MGE detailed information
MGE type: Conjugative plasmid MGE length: 86725 bp
Accession: NZ_CP021208 Location: 1..86725 Organism: Escherichia coli strain strain Z247 Replicon: plasmid p2474-3
Accession: NZ_CP021208 Location: 1..86725 Organism: Escherichia coli strain strain Z247 Replicon: plasmid p2474-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA270_RS25760 () | 1682..2148 | - | 467 | Protein_1 | Phospholipase D | VF |
| CA270_RS25770 () | 2531..3679 | - | 1149 | WP_001024971.1 | putative protein YggR | VF |
| CA270_RS25775 () | 3676..4494 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| CA270_RS25780 () | 4491..4949 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| CA270_RS25785 () | 5343..5927 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| CA270_RS25790 () | 5987..7189 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| CA270_RS25795 () | 7274..8098 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| CA270_RS25800 () | 8249..9403 | - | 1155 | WP_001139957.1 | integrase | - |
| CA270_RS25830 () | 10779..11037 | + | 259 | Protein_9 | prepilin | - |
| CA270_RS25835 () | 11030..12447 | - | 1418 | Protein_10 | hypothetical protein | VF |
| CA270_RS25840 () | 12447..13103 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| CA270_RS25845 () | 13088..13648 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| CA270_RS25850 () | 13658..14272 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| CA270_RS25855 () | 14290..15387 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CA270_RS25860 () | 15400..16953 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CA270_RS25865 () | 16964..17416 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| CA270_RS25870 () | 17403..18698 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| CA270_RS25875 () | 18691..20373 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| CA270_RS25880 () | 20387..20824 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| CA270_RS25885 () | 20824..21890 | - | 1067 | Protein_20 | hypothetical protein | VF |
| CA270_RS25900 () | 22564..23016 | - | 453 | WP_001535696.1 | hypothetical protein | - |
| CA270_RS25905 () | 23059..23313 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| CA270_RS25910 () | 23581..24147 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| CA270_RS25915 () | 24161..24844 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| CA270_RS25925 () | 25098..25631 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| CA270_RS25935 () | 26073..26360 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CA270_RS25940 () | 26278..26541 | - | 264 | WP_001324596.1 | ash family protein | - |
| CA270_RS25955 () | 27514..28545 | + | 1032 | WP_000907873.1 | replication initiation protein | - |
| CA270_RS28810 () | 29241..29381 | + | 141 | WP_032072206.1 | hypothetical protein | - |
| CA270_RS25970 () | 29614..30123 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| CA270_RS25975 () | 30179..30781 | - | 603 | WP_001703912.1 | hypothetical protein | - |
| CA270_RS25985 () | 31336..32598 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| CA270_RS25990 () | 32854..33729 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| CA270_RS25995 () | 33776..34108 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| CA270_RS26000 () | 34063..35457 | + | 1395 | WP_023150520.1 | hypothetical protein | - |
| CA270_RS28815 () | 35980..36282 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| CA270_RS26010 () | 36279..36905 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| CA270_RS26015 () | 37101..38372 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| CA270_RS26020 () | 38372..38809 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CA270_RS26025 () | 38806..39054 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CA270_RS26035 () | 39472..40374 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| CA270_RS26040 () | 40469..40804 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| CA270_RS26045 () | 41142..42122 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| CA270_RS26050 () | 42125..42547 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| CA270_RS26055 () | 42551..42862 | + | 312 | WP_033863049.1 | hypothetical protein | - |
| CA270_RS26060 () | 42938..43621 | + | 684 | WP_000086127.1 | DNA methylase | - |
| CA270_RS26065 () | 43622..43843 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| CA270_RS26070 () | 43857..44291 | + | 435 | WP_000274484.1 | DUF1380 family protein | - |
| CA270_RS26075 () | 44336..45106 | + | 771 | WP_012783922.1 | hypothetical protein | - |
| CA270_RS26085 () | 45642..45944 | + | 303 | WP_014653258.1 | antirestriction protein | - |
