MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 44306 bp
Accession: NZ_CP021013 Location: 1..44306 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 Replicon: plasmid pA
Accession: NZ_CP021013 Location: 1..44306 Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XcfCFBP7767P_RS22370 (XcfCFBP7767P_23655) | 1..591 | + | 591 | WP_048481488.1 | Type IV secretion system protein virB1 | VF |
| XcfCFBP7767P_RS22375 (XcfCFBP7767P_23660) | 890..3844 | + | 2955 | WP_022557745.1 | hypothetical protein | Relaxase |
| XcfCFBP7767P_RS23090 | 3849..5900 | + | 2052 | WP_022557744.1 | Conjugal transfer protein TraG | VF |
| XcfCFBP7767P_RS22385 (XcfCFBP7767P_23670) | 5897..6406 | + | 510 | WP_022557743.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22390 (XcfCFBP7767P_23675) | 6420..6959 | + | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP7767P_RS22395 (XcfCFBP7767P_23680) | 7125..7409 | - | 285 | WP_017154819.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22400 (XcfCFBP7767P_23685) | 7739..8185 | + | 447 | WP_022557741.1 | avidin/streptavidin family protein | - |
| XcfCFBP7767P_RS22405 (XcfCFBP7767P_23690) | 8652..9041 | + | 390 | WP_022557740.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22410 (XcfCFBP7767P_23695) | 9427..10516 | + | 1090 | Protein_9 | IS3 family transposase ISXac2 | Transposase |
| XcfCFBP7767P_RS22415 (XcfCFBP7767P_23700) | 10609..10860 | + | 252 | WP_022557739.1 | type IV secretion system protein | - |
| XcfCFBP7767P_RS22420 (XcfCFBP7767P_23705) | 10887..11348 | + | 462 | Protein_11 | P-type conjugative transfer protein TrbG | - |
| XcfCFBP7767P_RS22425 (XcfCFBP7767P_23710) | 11413..12393 | + | 981 | WP_007975311.1 | IS5 family transposase ISXfu2 | Transposase |
| XcfCFBP7767P_RS22430 (XcfCFBP7767P_23715) | 12504..13040 | + | 537 | Protein_13 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| XcfCFBP7767P_RS22435 (XcfCFBP7767P_23720) | 13056..14408 | + | 1353 | WP_022557738.1 | TrbI/VirB10 family protein | - |
| XcfCFBP7767P_RS22440 (XcfCFBP7767P_23725) | 14479..14787 | + | 309 | WP_223842595.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22445 (XcfCFBP7767P_23730) | 14798..15037 | + | 240 | WP_005997461.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22450 (XcfCFBP7767P_23735) | 15110..15358 | + | 249 | WP_033481882.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22455 (XcfCFBP7767P_23740) | 15360..16214 | + | 855 | WP_022557737.1 | DNA topoisomerase | - |
| XcfCFBP7767P_RS22460 (XcfCFBP7767P_23745) | 16589..17908 | + | 1320 | WP_022557736.1 | right-handed parallel beta-helix repeat-containing protein | - |
| XcfCFBP7767P_RS22465 (XcfCFBP7767P_24660) | 18035..19327 | + | 1293 | WP_033481893.1 | M12 family metallo-peptidase | - |
| XcfCFBP7767P_RS22470 (XcfCFBP7767P_23755) | 19482..20030 | + | 549 | WP_022557734.1 | DNA topoisomerase | - |
| XcfCFBP7767P_RS22475 (XcfCFBP7767P_23760) | 20079..20216 | + | 138 | Protein_22 | IS3 family transposase ISXcd1 | Transposase |
| XcfCFBP7767P_RS22480 (XcfCFBP7767P_23765) | 20291..20845 | - | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| XcfCFBP7767P_RS22485 (XcfCFBP7767P_23505) | 20859..21275 | - | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XcfCFBP7767P_RS22490 (XcfCFBP7767P_23510) | 21272..21526 | - | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| XcfCFBP7767P_RS22495 (XcfCFBP7767P_23515) | 21738..21983 | + | 246 | Protein_26 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XcfCFBP7767P_RS22500 (XcfCFBP7767P_23520) | 22020..23246 | - | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| XcfCFBP7767P_RS22505 (XcfCFBP7767P_23525) | 23380..24432 | - | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| XcfCFBP7767P_RS23155 | 24495..24680 | - | 186 | Protein_29 | avirulence protein | - |
| XcfCFBP7767P_RS22515 (XcfCFBP7767P_23535) | 25354..26268 | + | 915 | WP_022557729.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22520 (XcfCFBP7767P_23540) | 26261..27118 | + | 858 | WP_033481873.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| XcfCFBP7767P_RS22525 (XcfCFBP7767P_24670) | 27297..27758 | + | 462 | WP_039731445.1 | hypothetical protein | - |
| XcfCFBP7767P_RS23095 | 27799..28365 | + | 567 | WP_022557726.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22540 (XcfCFBP7767P_23555) | 28424..28987 | + | 564 | WP_223842594.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22545 (XcfCFBP7767P_23560) | 29024..29632 | - | 609 | WP_022557724.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22550 (XcfCFBP7767P_23575) | 30954..31277 | + | 324 | WP_022557721.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22555 (XcfCFBP7767P_23580) | 31837..32112 | + | 276 | WP_022557719.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22560 (XcfCFBP7767P_23585) | 32691..33089 | + | 399 | WP_039731964.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22565 (XcfCFBP7767P_23590) | 33216..33587 | + | 372 | WP_022557717.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22570 (XcfCFBP7767P_23595) | 33654..37670 | - | 4017 | WP_099800836.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| XcfCFBP7767P_RS22575 (XcfCFBP7767P_23605) | 37927..38199 | + | 273 | WP_022557754.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22580 (XcfCFBP7767P_23610) | 38251..38478 | + | 228 | WP_022557753.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22585 (XcfCFBP7767P_23615) | 38706..39050 | + | 345 | WP_022557752.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22590 (XcfCFBP7767P_23620) | 39162..39746 | + | 585 | WP_022557751.1 | DUF6012 family protein | - |
| XcfCFBP7767P_RS22595 (XcfCFBP7767P_23625) | 40100..40921 | + | 822 | WP_022557750.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22600 (XcfCFBP7767P_23635) | 41939..42577 | + | 639 | WP_017162872.1 | ParA family partition ATPase | - |
| XcfCFBP7767P_RS22605 (XcfCFBP7767P_23640) | 42574..42909 | + | 336 | WP_022557749.1 | hypothetical protein | - |
| XcfCFBP7767P_RS22610 (XcfCFBP7767P_23645) | 43249..43713 | + | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|