MGE detailed information
MGE type: Genomic_island MGE length: 69374 bp
Accession: NZ_CP021454 Location: 802277..871650 Organism: Escherichia coli strain H105 Replicon: chromosome
Accession: NZ_CP021454 Location: 802277..871650 Organism: Escherichia coli strain H105 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCL28_RS04115 () | 798251..798787 | + | 537 | WP_000942771.1 | GspM family type II secretion system protein YghD | - |
| CCL28_RS04120 () | 799845..800621 | + | 777 | WP_000124287.1 | ABC transporter permease | - |
| CCL28_RS04125 () | 800618..801292 | + | 675 | WP_000590243.1 | ABC transporter ATP-binding protein | - |
| CCL28_RS26655 () | 801670..801826 | + | 157 | Protein_763 | transposase | - |
| CCL28_RS04130 () | 802277..802993 | + | 717 | WP_000634338.1 | hypothetical protein | - |
| CCL28_RS04135 () | 803428..805116 | + | 1689 | WP_022645101.1 | hypothetical protein | VF |
| CCL28_RS04140 () | 805213..806247 | - | 1035 | Protein_766 | IS481 family transposase | - |
| CCL28_RS04145 () | 806408..807625 | + | 1218 | Protein_767 | UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD | VF |
| CCL28_RS04150 () | 807641..808338 | - | 698 | Protein_768 | IS1 family transposase IS1R | Transposase |
| CCL28_RS26660 () | 808394..808747 | + | 354 | Protein_769 | glycosyltransferase family 2 protein | - |
| CCL28_RS04160 () | 808789..809967 | + | 1179 | WP_001305084.1 | UDP-glucose 6-dehydrogenase | VF |
| CCL28_RS04165 () | 810306..811475 | - | 1170 | WP_001161856.1 | hypothetical protein | VF |
| CCL28_RS04170 () | 811510..813537 | - | 2028 | WP_000579513.1 | hypothetical protein | VF |
| CCL28_RS04175 () | 813534..814274 | - | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| CCL28_RS04180 () | 814284..815960 | - | 1677 | WP_001305083.1 | Polysialic acid transport protein KpsD | VF |
| CCL28_RS04185 () | 815984..817132 | - | 1149 | WP_000905920.1 | hypothetical protein | VF |
| CCL28_RS04190 () | 817204..818187 | - | 984 | WP_001296394.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| CCL28_RS04195 () | 818998..819153 | - | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| CCL28_RS04205 () | 819585..820518 | - | 934 | Protein_778 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| CCL28_RS04210 () | 820511..820906 | - | 396 | WP_000208384.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| CCL28_RS04215 () | 820975..821820 | - | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| CCL28_RS04220 () | 821905..822102 | - | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| CCL28_RS04225 () | 822119..822607 | - | 489 | WP_000761699.1 | hypothetical protein | - |
| CCL28_RS04230 () | 822604..822981 | - | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| CCL28_RS04235 () | 823070..823438 | - | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CCL28_RS04240 () | 823488..824132 | - | 645 | WP_000094916.1 | hypothetical protein | - |
| CCL28_RS04245 () | 824151..824372 | - | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| CCL28_RS04250 () | 824435..824911 | - | 477 | WP_001186726.1 | RadC family protein | - |
| CCL28_RS04255 () | 824927..825412 | - | 486 | WP_000849565.1 | antirestriction protein | - |
| CCL28_RS04260 () | 825467..826285 | - | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| CCL28_RS04270 () | 826386..826619 | - | 234 | WP_000902034.1 | DUF905 family protein | - |
| CCL28_RS04275 () | 826698..827153 | - | 456 | WP_000581502.1 | hypothetical protein | - |
| CCL28_RS04280 () | 827229..828356 | - | 1128 | Protein_792 | hypothetical protein | - |
| CCL28_RS04285 () | 828451..831573 | - | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| CCL28_RS04290 () | 831907..832779 | - | 873 | WP_001069668.1 | GTPase family protein | - |
| CCL28_RS04305 () | 834111..835601 | + | 1491 | WP_001305029.1 | DUF3987 domain-containing protein | - |
| CCL28_RS04310 () | 835722..836294 | - | 573 | WP_001296389.1 | hypothetical protein | - |
