MGE detailed information
MGE type: Genomic_island MGE length: 24460 bp
Accession: NZ_CP021454 Location: 4431856..4456315 Organism: Escherichia coli strain H105 Replicon: chromosome
Accession: NZ_CP021454 Location: 4431856..4456315 Organism: Escherichia coli strain H105 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCL28_RS23020 () | 4427952..4428290 | + | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| CCL28_RS23025 () | 4428266..4429963 | + | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| CCL28_RS23030 () | 4430000..4430575 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| CCL28_RS23045 () | 4431374..4432911 | + | 1538 | Protein_4239 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CCL28_RS23055 () | 4433277..4434611 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CCL28_RS23060 () | 4434691..4436838 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| CCL28_RS23065 () | 4436897..4438354 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| CCL28_RS23070 () | 4438591..4440108 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| CCL28_RS23075 () | 4440227..4440400 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CCL28_RS23080 () | 4440428..4440724 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CCL28_RS23085 () | 4440952..4441224 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CCL28_RS23090 () | 4441438..4445367 | - | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| CCL28_RS23100 () | 4446523..4447353 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| CCL28_RS23105 () | 4448251..4452090 | - | 3840 | WP_001528154.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| CCL28_RS23110 () | 4452464..4452988 | + | 525 | WP_000491818.1 | hypothetical protein | - |
| CCL28_RS23115 () | 4453053..4453745 | + | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| CCL28_RS23120 () | 4453778..4456315 | + | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| CCL28_RS23125 () | 4456425..4456697 | - | 273 | WP_000405645.1 | N-acetyltransferase | - |
| CCL28_RS23130 () | 4456709..4456939 | - | 231 | WP_000371715.1 | (4Fe-4S)-binding protein | - |
| CCL28_RS23135 () | 4457120..4458751 | + | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| CCL28_RS23140 () | 4458748..4459467 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|