NZ_CP0212883275773..3465520

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 189748 bp
Accession: NZ_CP021288        Location: 3275773..3465520         Organism: Escherichia coli strain PA45B       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PA45B_RS16925 () 3271482..3273617 - 2136 WP_000839776.1 ornithine decarboxylase -
PA45B_RS27935 () 3273780..3273863 - 84 WP_212734243.1 hypothetical protein -
PA45B_RS16935 () 3274016..3274723 + 708 WP_000234491.1 DUF554 domain-containing protein -
PA45B_RS16945 () 3275102..3276364 + 1263 WP_001218820.1 integrase arm-type DNA-binding domain-containing protein -
PA45B_RS16955 () 3276816..3280331 + 3516 WP_000344112.1 ATP-binding protein -
PA45B_RS27550 () 3280440..3281939 - 1500 WP_001026222.1 phosphoethanolamine transferase -
PA45B_RS16970 () 3282114..3282860 - 747 WP_001350744.1 porin family protein -
PA45B_RS16980 () 3283220..3284230 - 1011 WP_000758686.1 Fimbrial adhesin PapG VF
PA45B_RS16985 () 3284274..3284774 - 501 WP_000620429.1 Minor fimbrial protein PrsF VF
PA45B_RS16990 () 3284849..3285370 - 522 WP_000723802.1 Fimbrial protein PapE VF
PA45B_RS16995 () 3285397..3285933 - 537 WP_000597712.1 Fimbrial adapter PapK VF
PA45B_RS17000 () 3285943..3286524 - 582 WP_000261303.1 hypothetical protein VF
PA45B_RS17005 () 3286561..3287295 - 735 WP_000265730.1 Chaperone protein PapD VF
PA45B_RS17010 () 3287366..3289876 - 2511 WP_000654934.1 Outer membrane usher protein PapC VF
PA45B_RS17015 () 3289935..3290522 - 588 WP_001350743.1 PAP fimbrial minor pilin protein VF
PA45B_RS17020 () 3290585..3291133 - 549 WP_000597759.1 Pap fimbrial major pilin protein VF
PA45B_RS17025 () 3291340..3291654 - 315 WP_000930062.1 Major pilu subunit operon regulatory protein PapB VF
PA45B_RS17040 () 3292086..3292319 + 234 WP_000006207.1 P fimbrial regulatory protein KS71A VF
PA45B_RS17045 () 3292662..3292898 - 237 WP_000958091.1 AlpA family transcriptional regulator -
PA45B_RS17050 () 3292967..3293542 - 576 WP_000991571.1 hypothetical protein -
PA45B_RS17055 () 3293800..3294366 - 567 WP_001126806.1 inovirus-type Gp2 protein -
PA45B_RS17060 () 3294713..3295920 + 1208 Protein_3135 IS3 family transposase ISEc48 Transposase
PA45B_RS17065 () 3295955..3296320 - 366 WP_000639467.1 hypothetical protein -
PA45B_RS17070 () 3296363..3297727 - 1365 WP_000948756.1 Phosphoglycerate transporter protein VF
PA45B_RS17075 () 3298126..3299343 + 1218 WP_001363624.1 phosphoglycerate transport regulator PgtC -
PA45B_RS17080 () 3299340..3301349 + 2010 WP_085447567.1 two-component system sensor histidine kinase PgtB -
PA45B_RS17085 () 3301339..3302586 + 1248 WP_001350739.1 two-component system response regulator PgtA -
PA45B_RS17090 () 3302833..3302946 + 114 Protein_3141 hypothetical protein -
PA45B_RS27805 () 3302978..3303070 + 93 Protein_3142 ATP-dependent helicase -
PA45B_RS17095 () 3303179..3303502 - 324 WP_015953064.1 hypothetical protein -
PA45B_RS17100 () 3303567..3304211 - 645 WP_001332013.1 hypothetical protein -
PA45B_RS17105 () 3304232..3304501 - 270 WP_000226516.1 PerC family transcriptional regulator -
PA45B_RS17110 () 3304580..3305225 - 646 Protein_3146 ParB N-terminal domain-containing protein -
PA45B_RS17115 () 3305210..3306442 - 1233 WP_000999383.1 phosphoadenosine phosphosulfate reductase -
PA45B_RS17120 () 3306578..3307222 - 645 WP_001013662.1 hypothetical protein -
PA45B_RS17125 () 3307416..3308864 - 1449 WP_001332016.1 AAA family ATPase -