| CCL28_RS26665 () | 836380..836586 | - | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| CCL28_RS04320 () | 837534..837683 | + | 150 | WP_071528377.1 | hemolysin activation protein | - |
| CCL28_RS27245 () | 838016..838213 | - | 198 | WP_001547002.1 | hypothetical protein | - |
| CCL28_RS04335 () | 838412..838981 | + | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| CCL28_RS04340 () | 839190..839531 | + | 342 | WP_042012683.1 | hypothetical protein | - |
| CCL28_RS27025 () | 839528..839713 | + | 186 | Protein_802 | hypothetical protein | - |
| CCL28_RS04350 () | 839752..841290 | - | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| CCL28_RS04355 () | 841290..842387 | - | 1098 | Protein_804 | IS66 family transposase IS682 | Transposase |
| CCL28_RS04360 () | 842418..842768 | - | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| CCL28_RS04365 () | 842765..843190 | - | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| CCL28_RS04375 () | 843562..843699 | - | 138 | WP_085949591.1 | transposase domain-containing protein | - |
| CCL28_RS04380 () | 843851..844768 | + | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| CCL28_RS04385 () | 844802..845677 | + | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| CCL28_RS04390 () | 845726..847198 | + | 1473 | WP_000376547.1 | MFS transporter | - |
| CCL28_RS04395 () | 847202..848032 | + | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| CCL28_RS04400 () | 848078..848788 | + | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| CCL28_RS04405 () | 848801..849910 | + | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| CCL28_RS04410 () | 849960..850895 | + | 936 | WP_001305022.1 | alpha/beta hydrolase | - |
| CCL28_RS04415 () | 850931..851665 | - | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| CCL28_RS04420 () | 851765..852751 | + | 987 | WP_000274668.1 | hypothetical protein | - |
| CCL28_RS04425 () | 852903..854131 | + | 1229 | WP_096928816.1 | IS3 family transposase IS2 | Transposase |
| CCL28_RS04440 () | 854631..856721 | + | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| CCL28_RS26670 () | 856939..857098 | - | 160 | Protein_819 | transposase domain-containing protein | - |
| CCL28_RS04450 () | 857583..857825 | + | 243 | WP_001296383.1 | hypothetical protein | - |
| CCL28_RS04460 () | 858116..858475 | + | 360 | WP_001296382.1 | hypothetical protein | - |
| CCL28_RS04465 () | 858479..858694 | + | 216 | WP_000266542.1 | hypothetical protein | - |
| CCL28_RS04475 () | 859272..859594 | - | 323 | Protein_823 | IS110 family transposase | - |
| CCL28_RS04480 () | 859614..860123 | + | 510 | Protein_824 | L-lactate permease | - |
| CCL28_RS04485 () | 860157..861689 | - | 1533 | Protein_825 | IS3 family transposase | - |
| CCL28_RS04490 () | 861912..863525 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| CCL28_RS04495 () | 863556..863906 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| CCL28_RS04500 () | 863903..864328 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| CCL28_RS04505 () | 864645..865067 | - | 423 | Protein_829 | hypothetical protein | - |
| CCL28_RS04510 () | 865112..866002 | - | 891 | Protein_830 | IS3 family transposase ISSd1 | Transposase |
| CCL28_RS04515 () | 866015..867166 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| CCL28_RS04520 () | 867231..867491 | - | 261 | Protein_832 | IS3 family transposase ISSfl10 | Transposase |
| CCL28_RS04525 () | 867763..871650 | - | 3888 | WP_001034083.1 | Serine protease sat autotransporter | VF |
| CCL28_RS27030 () | 871900..872043 | + | 144 | WP_011076574.1 | hypothetical protein | - |
| CCL28_RS04535 () | 872594..874795 | - | 2202 | WP_000973516.1 | ferric aerobactin receptor IutA | - |
| CCL28_RS04540 () | 874877..876154 | - | 1278 | WP_000750130.1 | NADPH-dependent L-lysine N(6)-monooxygenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|