MGE detailed information
MGE type: Genomic_island MGE length: 48969 bp
Accession: NZ_CP021454 Location: 3738956..3787924 Organism: Escherichia coli strain H105 Replicon: chromosome
Accession: NZ_CP021454 Location: 3738956..3787924 Organism: Escherichia coli strain H105 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCL28_RS19380 () | 3735157..3735744 | + | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
| CCL28_RS19385 () | 3735758..3737230 | + | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| CCL28_RS19390 () | 3737244..3738914 | + | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| CCL28_RS19405 () | 3739999..3740562 | + | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| CCL28_RS19410 () | 3740892..3741686 | + | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| CCL28_RS19415 () | 3741840..3742601 | + | 762 | WP_001213045.1 | protein HyxA | - |
| CCL28_RS19420 () | 3742643..3743719 | + | 1077 | Protein_3579 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| CCL28_RS19425 () | 3743741..3744934 | + | 1194 | WP_072017408.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| CCL28_RS19430 () | 3745118..3745786 | + | 669 | WP_001005267.1 | membrane protein | - |
| CCL28_RS19445 () | 3746029..3746724 | - | 696 | WP_001295803.1 | lactate utilization protein C | - |
| CCL28_RS19450 () | 3746717..3748144 | - | 1428 | WP_001295802.1 | iron-sulfur cluster-binding protein | - |
| CCL28_RS19455 () | 3748155..3748874 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| CCL28_RS19460 () | 3749400..3750254 | - | 855 | WP_001295801.1 | DNA-binding transcriptional regulator RclR | - |
| CCL28_RS19465 () | 3750481..3751806 | + | 1326 | WP_001046304.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| CCL28_RS19470 () | 3751915..3752151 | + | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| CCL28_RS19475 () | 3752163..3752756 | + | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| CCL28_RS19480 () | 3752916..3753785 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| CCL28_RS19485 () | 3754033..3754890 | + | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| CCL28_RS19490 () | 3755015..3759262 | - | 4248 | WP_000092552.1 | Invasin | VF |
| CCL28_RS19495 () | 3759828..3760679 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| CCL28_RS19500 () | 3760706..3761695 | + | 990 | WP_001172283.1 | aldo/keto reductase | - |
| CCL28_RS19505 () | 3761726..3762619 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| CCL28_RS19510 () | 3762819..3763745 | - | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| CCL28_RS19515 () | 3763902..3764822 | + | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| CCL28_RS19520 () | 3764995..3766137 | + | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| CCL28_RS19525 () | 3766610..3766711 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| CCL28_RS19535 () | 3767076..3767339 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| CCL28_RS19540 () | 3767339..3767479 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| CCL28_RS19545 () | 3767549..3767739 | - | 191 | Protein_3601 | hypothetical protein | - |
| CCL28_RS19560 () | 3768563..3769105 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| CCL28_RS19565 () | 3769180..3769767 | + | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| CCL28_RS19570 () | 3769824..3770492 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| CCL28_RS19575 () | 3770518..3773043 | + | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| CCL28_RS19580 () | 3773033..3774676 | + | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| CCL28_RS19585 () | 3774645..3775355 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| CCL28_RS19590 () | 3775662..3775991 | + | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| CCL28_RS19595 () | 3776003..3776166 | - | 164 | Protein_3609 | tail fiber assembly protein | - |
| CCL28_RS19600 () | 3776240..3776854 | - | 615 | WP_001019923.1 | YagU family protein | - |
| CCL28_RS19605 () | 3777069..3777254 | - | 186 | WP_000146240.1 | hypothetical protein | - |
| CCL28_RS27125 () | 3777303..3777461 | + | 159 | Protein_3612 | integrase | - |
| CCL28_RS19615 () | 3777688..3778023 | + | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| CCL28_RS19620 () | 3778231..3779007 | + | 777 | WP_000171155.1 | Prophage integrase IntA ; Integrase | Integrase |
| CCL28_RS19625 () | 3779172..3780092 | - | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| CCL28_RS19630 () | 3780079..3780861 | - | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| CCL28_RS19635 () | 3781145..3784243 | + | 3099 | WP_000673070.1 | type I restriction endonuclease subunit R | - |
| CCL28_RS19640 () | 3784237..3785874 | + | 1638 | WP_000229741.1 | type I restriction-modification system subunit M | - |
| CCL28_RS19645 () | 3785864..3787111 | + | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| CCL28_RS19650 () | 3787291..3787476 | + | 186 | WP_101918754.1 | ash family protein | - |
| CCL28_RS19655 () | 3787454..3787924 | + | 471 | WP_000201175.1 | hypothetical protein | - |
| CCL28_RS27130 () | 3788070..3788273 | + | 204 | Protein_3622 | integrase | - |
| CCL28_RS19675 () | 3788478..3789731 | - | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CCL28_RS19680 () | 3789743..3790846 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CCL28_RS19685 () | 3791135..3792190 | + | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| CCL28_RS19690 () | 3792229..3792630 | - | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|