MGE detailed information
MGE type: Genomic_island MGE length: 18396 bp
Accession: NZ_CP021288 Location: 1574922..1593317 Organism: Escherichia coli strain PA45B Replicon: chromosome
Accession: NZ_CP021288 Location: 1574922..1593317 Organism: Escherichia coli strain PA45B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA45B_RS08260 () | 1570536..1572908 | - | 2373 | WP_000832485.1 | TonB-dependent receptor plug domain-containing protein | - |
| PA45B_RS08265 () | 1572946..1574631 | - | 1686 | WP_001304373.1 | ABC transporter ATP-binding protein/permease | - |
| PA45B_RS27425 () | 1574831..1574956 | + | 126 | WP_122083086.1 | hypothetical protein | - |
| PA45B_RS08270 () | 1574922..1576079 | - | 1158 | WP_001362857.1 | anaerobic sulfatase maturase | - |
| PA45B_RS08275 () | 1576131..1577813 | - | 1683 | WP_001296072.1 | sulfatase | - |
| PA45B_RS08280 () | 1578215..1578976 | - | 762 | WP_000060455.1 | acid stress response transcriptional regulator YdeO | - |
| PA45B_RS08285 () | 1579051..1579248 | - | 198 | WP_000543391.1 | two-component system connector SafA | - |
| PA45B_RS08290 () | 1579496..1581775 | - | 2280 | WP_000726723.1 | acid resistance putative oxidoreductase YdeP | - |
| PA45B_RS08295 () | 1582114..1583028 | - | 915 | WP_000520594.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| PA45B_RS08300 () | 1583088..1583591 | - | 504 | WP_000825468.1 | Protein FimG | VF |
| PA45B_RS08305 () | 1583604..1584134 | - | 531 | WP_000876778.1 | Protein FimF | VF |
| PA45B_RS08310 () | 1584148..1586055 | - | 1908 | Protein_1525 | Outer membrane usher protein FimD | VF |
| PA45B_RS08320 () | 1587389..1588135 | - | 747 | Protein_1527 | Outer membrane usher protein FimD | VF |
| PA45B_RS08325 () | 1588177..1588887 | - | 711 | WP_001195181.1 | Chaperone protein FocC | VF |
| PA45B_RS08330 () | 1589249..1589812 | - | 564 | WP_001296074.1 | Type-1 fimbrial protein, A chain | VF |
| PA45B_RS08335 () | 1590588..1591193 | - | 606 | Protein_1530 | SDR family oxidoreductase | - |
| PA45B_RS08340 () | 1591213..1591470 | + | 258 | WP_001210030.1 | hypothetical protein | - |
| PA45B_RS08350 () | 1591729..1593051 | - | 1323 | WP_001125475.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| PA45B_RS08355 () | 1593051..1593317 | - | 267 | WP_001332145.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| PA45B_RS08360 () | 1593625..1594383 | + | 759 | WP_001286588.1 | trans-aconitate 2-methyltransferase | - |
| PA45B_RS08365 () | 1594387..1595301 | - | 915 | WP_001306069.1 | bestrophin family protein | - |
| PA45B_RS08375 () | 1595498..1596949 | - | 1452 | WP_000854637.1 | tagaturonate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|