PA45B_RS17130 () 3309035..3310197 - 1163 Protein_3150 IS3 family transposase IS629 Transposase
PA45B_RS17135 () 3310249..3311461 + 1213 Protein_3151 IS256 family transposase -
PA45B_RS17140 () 3311641..3313689 - 2049 WP_000792544.1 TonB-dependent siderophore receptor IreA -
PA45B_RS17150 () 3314471..3315211 - 741 WP_001075450.1 inovirus Gp2 family protein -
PA45B_RS27555 () 3315316..3315564 + 249 WP_000573217.1 hypothetical protein -
PA45B_RS17160 () 3316903..3317691 + 789 WP_000816188.1 hypothetical protein -
PA45B_RS17165 () 3317688..3318638 - 951 WP_000157734.1 hypothetical protein -
PA45B_RS17170 () 3318744..3319628 + 885 WP_000010416.1 50S ribosome-binding GTPase -
PA45B_RS17175 () 3319831..3320511 + 681 WP_001282927.1 WYL domain-containing protein -
PA45B_RS17180 () 3320659..3321336 + 678 WP_021518212.1 hypothetical protein -
PA45B_RS17185 () 3321342..3321575 + 234 WP_001278287.1 DUF905 family protein -
PA45B_RS17190 () 3321665..3322483 + 819 WP_001175142.1 DUF945 domain-containing protein -
PA45B_RS17195 () 3322574..3323059 + 486 WP_000860055.1 antirestriction protein -
PA45B_RS17205 () 3323074..3323550 + 477 WP_001186756.1 RadC family protein -
PA45B_RS17210 () 3323619..3323840 + 222 WP_000692312.1 DUF987 domain-containing protein -
PA45B_RS17215 () 3323919..3324296 + 378 WP_015953067.1 type IV toxin-antitoxin system toxin CbtA Antitoxin Detail
PA45B_RS17220 () 3324343..3324720 + 378 WP_001094436.1 TA system toxin CbtA family protein Toxin Detail
PA45B_RS17225 () 3324717..3325205 + 489 WP_000761714.1 hypothetical protein -
PA45B_RS17230 () 3325217..3325414 + 198 WP_000839254.1 DUF957 domain-containing protein -
PA45B_RS17235 () 3325499..3326344 + 846 WP_001280513.1 DUF4942 domain-containing protein -
PA45B_RS17240 () 3326415..3327950 + 1536 WP_000492897.1 Cyclic di-GMP phosphodiesterase PdeL VF
PA45B_RS17245 () 3328347..3328517 + 171 Protein_3171 IS110 family transposase ISEc32 Transposase
PA45B_RS17250 () 3329327..3330310 + 984 WP_001331698.1 Arabinose 5-phosphate isomerase KpsF VF
PA45B_RS17255 () 3330382..3331530 + 1149 WP_000905916.1 hypothetical protein VF
PA45B_RS17260 () 3331554..3333230 + 1677 WP_001331697.1 Polysialic acid transport protein KpsD VF
PA45B_RS17265 () 3333240..3333980 + 741 WP_000030755.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
PA45B_RS17270 () 3333977..3336004 + 2028 WP_000579525.1 hypothetical protein VF
PA45B_RS17275 () 3336039..3337244 + 1206 WP_001161829.1 hypothetical protein VF
PA45B_RS17280 () 3337394..3338623 - 1230 WP_000575410.1 hypothetical protein VF
PA45B_RS17285 () 3338613..3339761 - 1149 WP_000197083.1 hypothetical protein VF
PA45B_RS17290 () 3339754..3340929 - 1176 WP_000723250.1 Polysialic acid biosynthesis protein P7 VF
PA45B_RS17295 () 3340926..3342182 - 1257 WP_001259305.1 N-acylneuraminate cytidylyltransferase VF
PA45B_RS17300 () 3342182..3343222 - 1041 WP_000066003.1 N,N'-diacetyllegionaminic acid synthase VF
PA45B_RS17305 () 3343219..3343842 - 624 WP_000038461.1 Putative acetyltransferase EpsM VF
PA45B_RS17310 () 3343892..3344551 - 660 WP_000590258.1 Polysialic acid transport ATP-binding protein KpsT VF
PA45B_RS17315 () 3344548..3345324 - 777 WP_000124301.1 Polysialic acid transport protein KpsM VF
PA45B_RS17320 () 3346382..3346918 - 537 WP_000942829.1 Type II secretion system protein M VF
PA45B_RS17325 () 3346920..3348098 - 1179 WP_000097208.1 Type II secretion system protein L VF
