDH88_RS20240 () | 4057239..4057907 | - | 669 | WP_001300294.1 | hypothetical protein | VF |
| CDH88_RS20245 () | 4057943..4058179 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| CDH88_RS20250 () | 4058176..4058538 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| CDH88_RS20255 () | 4058556..4060250 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| CDH88_RS20260 () | 4060302..4060724 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| CDH88_RS20265 () | 4060760..4061035 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| CDH88_RS20270 () | 4061049..4061399 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| CDH88_RS20275 () | 4061471..4061905 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| CDH88_RS20280 () | 4061920..4062285 | - | 366 | Protein_3711 | IS3 family transposase IS2 | Transposase |
| CDH88_RS20285 () | 4062376..4063578 | - | 1203 | Protein_3712 | autotransporter barrel domain-containing lipoprotein | - |
| CDH88_RS20290 () | 4064109..4065701 | - | 1593 | WP_021577465.1 | autoinducer-2 kinase | - |
| CDH88_RS20295 () | 4065780..4066733 | - | 954 | WP_021577466.1 | transcriptional regulator LsrR | - |
| CDH88_RS20300 () | 4066982..4068517 | + | 1536 | WP_021577467.1 | autoinducer 2 ABC transporter ATP-binding protein LsrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|