| CA270_RS26090 () | 45991..46413 | + | 423 | WP_000271703.1 | DUF1380 family protein | - |
| CA270_RS26095 () | 46410..46601 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| CA270_RS26105 () | 46739..47002 | + | 264 | WP_158213465.1 | hypothetical protein | - |
| CA270_RS26115 () | 47386..47913 | + | 528 | WP_012783926.1 | single-stranded DNA-binding protein | - |
| CA270_RS26120 () | 47971..48204 | + | 234 | WP_015508350.1 | DUF905 domain-containing protein | - |
| CA270_RS26125 () | 48263..50221 | + | 1959 | WP_063267868.1 | ParB/RepB/Spo0J family partition protein | - |
| CA270_RS26130 () | 50274..50708 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| CA270_RS26135 () | 50705..51424 | + | 720 | WP_012783927.1 | plasmid SOS inhibition protein A | - |
| CA270_RS26140 () | 51421..52017 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| CA270_RS26150 () | 52479..52979 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| CA270_RS26165 () | 53708..54142 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| CA270_RS26170 () | 54236..54502 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| CA270_RS26175 () | 54679..55068 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| CA270_RS26180 () | 55065..55967 | + | 903 | WP_023150544.1 | Recombination-promoting nuclease RpnA | VF |
| CA270_RS26185 () | 56029..56235 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| CA270_RS26190 () | 56266..56517 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CA270_RS26195 () | 56551..56748 | - | 198 | WP_001161106.1 | hypothetical protein | - |
| CA270_RS26205 () | 57097..57945 | + | 849 | WP_012783929.1 | DUF4942 domain-containing protein | - |
| CA270_RS26210 () | 58031..58366 | - | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CA270_RS26215 () | 58600..58932 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CA270_RS26220 () | 58943..61642 | + | 2700 | WP_012783930.1 | Protein TraI | Relaxase |
| CA270_RS26225 () | 61679..63970 | - | 2292 | WP_012783931.1 | hypothetical protein | - |
| CA270_RS26230 () | 63963..65033 | - | 1071 | WP_012783932.1 | IncI1-type conjugal transfer protein TrbB | - |
| CA270_RS26235 () | 65052..66260 | - | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 66440..66497 | - | 58 | NuclAT_1 | - | - |
| - () | 66440..66497 | - | 58 | NuclAT_1 | - | - |
| - () | 66440..66497 | - | 58 | NuclAT_1 | - | - |
| - () | 66440..66497 | - | 58 | NuclAT_1 | - | - |
| CA270_RS26240 () | 66567..67658 | - | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 67861..67921 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 67861..67921 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 67861..67921 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 67861..67921 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| CA270_RS26245 () | 67973..68125 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| CA270_RS26250 () | 68197..68448 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| CA270_RS26255 () | 68748..69044 | + | 297 | WP_011264046.1 | hypothetical protein | - |
| CA270_RS28820 () | 69109..69285 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| CA270_RS26260 () | 69677..69886 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| CA270_RS26265 () | 69958..70620 | - | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CA270_RS26270 () | 70691..72858 | - | 2168 | Protein_82 | DotA/TraY family protein | - |
| CA270_RS26275 () | 72955..73539 | - | 585 | WP_012783937.1 | conjugal transfer protein TraX | - |
| CA270_RS26280 () | 73568..74770 | - | 1203 | WP_012783938.1 | IncI1-type conjugal transfer protein TraW | - |
| CA270_RS26285 () | 74737..75351 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| CA270_RS26290 () | 75351..78395 | - | 3045 | WP_012783939.1 | IncI1-type conjugal transfer protein TraU | - |
| CA270_RS26295 () | 78485..79285 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CA270_RS26300 () | 79269..79457 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CA270_RS26305 () | 79521..79925 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| CA270_RS26310 () | 79976..80503 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CA270_RS26315 () | 80503..81207 | - | 705 | WP_086353227.1 | IncI1-type conjugal transfer protein TraP | - |
| CA270_RS26320 () | 81207..82496 | - | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| CA270_RS26325 () | 82499..83482 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| CA270_RS26330 () | 83493..84185 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CA270_RS26335 () | 84182..84529 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|