PA45B_RS17330 () 3348095..3349072 - 978 WP_000633202.1 Putative type II secretion system protein K VF
PA45B_RS17335 () 3349069..3349674 - 606 WP_001331694.1 Type II secretion system protein J VF
PA45B_RS17340 () 3349671..3350042 - 372 WP_000820096.1 Type II secretion system protein I VF
PA45B_RS17345 () 3350039..3350602 - 564 WP_001115118.1 Type II secretion system protein H VF
PA45B_RS17350 () 3350606..3351061 - 456 WP_001087289.1 Type II secretion system protein G VF
PA45B_RS17355 () 3351078..3352301 - 1224 WP_001173408.1 Type II secretion system protein F VF
PA45B_RS17360 () 3352301..3353794 - 1494 WP_000249340.1 Type II secretion system protein E VF
PA45B_RS17365 () 3353794..3355854 - 2061 WP_001350731.1 Type II secretion system protein D VF
PA45B_RS17370 () 3355884..3356843 - 960 WP_001350730.1 Type II secretion system protein C VF
PA45B_RS17375 () 3356861..3357271 - 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
PA45B_RS17380 () 3357337..3358146 - 810 WP_000895874.1 Leader peptidase PppA VF
PA45B_RS17390 () 3358310..3362872 - 4563 WP_001034562.1 hypothetical protein VF
PA45B_RS17400 () 3363356..3365038 - 1683 WP_000634064.1 glycolate permease GlcA -
PA45B_RS17405 () 3365394..3367565 - 2172 WP_000084100.1 malate synthase G -
PA45B_RS17410 () 3367587..3367991 - 405 WP_000853256.1 protein GlcG -
PA45B_RS17415 () 3367996..3369219 - 1224 WP_001194819.1 glycolate oxidase subunit GlcF -
PA45B_RS17420 () 3369230..3370282 - 1053 WP_000943075.1 glycolate oxidase subunit GlcE -
PA45B_RS17425 () 3370282..3371781 - 1500 WP_000026154.1 glycolate oxidase subunit GlcD -
PA45B_RS17430 () 3372032..3372796 + 765 WP_001314155.1 transcriptional regulator GlcC -
PA45B_RS17435 () 3372803..3373945 - 1143 WP_001331688.1 DNA-binding protein -
PA45B_RS17440 () 3374316..3376040 + 1725 WP_011703666.1 Long-chain-fatty-acid--AMP ligase FadD26 VF
PA45B_RS17445 () 3376037..3376951 + 915 WP_001077159.1 NAD-dependent epimerase/dehydratase family protein -
PA45B_RS17450 () 3376983..3377231 + 249 WP_000248098.1 acyl carrier protein -
PA45B_RS17455 () 3377231..3378403 + 1173 WP_000524959.1 8-amino-7-oxononanoate synthase VF
PA45B_RS17460 () 3378438..3379517 - 1080 WP_001331686.1 LPS export ABC transporter permease LptG -
PA45B_RS17465 () 3379514..3380584 - 1071 WP_000779629.1 LPS export ABC transporter permease LptF -
PA45B_RS17470 () 3380615..3381175 - 561 WP_001141149.1 YtfJ family protein -
PA45B_RS17475 () 3381175..3382011 - 837 WP_000984967.1 hypothetical protein -
PA45B_RS17480 () 3382011..3383360 - 1350 WP_000257922.1 lipopolysaccharide biosynthesis protein -
PA45B_RS17485 () 3383406..3384164 - 759 WP_001445422.1 hypothetical protein -
PA45B_RS17490 () 3384196..3384909 - 714 WP_001076282.1 thymidylate kinase -
PA45B_RS17495 () 3385084..3385776 + 693 WP_001190683.1 thymidylate kinase -
PA45B_RS17500 () 3385825..3387324 - 1500 WP_000933275.1 inorganic phosphate transporter PitB -
PA45B_RS17505 () 3387616..3389475 - 1860 WP_001331684.1 bifunctional glutathionylspermidine amidase/synthase -
PA45B_RS17510 () 3389680..3390546 + 867 WP_095591294.1 glutathione-dependent disulfide-bond oxidoreductase -
PA45B_RS17515 () 3390679..3390927 - 249 WP_000334896.1 hydrogenase maturation factor HybG -
PA45B_RS17520 () 3390940..3391281 - 342 WP_000544952.1 hydrogenase maturation nickel metallochaperone HypA -
PA45B_RS17525 () 3391274..3391762 - 489 WP_000134031.1 hydrogenase-2 assembly chaperone -
PA45B_RS17530 () 3391755..3392249 - 495 WP_001221940.1 HyaD/HybD family hydrogenase maturation endopeptidase -
PA45B_RS17535 () 3392249..3393952 - 1704 WP_000083065.1 hydrogenase 2 large subunit -
PA45B_RS17540 () 3393949..3395127 - 1179 WP_000017687.1 Ni/Fe-hydrogenase cytochrome b subunit -
PA45B_RS17545 () 3395117..3396103 - 987 WP_001081889.1 hydrogenase 2 operon protein HybA -
PA45B_RS17550 () 3396106..3397224 - 1119 WP_000145410.1 hydrogenase 2 small subunit -
PA45B_RS17560 () 3397413..3397700 - 288 WP_001059136.1 DUF2623 domain-containing protein -
PA45B_RS17565 () 3397819..3398706 - 888 WP_001350729.1 dienelactone hydrolase family protein -
PA45B_RS17570 () 3398863..3399903 + 1041 WP_000262190.1 L-glyceraldehyde 3-phosphate reductase -
PA45B_RS17575 () 3399943..3400437 - 495 WP_000439331.1 TIGR00645 family protein -
PA45B_RS17580 () 3400628..3401512 + 885 WP_000018758.1 putative oxidoreductase YghA VF
PA45B_RS17585 () 3401551..3401976 - 426 WP_001240712.1 TonB system transport protein ExbD -
PA45B_RS17590 () 3401983..3402717 - 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
PA45B_RS17600 () 3402969..3404156 + 1188 WP_000763935.1 cystathionine beta-lyase -
PA45B_RS17605 () 3404296..3404955 + 660 WP_000268419.1 DedA family protein -
PA45B_RS17610 () 3404995..3405894 - 900 WP_157727997.1 DNA-binding transcriptional regulator YqhC -
PA45B_RS17615 () 3406088..3407251 + 1164 WP_001058819.1 alcohol dehydrogenase -
PA45B_RS17620 () 3407356..3408183 + 828 WP_000013152.1 2,5-didehydrogluconate reductase DkgA -
PA45B_RS17625 () 3408383..3409309 + 927 WP_000691616.1 YbjP/YqhG family protein -
PA45B_RS17630 () 3409360..3409617 + 258 WP_000848521.1 lipoprotein YqhH -
PA45B_RS17635 () 3409659..3411878 - 2220 WP_000095186.1 YgiQ family radical SAM protein -
PA45B_RS17640 () 3412130..3412879 + 750 WP_000438655.1 FadR family transcriptional regulator -
PA45B_RS17645 () 3413202..3414674 + 1473 WP_001331680.1 mannitol dehydrogenase family protein -
PA45B_RS17650 () 3414671..3415687 + 1017 WP_000853926.1 zinc-binding alcohol dehydrogenase family protein -
PA45B_RS17655 () 3415698..3416708 + 1011 WP_000214536.1 putative oxidoreductase YjmC VF
PA45B_RS17660 () 3416781..3417764 + 984 WP_000645959.1 TRAP transporter substrate-binding protein -
PA45B_RS17665 () 3417806..3418288 + 483 WP_001259754.1 TRAP transporter small permease -
PA45B_RS17670 () 3418299..3419603 + 1305 WP_001298381.1 TRAP transporter large permease subunit -
PA45B_RS17675 () 3419674..3421086 - 1413 WP_000059395.1 cell division protein FtsP -
PA45B_RS17680 () 3421161..3421898 - 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
PA45B_RS17685 () 3422133..3424391 - 2259 WP_001281888.1 DNA topoisomerase IV subunit A -
PA45B_RS17690 () 3424529..3426136 - 1608 WP_001350728.1 ABC transporter substrate-binding protein -
PA45B_RS17695 () 3426245..3426727 - 483 WP_000183493.1 GyrI-like domain-containing protein -
PA45B_RS17700 () 3426780..3427172 - 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
PA45B_RS17705 () 3427324..3427983 + 660 WP_001221493.1 Transcriptional regulatory protein QseB VF
PA45B_RS17710 () 3427980..3429329 + 1350 WP_000673382.1 two-component system sensor histidine kinase QseC -
PA45B_RS17715 () 3429375..3429707 - 333 WP_000914696.1 DUF2645 family protein -
PA45B_RS17720 () 3429714..3430906 - 1193 Protein_3262 Hcp family type VI secretion system effector -
PA45B_RS17725 () 3431156..3431737 + 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
PA45B_RS17730 () 3431768..3432082 + 315 WP_000633738.1 antibiotic biosynthesis monooxygenase -
PA45B_RS17735 () 3432127..3433014 - 888 WP_000614943.1 MurR/RpiR family transcriptional regulator -
PA45B_RS17740 () 3433011..3433958 - 948 WP_001296418.1 iron-siderophore ABC transporter substrate-binding protein -
PA45B_RS17745 () 3433969..3435006 - 1038 WP_001298372.1 Iron-uptake system permease protein FeuC VF
PA45B_RS17750 () 3435015..3435998 - 984 WP_000986428.1 putative siderophore transport system permease protein YfiZ VF
PA45B_RS17755 () 3435995..3436804 - 810 WP_000940869.1 putative siderophore transport system ATP-binding protein YusV VF
PA45B_RS17760 () 3437178..3439319 + 2142 WP_001240663.1 TonB-dependent siderophore receptor -
PA45B_RS17765 () 3439383..3441275 - 1893 WP_000195274.1 DNA topoisomerase IV subunit B -
PA45B_RS17770 () 3441304..3441885 - 582 WP_000105733.1 esterase YqiA -
PA45B_RS17775 () 3441885..3442712 - 828 WP_000444744.1 3',5'-cyclic-AMP phosphodiesterase -
PA45B_RS17780 () 3442737..3443159 - 423 WP_000833393.1 DUF1249 family protein -
PA45B_RS17785 () 3443160..3443789 - 630 WP_000917117.1 ADP-ribose diphosphatase -
PA45B_RS17790 () 3443994..3445475 + 1482 WP_000735289.1 outer membrane channel protein TolC -
PA45B_RS17800 () 3445623..3446294 + 672 WP_000831543.1 DUF1190 family protein -
PA45B_RS17805 () 3446300..3447460 + 1161 WP_000442855.1 glutathionylspermidine synthase family protein -
PA45B_RS17810 () 3447945..3449741 + 1797 WP_000459865.1 aryl-sulfate sulfotransferase -
PA45B_RS17815 () 3449759..3450427 + 669 WP_000040022.1 thiol:disulfide interchange protein DsbA/DsbL -
PA45B_RS17820 () 3450442..3451113 + 672 WP_000511506.1 protein-disulfide oxidoreductase DsbI -
PA45B_RS17825 () 3451159..3451947 - 789 WP_001351039.1 4,5-DOPA dioxygenase extradiol -
PA45B_RS17830 () 3452090..3452863 + 774 WP_001295627.1 zinc transporter ZupT -
PA45B_RS17835 () 3452925..3453095 - 171 WP_001296421.1 hypothetical protein -
PA45B_RS17840 () 3453666..3454229 + 564 WP_000915007.1 putative fimbrial-like protein YbgD VF
PA45B_RS17845 () 3454316..3456838 + 2523 WP_001060674.1 Outer membrane usher protein PapC VF
PA45B_RS17850 () 3456854..3457594 + 741 WP_001351038.1 putative fimbrial chaperone YfcS VF
PA45B_RS17855 () 3457591..3458640 + 1050 WP_000631271.1 pilus protein -
PA45B_RS17860 () 3458694..3459347 - 654 WP_001076989.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
PA45B_RS17865 () 3459721..3460020 + 300 WP_001314168.1 ubiquinone biosynthesis accessory factor UbiK -
PA45B_RS17870 () 3460055..3460255 - 201 WP_001296424.1 cell surface composition regulator GlgS -
PA45B_RS17875 () 3460525..3461154 + 630 WP_000599932.1 DUF1449 family protein -
PA45B_RS17880 () 3461181..3462842 + 1662 WP_001298380.1 flotillin family protein -
- () 3463040..3463181 - 142 NuclAT_0 - -
- () 3463040..3463181 - 142 NuclAT_0 - -
- () 3463040..3463181 - 142 NuclAT_0 - -
- () 3463040..3463181 - 142 NuclAT_0 - -
PA45B_RS27560 () 3463082..3463141 + 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
PA45B_RS17890 () 3463261..3464694 - 1434 WP_000869177.1 Bifunctional protein HldE VF
PA45B_RS17895 () 3464742..3467582 - 2841 WP_001331677.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase -
PA45B_RS17900 () 3467605..3468906 - 1302 WP_095591296.1 inorganic triphosphatase -
PA45B_RS17910 () 3469148..3469768 + 621 WP_001125331.1 SH3 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance